相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Dosage compensation and sex-specific epigenetic landscape of the X chromosome in the pea aphid
Gautier Richard et al.
EPIGENETICS & CHROMATIN (2017)
Rapid transcriptional plasticity of duplicated gene clusters enables a clonally reproducing aphid to colonise diverse plant species
Thomas C. Mathers et al.
GENOME BIOLOGY (2017)
Drosophila X-Linked Genes Have Lower Translation Rates than Autosomal Genes
Zhenguo Zhang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
De novo transcriptome assembly of the grapevine phylloxera allows identification of genes differentially expressed between leaf- and root-feeding forms
Claude Rispe et al.
BMC GENOMICS (2016)
Misassembly detection using paired-end sequence reads and optical mapping data
Martin D. Muggli et al.
BIOINFORMATICS (2015)
The effects of sex-biased gene expression and X-linkage on rates of adaptive protein sequence evolution in Drosophila
V. Avila et al.
Biology Letters (2015)
Gene expression, chromosome heterogeneity and the fast-X effect in mammals
Linh-Phuong Nguyen et al.
BIOLOGY LETTERS (2015)
Evaluation of variant detection software for pooled next-generation sequence data
Howard W. Huang et al.
BMC BIOINFORMATICS (2015)
Variation in the X:Autosome Distribution of Male-Biased Genes among Drosophila melanogaster Tissues and Its Relationship with Dosage Compensation
Ann Kathrin Huylmans et al.
GENOME BIOLOGY AND EVOLUTION (2015)
The X Chromosome of Hemipteran Insects: Conservation, Dosage Compensation and Sex-Biased Expression
Arka Pal et al.
GENOME BIOLOGY AND EVOLUTION (2015)
Genetic characterisation of new host-specialised biotypes and novel associations with bacterial symbionts in the pea aphid complex
Jean Peccoud et al.
INSECT CONSERVATION AND DIVERSITY (2015)
Determinants of the rate of protein sequence evolution
Jianzhi Zhang et al.
NATURE REVIEWS GENETICS (2015)
Whole-genome re-sequencing of non-model organisms: lessons from unmapped reads
A. Gouin et al.
HEREDITY (2015)
Sequencing the Mouse Y Chromosome Reveals Convergent Gene Acquisition and Amplification on Both Sex Chromosomes
Y. Q. Shirleen Soh et al.
CELL (2014)
Faster-X Adaptive Protein Evolution in House Mice
Athanasios Kousathanas et al.
GENETICS (2014)
Faster-X Effects in Two Drosophila Lineages
Victoria Avila et al.
GENOME BIOLOGY AND EVOLUTION (2014)
Accelerated Evolution of Morph-Biased Genes in Pea Aphids
Swapna R. Purandare et al.
MOLECULAR BIOLOGY AND EVOLUTION (2014)
Measuring error rates in genomic perturbation screens: gold standards for human functional genomics
Traver Hart et al.
MOLECULAR SYSTEMS BIOLOGY (2014)
Genetic Control of Contagious Asexuality in the Pea Aphid
Julie Jaquiery et al.
PLOS GENETICS (2014)
Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping
Mathieu Gautier et al.
MOLECULAR ECOLOGY (2013)
The evolutionary causes and consequences of sex-biased gene expression
John Parsch et al.
NATURE REVIEWS GENETICS (2013)
The faster-X effect: integrating theory and data
Richard P. Meisel et al.
TRENDS IN GENETICS (2013)
Widespread Selection Across Coding and Noncoding DNA in the Pea Aphid Genome
Ryan D. Bickel et al.
G3-GENES GENOMES GENETICS (2013)
Masculinization of the X Chromosome in the Pea Aphid
Julie Jaquiery et al.
PLOS GENETICS (2013)
The genetics of sex chromosomes: evolution and implications for hybrid incompatibility
Norman A. Johnson et al.
YEAR IN EVOLUTIONARY BIOLOGY (2012)
Genomic Variation in Natural Populations of Drosophila melanogaster
Charles H. Langley et al.
GENETICS (2012)
Accelerated Evolution of Sex Chromosomes in Aphids, an X0 System
Julie Jaquiery et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
Genome scans reveal candidate regions involved in the adaptation to host plant in the pea aphid complex
J. Jaquiery et al.
MOLECULAR ECOLOGY (2012)
The Drosophila melanogaster Genetic Reference Panel
Trudy F. C. Mackay et al.
NATURE (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
LoFreq: a sequence-quality aware, ultra-sensitive variant caller for uncovering cell-population heterogeneity from high-throughput sequencing datasets
Andreas Wilm et al.
NUCLEIC ACIDS RESEARCH (2012)
Extensive X-linked adaptive evolution in central chimpanzees
Christina Hvilsom et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Estimation of the Neutrality Index
Nina Stoletzki et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
A framework for variation discovery and genotyping using next-generation DNA sequencing data
Mark A. DePristo et al.
