4.7 Article

Genome-wide strategies identify downstream target genes of chick connective tissue-associated transcription factors

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Floor-plate-derived netrin-1 is dispensable for commissural axon guidance

Chloe Dominici et al.

NATURE (2017)

Review Cell Biology

Non-myogenic Contribution to Muscle Development and Homeostasis: The Role of Connective Tissues

Sonya Nassari et al.

FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2017)

Article Developmental Biology

Tendon development and diseases

Ludovic Gaut et al.

WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2016)

Review Cell Biology

TGF-/SMAD Pathway and Its Regulation in Hepatic Fibrosis

Fengyun Xu et al.

JOURNAL OF HISTOCHEMISTRY & CYTOCHEMISTRY (2016)

Review Pharmacology & Pharmacy

Notch in fibrosis and as a target of anti-fibrotic therapy

Biao Hu et al.

PHARMACOLOGICAL RESEARCH (2016)

Review Oncology

The biology and function of fibroblasts in cancer

Raghu Kalluri

NATURE REVIEWS CANCER (2016)

Review Biochemistry & Molecular Biology

Architectural and Functional Commonalities between Enhancers and Promoters

Tae-Kyung Kim et al.

Article Orthopedics

Molecular Regulation of Tendon Cell Fate During Development

Alice H. Huang et al.

JOURNAL OF ORTHOPAEDIC RESEARCH (2015)

Review Cell Biology

The selection and function of cell type-specific enhancers

Sven Heinz et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2015)

Article Multidisciplinary Sciences

Efficient Test and Visualization of Multi-Set Intersections

Minghui Wang et al.

SCIENTIFIC REPORTS (2015)

Review Developmental Biology

Distinct contextual roles for Notch signalling in skeletal muscle stem cells

Philippos Mourikis et al.

BMC DEVELOPMENTAL BIOLOGY (2014)

Article Developmental Biology

Transcriptomic analysis of mouse limb tendon cells during development

Emmanuelle Havis et al.

DEVELOPMENT (2014)

Article Biochemistry & Molecular Biology

ADAMTS-18: A metalloproteinase with multiple functions

Jianlu Wei et al.

FRONTIERS IN BIOSCIENCE-LANDMARK (2014)

Review Cell Biology

Physical influences of the extracellular environment on cell migration

Guillaume Charras et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2014)

Review Cell Biology

Extracellular matrix assembly: a multiscale deconstruction

Janna K. Mouw et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2014)

Article Multidisciplinary Sciences

Defining functional DNA elements in the human genome

Manolis Kellis et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Cell & Tissue Engineering

Tendon proper- and peritenon-derived progenitor cells have unique tenogenic properties

Michael J. Mienaltowski et al.

STEM CELL RESEARCH & THERAPY (2014)

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

Review Cell Biology

Mechanobiology and Developmental Control

Tadanori Mammoto et al.

ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 29 (2013)

Review Medicine, Research & Experimental

Molecular basis of organ fibrosis: Potential therapeutic approaches

Asish K. Ghosh et al.

EXPERIMENTAL BIOLOGY AND MEDICINE (2013)

Article Biochemistry & Molecular Biology

Distinct global shifts in genomic binding profiles of limb malformation-associated HOXD13 mutations

Daniel M. Ibrahim et al.

GENOME RESEARCH (2013)

Article Medicine, Research & Experimental

Transcription factor EGR1 directs tendon differentiation and promotes tendon repair

Marie-Justine Guerquin et al.

JOURNAL OF CLINICAL INVESTIGATION (2013)

Article Urology & Nephrology

Wnt4/β-Catenin Signaling in Medullary Kidney Myofibroblasts

Derek P. DiRocco et al.

JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY (2013)

Review Multidisciplinary Sciences

Topology of mammalian developmental enhancers and their regulatory landscapes

Wouter de Laat et al.

NATURE (2013)

Article Biotechnology & Applied Microbiology

TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions

Daehwan Kim et al.

GENOME BIOLOGY (2013)

Article Biochemistry & Molecular Biology

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Stephen G. Landt et al.

GENOME RESEARCH (2012)

Article Biochemical Research Methods

NIH Image to ImageJ: 25 years of image analysis

Caroline A. Schneider et al.

NATURE METHODS (2012)

Review Genetics & Heredity

Transcription factors: from enhancer binding to developmental control

Francois Spitz et al.

NATURE REVIEWS GENETICS (2012)

Article Biochemical Research Methods

DREME: motif discovery in transcription factor ChIP-seq data

Timothy L. Bailey

BIOINFORMATICS (2011)

Article Biochemical Research Methods

FIMO: scanning for occurrences of a given motif

Charles E. Grant et al.

BIOINFORMATICS (2011)

Article Cell & Tissue Engineering

Cell Fate Potential of Human Pluripotent Stem Cells Is Encoded by Histone Modifications

Seok-Ho Hong et al.

