相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。A dynamic microbial community with high functional redundancy inhabits the cold, oxic subseafloor aquifer
Benjamin J. Tully et al.
ISME JOURNAL (2018)
Control on rate and pathway of anaerobic organic carbon degradation in the seabed
F. Beulig et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Predicted microbial secretomes and their target substrates in marine sediment
William D. Orsi et al.
NATURE MICROBIOLOGY (2018)
Metagenomes from deep Baltic Sea sediments reveal how past and present environmental conditions determine microbial community composition
Ian P. G. Marshall et al.
MARINE GENOMICS (2018)
Labilibaculum manganireducens gen. nov., sp.nov and Labilibaculum filiforme sp.nov., Novel Bacteroidetes Isolated from Subsurface Sediments of the Baltic Sea
Verona Vandieken et al.
FRONTIERS IN MICROBIOLOGY (2018)
Necromass as a Limited Source of Energy for Microorganisms in Marine Sediments
James A. Bradley et al.
JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2018)
Microbial community composition along a 50 000-year lacustrine sediment sequence
Aurele Vuillemin et al.
FEMS MICROBIOLOGY ECOLOGY (2018)
Cellulosomes: bacterial nanomachines for dismantling plant polysaccharides
Lior Artzi et al.
NATURE REVIEWS MICROBIOLOGY (2017)
Exploration of cultivable fungal communities in deep coal-bearing sediments from ∼1.3 to 2.5 km below the ocean floor
Chang-Hong Liu et al.
ENVIRONMENTAL MICROBIOLOGY (2017)
An alternative polysaccharide uptake mechanism of marine bacteria
Greta Reintjes et al.
ISME JOURNAL (2017)
A simple and inexpensive technique for assessing contamination during drilling operations
Andre Friese et al.
LIMNOLOGY AND OCEANOGRAPHY-METHODS (2017)
Microbial community assembly and evolution in subseafloor sediment
Piotr Starnawski et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Methyl-compound use and slow growth characterize microbial life in 2-km-deep subseafloor coal and shale beds
Elizabeth Trembath-Reichert et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Thriving or surviving? Evaluating active microbial guilds in Baltic Sea sediment
Laura A. Zinke et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2017)
The life sulfuric: microbial ecology of sulfur cycling in marine sediments
Kenneth Wasmund et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2017)
Homoacetogenesis in Deep-Sea Chloroflexi, as Inferred by Single-Cell Genomics, Provides a Link to Reductive Dehalogenation in Terrestrial Dehalococcoidetes
Holly L. Sewell et al.
MBIO (2017)
Reverse Methanogenesis and Respiration in Methanotrophic Archaea
Peer H. A. Timmers et al.
ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL (2017)
Atribacteria from the Subseafloor Sedimentary Biosphere Disperse to the Hydrosphere through Submarine Mud Volcanoes
Tatsuhiko Hoshino et al.
FRONTIERS IN MICROBIOLOGY (2017)
Microbial community assembly in marine sediments
Caitlin Petro et al.
AQUATIC MICROBIAL ECOLOGY (2017)
Colonial Tube-Dwelling Ciliates Influence Methane Cycling and Microbial Diversity within Methane Seep Ecosystems
Alexis L. Pasulka et al.
FRONTIERS IN MARINE SCIENCE (2017)
Activity and interactions of methane seep microorganisms assessed by parallel transcription and FISH-NanoSIMS analyses
Anne E. Dekas et al.
ISME JOURNAL (2016)
Phylogeny and physiology of candidate phylum 'Atribacteria' (OP9/JS1) inferred from cultivation-independent genomics
Masaru K. Nobu et al.
ISME JOURNAL (2016)
Bacterial diversity and community composition from seasurface to subseafloor
Emily A. Walsh et al.
