相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Histone variants on the move: substrates for chromatin dynamics
Paul B. Talbert et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)
Histone Variant H2AL2 Guides Transition Protein-Dependent Protamine Assembly in Male Germ Cells
Sophie Barral et al.
MOLECULAR CELL (2017)
Variants of core histones and their roles in cell fate decisions, development and cancer
Marcus Buschbeck et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2017)
MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones
Sara El Kennani et al.
EPIGENETICS & CHROMATIN (2017)
Phylogenetic analysis of the core histone doublet and DNA topo II genes of Marseilleviridae: evidence of proto-eukaryotic provenance
Albert J. Erives
EPIGENETICS & CHROMATIN (2017)
A new link between transcriptional initiation and pre-mRNA splicing: The RNA binding histone variant H2A.B
Tatiana A. Soboleva et al.
PLOS GENETICS (2017)
Comparative analysis of DNA methylome and transcriptome of skeletal muscle in lean-, obese-, and mini-type pigs
Yalan Yang et al.
SCIENTIFIC REPORTS (2017)
SLY regulates genes involved in chromatin remodeling and interacts with TBL1XR1 during sperm differentiation
Charlotte Moretti et al.
CELL DEATH AND DIFFERENTIATION (2017)
The characterization of macroH2A beyond vertebrates supports an ancestral origin and conserved role for histone variants in chromatin
Ciro Rivera-Casas et al.
EPIGENETICS (2016)
HistoneDB 2.0: a histone database with variants-an integrated resource to explore histones and their variants
Eli J. Draizen et al.
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION (2016)
Meiotic Silencing in Mammals
James M. A. Turner
ANNUAL REVIEW OF GENETICS, VOL 49 (2015)
Nucleosome adaptability conferred by sequence and structural variations in histone H2A-H2B dimers
Alexey K. Shaytan et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2015)
Site-Specific Amino Acid Preferences Are Mostly Conserved in Two Closely Related Protein Homologs
Michael B. Doud et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Tree of Life Reveals Clock-Like Speciation and Diversification
S. Blair Hedges et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Integrated transcriptome analysis of mouse spermatogenesis
Gennady Margolin et al.
BMC GENOMICS (2014)
Signs of Genomic Battles in Mouse Sex Chromosomes
Doris Bachtrog
CELL (2014)
Sequencing the Mouse Y Chromosome Reveals Convergent Gene Acquisition and Amplification on Both Sex Chromosomes
Y. Q. Shirleen Soh et al.
CELL (2014)
Histone variants: dynamic punctuation in transcription
Christopher M. Weber et al.
GENES & DEVELOPMENT (2014)
The histone variant H2A.Bbd is enriched at sites of DNA synthesis
Viola Sansoni et al.
NUCLEIC ACIDS RESEARCH (2014)
FUBAR: A Fast, Unconstrained Bayesian AppRoximation for Inferring Selection
Ben Murrell et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Human housekeeping genes, revisited
Eli Eisenberg et al.
TRENDS IN GENETICS (2013)
Structural basis of a nucleosome containing histone H2A.B/H2A.Bbd that transiently associates with reorganized chromatin
Yasuhiro Arimura et al.
SCIENTIFIC REPORTS (2013)
TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions
Daehwan Kim et al.
GENOME BIOLOGY (2013)
Histone Variant H2A.Bbd Is Associated with Active Transcription and mRNA Processing in Human Cells
Michael Y. Tolstorukov et al.
MOLECULAR CELL (2012)
A unique H2A histone variant occupies the transcriptional start site of active genes
Tatiana A. Soboleva et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)
Histone H2A variants in nucleosomes and chromatin: more or less stable?
Clemens Boenisch et al.
NUCLEIC ACIDS RESEARCH (2012)
ExPASy: SIB bioinformatics resource portal
Panu Artimo et al.
NUCLEIC ACIDS RESEARCH (2012)
A unified phylogeny-based nomenclature for histone variants
Paul B. Talbert et al.
EPIGENETICS & CHROMATIN (2012)
H3.5 is a novel hominid-specific histone H3 variant that is specifically expressed in the seminiferous tubules of human testes
Raphael Schenk et al.
CHROMOSOMA (2011)
The evolution of gene expression levels in mammalian organs
David Brawand et al.
NATURE (2011)
Sex-chromosome evolution: recent progress and the influence of male and female heterogamety
Hans Ellegren
NATURE REVIEWS GENETICS (2011)
A Molecular Phylogeny of Living Primates
Polina Perelman et al.
PLOS GENETICS (2011)
Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology
Wayne Delport et al.
BIOINFORMATICS (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Birth-and-Death Long-Term Evolution Promotes Histone H2B Variant Diversification in the Male Germinal Cell Line
Rodrigo Gonzalez-Romero et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
Adaptive Evolution of Foundation Kinetochore Proteins in Primates
Mary G. Schueler et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
MicroRNA control of signal transduction
Masafumi Inui et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)
H2A.Bbd: an X-chromosome-encoded histone involved in mammalian spermiogenesis
Toyotaka Ishibashi et al.
NUCLEIC ACIDS RESEARCH (2010)
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
Stephane Guindon et al.
SYSTEMATIC BIOLOGY (2010)
Major Evolutionary Transitions in Centromere Complexity
Harmit S. Malik et al.
CELL (2009)
Two novel mouse genes mapped to chromosome Yp are expressed specifically in spermatids
Lydia Ferguson et al.
MAMMALIAN GENOME (2009)
Distinctive chromatin in human sperm packages genes for embryo development
Saher Sue Hammoud et al.
