4.8 Article

Freiburg RNA tools: a central online resource for RNA-focused research and teaching

期刊

NUCLEIC ACIDS RESEARCH
卷 46, 期 W1, 页码 W25-W29

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OXFORD UNIV PRESS
DOI: 10.1093/nar/gky329

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  1. Bundesministerium fur Bildung und Forschung [031A538A RBC, 031L0106B]
  2. Deutsche Forschungsgemeinschaft [BA 2168/14-1, BA 2168/16-1]

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The Freiburg RNA tools webserver is a well established online resource for RNA-focused research. It provides a unified user interface and comprehensive result visualization for efficient command line tools. The webserver includes RNA-RNA interaction prediction (IntaRNA, CopraRNA, metaMIR), sRNA homology search (GLASSgo), sequence-structure alignments (LocARNA, MARNA, CARNA, ExpaRNA), CRISPR repeat classification (CRISPRmap), sequence design (antaRNA, INFO-RNA, SECISDesign), structure aberration evaluation of point mutations (RaSE), and RNA/protein-family models visualization (CMV), and other methods. Open education resources offer interactive visualizations of RNA structure and RNA-RNA interaction prediction as well as basic and advanced sequence alignment algorithms. The services are freely available at http://rna. informatik.uni-freiburg.de.

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