4.8 Article

Digestion-ligation-only Hi-C is an efficient and cost-effective method for chromosome conformation capture

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

The 4D nucleome project

Job Dekker et al.

NATURE (2017)

Article Biotechnology & Applied Microbiology

A streamlined tethered chromosome conformation capture protocol

Idan Gabdank et al.

BMC GENOMICS (2016)

Review Cell Biology

The second decade of 3C technologies: detailed insights into nuclear organization

Annette Denker et al.

GENES & DEVELOPMENT (2016)

Article Biochemical Research Methods

Micro-C XL: assaying chromosome conformation from the nucleosome to the entire genome

Tsung-Han S. Hsieh et al.

NATURE METHODS (2016)

Review Cell Biology

Genome-wide mapping and analysis of chromosome architecture

Anthony D. Schmitt et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2016)

Article Biochemistry & Molecular Biology

Juicer Provides a One-Click System for Analyzing Loop-Resolution Hi-C Experiments

Neva C. Durand et al.

CELL SYSTEMS (2016)

Article Biochemistry & Molecular Biology

Mapping Nucleosome Resolution Chromosome Folding in Yeast by Micro-C

Tsung-Han S. Hsieh et al.

Article Genetics & Heredity

Mapping long-range promoter contacts in human cells with high-resolution capture Hi-C

Borbala Mifsud et al.

NATURE GENETICS (2015)

Article Multidisciplinary Sciences

Capture Hi-C identifies the chromatin interactome of colorectal cancer risk loci

Roland Jaeger et al.

NATURE COMMUNICATIONS (2015)

Article Chemistry, Multidisciplinary

Next-Generation in Situ Hybridization Chain Reaction: Higher Gain, Lower Cost, Greater Durability

Harry M. T. Choi et al.

ACS NANO (2014)

Article Biochemistry & Molecular Biology

A 3D Map of the Human Genome at Kilobase Resolution Reveals Principles of Chromatin Looping

Suhas S. P. Rao et al.

Article Biotechnology & Applied Microbiology

Chromosome-scale scaffolding of de novo genome assemblies based on chromatin interactions

Joshua N. Burton et al.

NATURE BIOTECHNOLOGY (2013)

Letter Biochemical Research Methods

Exploring long-range genome interactions using the WashU Epigenome Browser

Xin Zhou et al.

NATURE METHODS (2013)

Article Biochemical Research Methods

HiCNorm: removing biases in Hi-C data via Poisson regression

Ming Hu et al.

BIOINFORMATICS (2012)

News Item Multidisciplinary Sciences

THE HUMAN ENCYCLOPAEDIA

Brendan Maher

NATURE (2012)

Article Multidisciplinary Sciences

Spatial partitioning of the regulatory landscape of the X-inactivation centre

Elphege P. Nora et al.

NATURE (2012)

Article Biotechnology & Applied Microbiology

Genome architectures revealed by tethered chromosome conformation capture and population-based modeling

Reza Kalhor et al.

NATURE BIOTECHNOLOGY (2012)

Article Biochemical Research Methods

Iterative correction of Hi-C data reveals hallmarks of chromosome organization

Maxim Imakaev et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

ChIA-PET analysis of transcriptional chromatin interactions

Jingyao Zhang et al.

METHODS (2012)

Article Biochemical Research Methods

Hi-C: A comprehensive technique to capture the conformation of genomes

Jon-Matthew Belton et al.

METHODS (2012)

Article Biochemical Research Methods

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan et al.

BIOINFORMATICS (2010)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

An oestrogen-receptor-α-bound human chromatin interactome

Melissa J. Fullwood et al.

NATURE (2009)

Article Multidisciplinary Sciences

Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome

Erez Lieberman-Aiden et al.

SCIENCE (2009)

Article Multidisciplinary Sciences

Capturing chromosome conformation

J Dekker et al.

SCIENCE (2002)

Review Genetics & Heredity

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

T Cremer et al.

NATURE REVIEWS GENETICS (2001)