4.1 Article

Complete genome sequence of Nibribacter radioresistens DG15C, a radiation resistant bacterium

期刊

MOLECULAR & CELLULAR TOXICOLOGY
卷 14, 期 3, 页码 323-328

出版社

KOREAN SOCIETY TOXICOGENOMICS & TOXICOPROTEOMICS-KSTT
DOI: 10.1007/s13273-018-0035-z

关键词

Nibribacter; gamma-Radiation; Radiation resistance; Nucleotide excision repair; PacBio RS II; Complete genome

资金

  1. MIST (Ministry of Science and ICT), Korea, under the National Program for Excellence in SW [2016-0-00022]
  2. National Institute of Biological Resources (NIBR) - Ministry of Environment (MOE) of the Republic of Korea [NIBR201601113]
  3. Ministry of Environment (ME), Republic of Korea [NIBR201601113] Funding Source: Korea Institute of Science & Technology Information (KISTI), National Science & Technology Information Service (NTIS)

向作者/读者索取更多资源

Backgrounds: The ionizing radiation from the gamma rays is damaging the genetic materials of the cells, possibly leading to cell death and cause permanent changes within daughter cells. A red pigmented, Gramnegative, aerobic, short-rod shaped, non-motile, UV and gamma radiation tolerant bacterium Nibribacter radioresistens DG15C was isolated from a soil sample collected in a rice field in South Korea. Methods: The complete genome of DG15C was sequenced and assembled using Pacific Biosciences RS II system. The genome sequence was annotated using Genomes-Expert Review (IMG-ER) platform, Prodigal, and JGI GenePRIMP pipeline. The protein-coding genes were identified using Prodigal, Pfam and COG databases implemented in the IMG systems. Results: The complete genome sequence of strain DG15C consists of a circular chromosome (4,143,738 bp) encoding 3,969 coding sequences (CDs) and 3,582 genes. The bacterium showed resistance to gamma and UVC radiations. Conclusion: The genome annotation as confirmed the presence of gene clusters involved in the toxicity resistance of radiation.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.1
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

暂无数据
暂无数据