ISME JOURNAL (2016)
Potential Mechanisms for Microbial Energy Acquisition in Oxic Deep-Sea Sediments
Benjamin J. Tully et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2016)
Genomic evidence for distinct carbon substrate preferences and ecological niches of Bathyarchaeota in estuarine sediments
Cassandre Sara Lazar et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Extracellular electron transfer systems fuel cellulose oxidative degradation
Daniel Kracher et al.
SCIENCE (2016)
Artificial electron acceptors decouple archaeal methane oxidation from sulfate reduction
Silvan Scheller et al.
SCIENCE (2016)
Lytic Polysaccharide Monooxygenases: The Microbial Power Tool for Lignocellulose Degradation
Katja Salomon Johansen
TRENDS IN PLANT SCIENCE (2016)
Transcriptional analysis of sulfate reducing and chemolithoautotrophic sulfur oxidizing bacteria in the deep subseafloor
William D. Orsi et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2016)
Soil Fungal:Bacterial Ratios Are Linked to Altered Carbon Cycling
Ashish A. Malik et al.
FRONTIERS IN MICROBIOLOGY (2016)
Deep Subsurface Life from North Pond: Enrichment, Isolation, Characterization and Genomes of Heterotrophic Bacteria
Joseph A. Russell et al.
FRONTIERS IN MICROBIOLOGY (2016)
Genomic inference of the metabolism of cosmopolitan subsurface Archaea, Hadesarchaea
Brett J. Baker et al.
NATURE MICROBIOLOGY (2016)
Diversity and Biogeography of Bathyal and Abyssal Seafloor Bacteria
Christina Bienhold et al.
PLOS ONE (2016)
Phylogenetic Characterization of Marine Benthic Archaea in Organic-Poor Sediments of the Eastern Equatorial Pacific Ocean (ODP Site 1225)
Antje Lauer et al.
MICROORGANISMS (2016)
Towards a better quantitative assessment of the relevance of deep-sea viruses, Bacteria and Archaea in the functioning of the ocean seafloor
R. Danovaro et al.
AQUATIC MICROBIAL ECOLOGY (2015)
Cellular maintenance processes that potentially underpin the survival of subseafloor fungi over geological timescales
William D. Orsi et al.
ESTUARINE COASTAL AND SHELF SCIENCE (2015)
Fungal Traits That Drive Ecosystem Dynamics on Land
Kathleen K. Treseder et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2015)
Intercellular wiring enables electron transfer between methanotrophic archaea and bacteria
Gunter Wegener et al.
NATURE (2015)
Single cell activity reveals direct electron transfer in methanotrophic consortia
Shawn E. McGlynn et al.
NATURE (2015)
Presence of oxygen and aerobic communities from sea floor to basement in deep-sea sediments
Steven D'Hondt et al.
NATURE GEOSCIENCE (2015)
Virus decomposition provides an important contribution to benthic deep-sea ecosystem functioning
Antonio Dell'Anno et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Global dispersion and local diversification of the methane seep microbiome
S. Emil Ruff et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Exploring deep microbial life in coal-bearing sediment down to ∼2.5 km below the ocean floor
F. Inagaki et al.
SCIENCE (2015)
Methane metabolism in the archaeal phylum Bathyarchaeota revealed by genome-centric metagenomics
Paul N. Evans et al.
SCIENCE (2015)
Viral activities and life cycles in deep subseafloor sediments
Tim Engelhardt et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2015)
Physiological and cell morphology adaptation of Bacillus subtilis at near-zero specific growth rates: a transcriptome analysis
Wout Overkamp et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Nitrogen cycling in the deep sedimentary biosphere: nitrate isotopes in porewaters underlying the oligotrophic North Atlantic
S. D. Wankel et al.
BIOGEOSCIENCES (2015)
Life under extreme energy limitation: a synthesis of laboratory- and field-based investigations
Mark A. Lever et al.
FEMS MICROBIOLOGY REVIEWS (2015)
Dark fermentative hydrogen production from lignocellulosic hydrolyzates - A review
Marika E. Nissila et al.
BIOMASS & BIOENERGY (2014)
Spatial distribution of nitrogen fixation in methane seep sediment and the role of the ANME archaea
Anne E. Dekas et al.