CELL STEM CELL (2011)

Article Developmental Biology

Connective tissue fibroblasts and Tcf4 regulate myogenesis

Sam J. Mathew et al.

DEVELOPMENT (2011)

Review Developmental Biology

The extracellular matrix dimension of skeletal muscle development

Solveig Thorsteinsdottir et al.

DEVELOPMENTAL BIOLOGY (2011)

Article Developmental Biology

The zinc finger transcription factors Osr1 and Osr2 control synovial joint formation

Yang Gao et al.

DEVELOPMENTAL BIOLOGY (2011)

Article Cell Biology

ERK5 Regulates Muscle Cell Fusion through Klf Transcription Factors

Kazunori Sunadome et al.

DEVELOPMENTAL CELL (2011)

Review Anatomy & Morphology

Soft Tissue Patterning: Muscles and Tendons of the Limb Take Their Form

Peleg Hasson

DEVELOPMENTAL DYNAMICS (2011)

Article Biochemistry & Molecular Biology

EGR1 and EGR2 Involvement in Vertebrate Tendon Differentiation

Veronique Lejard et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2011)

Review Cell Biology

Transcriptional mechanisms regulating skeletal muscle differentiation, growth and homeostasis

Thomas Braun et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2011)

Article Biochemical Research Methods

BEDTools: a flexible suite of utilities for comparing genomic features

Aaron R. Quinlan et al.

BIOINFORMATICS (2010)

Article Cardiac & Cardiovascular Systems

Wnt/frizzled signalling modulates the migration and differentiation of immortalized cardiac fibroblasts

Hilde Laeremans et al.

CARDIOVASCULAR RESEARCH (2010)

Review Developmental Biology

The extracellular matrix in development and morphogenesis: A dynamic view

Tania Rozario et al.

DEVELOPMENTAL BIOLOGY (2010)

Article Anatomy & Morphology

Embryonic Expression of the Chicken Kruppel-Like (KLF) Transcription Factor Gene Family

Parker B. Antin et al.

DEVELOPMENTAL DYNAMICS (2010)

Article Neurosciences

Netrin 1 Provides a Chemoattractive Cue for the Ventral Migration of GnRH Neurons in the Chick Forebrain

Shizuko Murakami et al.

JOURNAL OF COMPARATIVE NEUROLOGY (2010)

Article Biochemistry & Molecular Biology

PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium

Huaiyu Mi et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Genetics & Heredity

Mutations of the FHL1 Gene Cause Emery-Dreifuss Muscular Dystrophy

Lucie Gueneau et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2009)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

WNT11 acts as a directional cue to organize the elongation of early muscle fibres

Jerome Gros et al.

NATURE (2009)

Article Multidisciplinary Sciences

Diversity and Complexity in DNA Recognition by Transcription Factors

Gwenael Badis et al.

SCIENCE (2009)

Article Cell Biology

A core Klf circuitry regulates self-renewal of embryonic stem cells

Jianming Jiang et al.

NATURE CELL BIOLOGY (2008)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Multidisciplinary Sciences

Genome-wide maps of chromatin state in pluripotent and lineage-committed cells

Tarjei S. Mikkelsen et al.

NATURE (2007)

Article Biotechnology & Applied Microbiology

Quantifying similarity between motifs

Shobhit Gupta et al.

GENOME BIOLOGY (2007)

Review Cell Biology

Netrins: beyond the brain

Vincenzo Cirulli et al.

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2007)

Article Developmental Biology

Comparative expression pattern of Odd-skipped related genes Osr1 and Osr2 in chick embryonic development

Sigmar Stricker et al.

GENE EXPRESSION PATTERNS (2006)

Article Biotechnology & Applied Microbiology

A bacterial one-hybrid system for determining the DNA-binding specificity of transcription factors

XD Meng et al.

NATURE BIOTECHNOLOGY (2005)

Review Neurosciences

Guidance of vascular and neural network formation

A Eichmann et al.

CURRENT OPINION IN NEUROBIOLOGY (2005)

Article Developmental Biology

Wnt signalling regulates myogenic differentiation in the developing avian wing

K Anakwe et al.

DEVELOPMENT (2003)

Article Biochemistry & Molecular Biology

Assembly of collagen types II, IX and XI into nascent hetero-fibrils by a rat chondrocyte cell line

RJ Fernandes et al.

EUROPEAN JOURNAL OF BIOCHEMISTRY (2003)

Review Multidisciplinary Sciences

Developmental regulation of the growth plate

HM Kronenberg

NATURE (2003)

Article Biochemistry & Molecular Biology

Cytoscape: A software environment for integrated models of biomolecular interaction networks

P Shannon et al.

GENOME RESEARCH (2003)