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Non-Uniform and Absolute Minimal Sampling for High-Throughput Multidimensional NMR Applications

期刊

CHEMISTRY-A EUROPEAN JOURNAL
卷 24, 期 45, 页码 11535-11544

出版社

WILEY-V C H VERLAG GMBH
DOI: 10.1002/chem.201800954

关键词

automated spectral analysis; biomolecular; metabolomics; nuclear magnetic resonance; NMR experiments

资金

  1. National Institutes of Health [R01 GM 066041]

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Many biomolecular NMR applications can benefit from the faster acquisition of multidimensional NMR data with high resolution and their automated analysis and interpretation. In recent years, a number of non-uniform sampling (NUS) approaches have been introduced for the reconstruction of multidimensional NMR spectra, such as compressed sensing, thereby bypassing traditional Fourier-transform processing. Such approaches are applicable to both biomacromolecules and small molecules and their complex mixtures and can be combined with homonuclear decoupling (pure shift) and covariance processing. For homonu-clear 2D TOCSY experiments, absolute minimal sampling (AMS) permits the drastic shortening of measurement times necessary for high-throughput applications for identification and quantification of components in complex biological mixtures in the field of metabolomics. Such TOCSY spectra can be comprehensively represented by graphic theoretical maximal cliques for the identification of entire spin systems and their subsequent query against NMR databases. Integration of these methods in webservers permits the rapid and reliable identification of mixture components. Recent progress is reviewed in this Minireview.

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