NATURE GENETICS (2011)
PoPoolation: A Toolbox for Population Genetic Analysis of Next Generation Sequencing Data from Pooled Individuals
Robert Kofler et al.
PLOS ONE (2011)
Facultative Symbiont Infections Affect Aphid Reproduction
Jean-Christophe Simon et al.
PLOS ONE (2011)
The Ecoresponsive Genome of Daphnia pulex
John K. Colbourne et al.
SCIENCE (2011)
Are all sex chromosomes created equal?
Doris Bachtrog et al.
TRENDS IN GENETICS (2011)
Host races of the pea aphid Acyrthosiphon pisum differ in male wing phenotypes
A. Frantz et al.
BULLETIN OF ENTOMOLOGICAL RESEARCH (2010)
EFFECTIVE POPULATION SIZE AND THE FASTER-X EFFECT: EMPIRICAL RESULTS AND THEIR INTERPRETATION
Judith E. Mank et al.
EVOLUTION (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
Faster-Z Evolution Is Predominantly Due to Genetic Drift
Judith E. Mank et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
Genetic conflict and sex chromosome evolution
Colin D. Meiklejohn et al.
TRENDS IN ECOLOGY & EVOLUTION (2010)
Genome Sequence of the Pea Aphid Acyrthosiphon pisum
Stephen Richards et al.
PLOS BIOLOGY (2010)
Differential expression analysis for sequence count data
Simon Anders et al.
GENOME BIOLOGY (2010)
FrameDP: sensitive peptide detection on noisy matured sequences
Jerome Gouzy et al.
BIOINFORMATICS (2009)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
EFFECTIVE POPULATION SIZE AND THE FASTER-X EFFECT: AN EXTENDED MODEL
Beatriz Vicoso et al.
EVOLUTION (2009)
A role for a neo-sex chromosome in stickleback speciation
Jun Kitano et al.
NATURE (2009)
A continuum of genetic divergence from sympatric host races to species in the pea aphid complex
Jean Peccoud et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Post-Pleistocene radiation of the pea aphid complex revealed by rapidly evolving endosymbionts
Jean Peccoud et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
CAIcal:: A combined set of tools to assess codon usage adaptation
Pere Puigbo et al.
BIOLOGY DIRECT (2008)
Testing for neutrality in samples with sequencing errors
Guillaume Achat
GENETICS (2008)
Effects of X-linkage and sex-biased gene expression on the rate of adaptive protein evolution in Drosophila
John F. Baines et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Host range expansion of an introduced insect pest through multiple colonizations of specialized clones
J. Peccoud et al.
MOLECULAR ECOLOGY (2008)
Rarity of males in pea aphids results in mutational decay
Jennifer A. Brisson et al.
SCIENCE (2008)
Analysis of heterochromatic epigenetic markers in the holocentric chromosomes of the aphid Acyrthosiphon pisum
Mauro Mandrioli et al.
CHROMOSOME RESEARCH (2007)
Sex chromosome-linked species recognition and evolution of reproductive isolation in flycatchers
Stein A. Saether et al.
SCIENCE (2007)
Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
Gerard Talavera et al.
SYSTEMATIC BIOLOGY (2007)
The evolution of sex-biased genes and sex-biased gene expression
Hans Ellegren et al.
NATURE REVIEWS GENETICS (2007)
Tissue-specific expression and regulation of sexually dimorphic genes in mice
Xia Yang et al.
GENOME RESEARCH (2006)
Why highly expressed proteins evolve slowly
DA Drummond et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Steps in the evolution of heteromorphic sex chromosomes
D Charlesworth et al.
HEREDITY (2005)
Functional genomic analysis of the rates of protein evolution
DP Wall et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Significant impact of protein dispensability on the instantaneous rate of protein evolution
JZ Zhang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
Genome-wide midrange transcription profiles reveal expression level relationships in human tissue specification
I Yanai et al.
BIOINFORMATICS (2005)
The mouse X chromosome is enriched for sex-biased genes not subject to selection by meiotic sex chromosome inactivation
PP Khil et al.
NATURE GENETICS (2004)
Sex-linked mammalian sperm proteins evolve faster than autosomal ones
DG Torgerson et al.
MOLECULAR BIOLOGY AND EVOLUTION (2003)
Paucity of genes on the Drosophila X chromosome showing male-biased expression
M Parisi et al.
SCIENCE (2003)
A sex-linked locus controls wing polymorphism in males of the pea aphid, Acyrthosiphon pisum (Harris)
MC Caillaud et al.
HEREDITY (2002)
The genome sequence of Drosophila melanogaster
MD Adams et al.
SCIENCE (2000)
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
J Castresana
MOLECULAR BIOLOGY AND EVOLUTION (2000)
分享论文