ENVIRONMENTAL MICROBIOLOGY (2014)
High virus-to-cell ratios indicate ongoing production of viruses in deep subsurface sediments
Tim Engelhardt et al.
ISME JOURNAL (2014)
Single cell genomic study of Dehalococcoidetes species from deep-sea sediments of the Peruvian Margin
Anne-Kristin Kaster et al.
ISME JOURNAL (2014)
Explaining microbial genomic diversity in light of evolutionary ecology
Otto X. Cordero et al.
NATURE REVIEWS MICROBIOLOGY (2014)
High Fungal Diversity and Abundance Recovered in the Deep-Sea Sediments of the Pacific Ocean
Wei Xu et al.
MICROBIAL ECOLOGY (2014)
Marine ammonia-oxidizing archaeal isolates display obligate mixotrophy and wide ecotypic variation
Wei Qin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Global rates of marine sulfate reduction and implications for sub-sea-floor metabolic activities
Marshall W. Bowles et al.
SCIENCE (2014)
High frequency of phylogenetically diverse reductive dehalogenase-homologous genes in deep subseafloor sedimentary metagenomes
Mikihiko Kawai et al.
FRONTIERS IN MICROBIOLOGY (2014)
Meta-Analysis of Quantification Methods Shows that Archaea and Bacteria Have Similar Abundances in the Subseafloor
Karen G. Lloyd et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Deciphering the presence and activity of fungal communities in marine sediments using a model estuarine system
Gaetan Burgaud et al.
AQUATIC MICROBIAL ECOLOGY (2013)
Microbial community analysis of deeply buried marine sediments of the New Jersey shallow shelf (IODP Expedition 313)
Anja Breuker et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
Dark inorganic carbon fixation sustains the functioning of benthic deep-sea ecosystems
Massimiliano Molari et al.
GLOBAL BIOGEOCHEMICAL CYCLES (2013)
Biogeography of Rhizobium radiobacter and distribution of associated temperate phages in deep subseafloor sediments
Tim Engelhardt et al.
ISME JOURNAL (2013)
Insights into the phylogeny and coding potential of microbial dark matter
Christian Rinke et al.
NATURE (2013)
MICROBIOLOGY Intraterrestrial lifestyles
David L. Valentine
NATURE (2013)
Gene expression in the deep biosphere
William D. Orsi et al.
NATURE (2013)
Predominant archaea in marine sediments degrade detrital proteins
Karen G. Lloyd et al.
NATURE (2013)
Microbial life under extreme energy limitation
Tori M. Hoehler et al.
NATURE REVIEWS MICROBIOLOGY (2013)
Deep Sequencing of Subseafloor Eukaryotic rRNA Reveals Active Fungi across Marine Subsurface Provinces
William Orsi et al.
PLOS ONE (2013)
Cyclic 100-ka (glacial-interglacial) migration of subseafloor redox zonation on the Peruvian shelf
Sergio Contreras et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Prevalent genome streamlining and latitudinal divergence of planktonic bacteria in the surface ocean
Brandon K. Swan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Turnover of microbial lipids in the deep biosphere and growth of benthic archaeal populations
Sitan Xie et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Marine Fungi: Their Ecology and Molecular Diversity
Thomas A. Richards et al.
ANNUAL REVIEW OF MARINE SCIENCE, VOL 4 (2012)
Dissimilatory Reduction of Extracellular Electron Acceptors in Anaerobic Respiration
Katrin Richter et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Interstitial fluid chemistry of sediments underlying the North Atlantic gyre and the influence of subsurface fluid flow
Wiebke Ziebis et al.
EARTH AND PLANETARY SCIENCE LETTERS (2012)
Endospore abundance, microbial growth and necromass turnover in deep sub-seafloor sediment
Bente Aa Lomstein et al.
NATURE (2012)
Nitrogen loss from soil through anaerobic ammonium oxidation coupled to iron reduction
Wendy H. Yang et al.