NATURE (2009)
The incorporation of the novel histone variant H2AL2 confers unusual structural and functional properties of the nucleosome
Sajad Hussain Syed et al.
NUCLEIC ACIDS RESEARCH (2009)
Sexual selection drives weak positive selection in protamine genes and high promoter divergence, enhancing sperm competitiveness
Juan Martin-Coello et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)
A new insight into male genome reprogramming by histone variants and histone code
Faycal Boussouar et al.
CELL CYCLE (2008)
H2A.Bbd: a quickly evolving hypervariable mammalian histone that destabilizes nucleosomes in an acetylation-independent way
Jose Maria Eirin-Lopez et al.
FASEB JOURNAL (2008)
Quickly evolving histones, nucleosome stability and chromatin folding:: All about histone H2A.Bbd
Rodrigo Gonzalez-Romero et al.
GENE (2008)
Testis-Specific Histone Variants H2AL1/2 Rapidly Disappear from Paternal Heterochromatin after Fertilization
Fang Wu et al.
JOURNAL OF REPRODUCTION AND DEVELOPMENT (2008)
Metabolism and regulation of canonical histone mRNAs: life without a poly(A) tail
William F. Marzluff et al.
NATURE REVIEWS GENETICS (2008)
The mouse sperm proteome characterized via IPG strip prefractionation and LC-MS/MS identification
Mark A. Baker et al.
PROTEOMICS (2008)
Clustal W and clustal X version 2.0
M. A. Larkin et al.
BIOINFORMATICS (2007)
Identification of gene products present in Triton X-100 soluble and insoluble fractions of human spermatozoa lysates using LC-MS/MS analysis
Mark A. Baker et al.
PROTEOMICS CLINICAL APPLICATIONS (2007)
The delayed rise of present-day mammals
Olaf R. P. Bininda-Emonds et al.
NATURE (2007)
Pericentric heterochromatin reprogramming by new histone variants during mouse spermiogenesis
Jerome Govin et al.
JOURNAL OF CELL BIOLOGY (2007)
The evolution of sex-biased genes and sex-biased gene expression
Hans Ellegren et al.
NATURE REVIEWS GENETICS (2007)
GARD: a genetic algorithm for recombination detection
Sergei L. Kosakovsky Pond et al.
BIOINFORMATICS (2006)
Archaeal histones and the origin of the histone fold
Kathleen Sandman et al.
CURRENT OPINION IN MICROBIOLOGY (2006)
Dissection of the unusual structural and functional properties of the variant H2A.Bbd nucleosome
Cecile-Marie Doyen et al.
EMBO JOURNAL (2006)
PAL2NAL: robust conversion of protein sequence alignments into the corresponding codon alignments
Mikita Suyama et al.
NUCLEIC ACIDS RESEARCH (2006)
The histone database:: A comprehensive resource for histones and histone fold-containing proteins
L Mariño-Ramirez et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2006)
The DNA sequence of the human X chromosome
MT Ross et al.
NATURE (2005)
HyPhy: hypothesis testing using phylogenies
SLK Pond et al.
BIOINFORMATICS (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Evolutionary strata on the mouse X chromosome correspond to strata on the human X chromosome
SA Sandstedt et al.
GENOME RESEARCH (2004)
Novel human testis-specific histone H2B encoded by the interrupted gene on the X chromosome
D Churikov et al.
GENOMICS (2004)
SWI/SNF remodeling and p300-dependent transcription of histone variant H2ABbd nucleosomal arrays
D Angelov et al.
EMBO JOURNAL (2004)
Nucleosomes containing the histone variant H2A.Bbd organize only 118 base pairs of DNA
YH Bao et al.
EMBO JOURNAL (2004)
Histone variant H2ABbd confers lower stability to the nucleosome
T Gautier et al.
EMBO REPORTS (2004)
FusionDB: a database for in-depth analysis of prokaryotic gene fusion events
K Suhre et al.
NUCLEIC ACIDS RESEARCH (2004)
WebLogo: A sequence logo generator
GE Crooks et al.
GENOME RESEARCH (2004)
Structural characterization of histone H2A variants
S Chakravarthy et al.
COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY (2004)
UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
S Guindon et al.
SYSTEMATIC BIOLOGY (2003)
Phylogenomics of the nucleosome
HS Malik et al.
NATURE STRUCTURAL BIOLOGY (2003)
Mammalian sperm proteins are rapidly evolving: Evidence of positive selection in functionally diverse genes
DG Torgerson et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
Centromeric localization and adaptive evolution of an Arabidopsis histone H3 variant
PB Talbert et al.
PLANT CELL (2002)
Purifying selection and birth-and-death evolution in the histone H4 gene family
H Piontkivska et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
Molecular evolution of the nontandemly repeated genes of the histone 3 Multigene family
AP Rooney et al.
MOLECULAR BIOLOGY AND EVOLUTION (2002)
The major subacrosomal occupant of bull spermatozoa is a novel histone H2B variant associated with the forming acrosome during spermiogenesis
RB Aul et al.
DEVELOPMENTAL BIOLOGY (2001)
The centromere paradox: Stable inheritance with rapidly evolving DNA
S Henikoff et al.
SCIENCE (2001)
A novel chromatin protein, distantly related to histone H2A, is largely excluded from the inactive X chromosome
BP Chadwick et al.
JOURNAL OF CELL BIOLOGY (2001)
An unusual form of purifying selection in a sperm protein
AP Rooney et al.
MOLECULAR BIOLOGY AND EVOLUTION (2000)
Rapid evolution of male reproductive genes in the descent of man
GJ Wyckoff et al.
NATURE (2000)