期刊
NUCLEIC ACIDS RESEARCH
卷 46, 期 W1, 页码 W503-W509出版社
OXFORD UNIV PRESS
DOI: 10.1093/nar/gky466
关键词
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资金
- European Union [306000-STATegra]
- Marie Curie International Research Staff Exchange Scheme [612583-DEANN]
- Spanish MINECO [BIO2012-40244]
- INB Grant [PT17/0009/0015 - ISCIII-SGEFI / ERDF]
The increasing availability of multi-omic platforms poses new challenges to data analysis. Joint visualization of multi-omics data is instrumental in better understanding interconnections across molecular layers and in fully utilizing the multi-omic resources available to make biological discoveries. We present here PaintOmics 3, a web-based resource for the integrated visualization of multiple omic data types onto KEGG pathway diagrams. PaintOmics 3 combines server-end capabilities for data analysis with the potential of modern web resources for data visualization, providing researchers with a powerful framework for interactive exploration of their multi-omics information. Unlike other visualization tools, PaintOmics 3 covers a comprehensive pathway analysis workflow, including automatic feature name/identifier conversion, multi-layered feature matching, pathway enrichment, network analysis, interactive heatmaps, trend charts, and more. It accepts a wide variety of omic types, including transcriptomics, proteomics and metabolomics, as well as region-based approaches such as ATAC-seq or ChIP-seq data. The tool is freely available at www.paintomics.org
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