NATURE GEOSCIENCE (2012)
Global distribution of microbial abundance and biomass in subseafloor sediment
Jens Kallmeyer et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Correlating microbial community profiles with geochemical data in highly stratified sediments from the Arctic Mid-Ocean Ridge
Steffen Leth Jorgensen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Aerobic Microbial Respiration in 86-Million-Year-Old Deep-Sea Red Clay
Hans Roy et al.
SCIENCE (2012)
Population Genomics of Early Events in the Ecological Differentiation of Bacteria
B. Jesse Shapiro et al.
SCIENCE (2012)
The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss
J. Jeffrey Morris et al.
MBIO (2012)
Prospects for the study of evolution in the deep biosphere
Jennifer F. Biddle et al.
FRONTIERS IN MICROBIOLOGY (2012)
Archaea in organic-lean and organic-rich marine subsurface sediments: an environmental gradient reflected in distinct phylogenetic lineages
Alan M. Durbin et al.
FRONTIERS IN MICROBIOLOGY (2012)
Microbial Extracellular Enzymes and the Marine Carbon Cycle
Carol Arnosti
ANNUAL REVIEW OF MARINE SCIENCE, VOL 3 (2011)
Environmental evidence for net methane production and oxidation in putative ANaerobic MEthanotrophic (ANME) archaea
Karen G. Lloyd et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Microbial diversity and stratification of South Pacific abyssal marine sediments
Alan M. Durbin et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Untapped potential: exploiting fungi in bioremediation of hazardous chemicals
Hauke Harms et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Microbial Ecology of the Dark Ocean above, at, and below the Seafloor
Beth N. Orcutt et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2011)
Carbon and nitrogen assimilation in deep subseafloor microbial cells
Yuki Morono et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Thaumarchaeotes abundant in refinery nitrifying sludges express amoA but are not obligate autotrophic ammonia oxidizers
Marc Mussmann et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Induction of prophages from deep-subseafloor bacteria
Tim Engelhardt et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2011)
Sediment-associated microdiversity within the Marine Group I Crenarchaeota
Alan M. Durbin et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2010)
Subseafloor sedimentary life in the South Pacific Gyre
Steven D'Hondt et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
A Constant Flux of Diverse Thermophilic Bacteria into the Cold Arctic Seabed
Casey Hubert et al.
SCIENCE (2009)
Deep-Sea Archaea Fix and Share Nitrogen in Methane-Consuming Microbial Consortia
Anne E. Dekas et al.
SCIENCE (2009)
Radiolytic hydrogen and microbial respiration in subsurface sediments
Carly C. Blair et al.
ASTROBIOLOGY (2007)
A conceptual model of organo-mineral interactions in soils: self-assembly of organic molecular fragments into zonal structures on mineral surfaces
M. Kleber et al.
BIOGEOCHEMISTRY (2007)
Adaptations to energy stress dictate the ecology and evolution of the Archaea
David L. Valentine
NATURE REVIEWS MICROBIOLOGY (2007)
Heterotrophic Archaea dominate sedimentary subsurface ecosystems off Peru
JF Biddle et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Anaerobic oxidation of methane and sulfate reduction along the Chilean continental margin
T Treude et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2005)
Research paper: Microbial survival - The paleome: A sedimentary genetic record of past microbial communities
F Inagaki et al.
ASTROBIOLOGY (2005)
Aging and death in an organism that reproduces by morphologically symmetric division
EJ Stewart et al.
PLOS BIOLOGY (2005)
Distributions of microbial activities in deep subseafloor sediments
S D'Hondt et al.
SCIENCE (2004)
Ongoing modification of Mediterranean Pleistocene sapropels mediated by prokaryotes
MJL Coolen et al.
SCIENCE (2002)
DNA as a nutrient novel role for bacterial competence gene homologs
SE Finkel et al.
JOURNAL OF BACTERIOLOGY (2001)
分享论文
