4.7 Article Proceedings Paper

Towards pan-genome read alignment to improve variation calling

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Analysis of protein-coding genetic variation in 60,706 humans

Monkol Lek et al.

NATURE (2016)

Article Biochemical Research Methods

Repeat- and error-aware comparison of deletions

Roland Wittler et al.

BIOINFORMATICS (2015)

Article Multidisciplinary Sciences

A global reference for human genetic variation

David M. Altshuler et al.

NATURE (2015)

Article Multidisciplinary Sciences

The UK10K project identifies rare variants in health and disease

Klaudia Walter et al.

NATURE (2015)

Article Genetics & Heredity

Improved genome inference in the MHC using a population reference graph

Alexander Dilthey et al.

NATURE GENETICS (2015)

Article Multidisciplinary Sciences

Improving the Power of Structural Variation Detection by Augmenting the Reference

Jan Schroeder et al.

PLOS ONE (2015)

Article Biochemical Research Methods

Indexing Graphs for Path Queries with Applications in Genome Research

Jouni Siren et al.

IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS (2014)

Article Multidisciplinary Sciences

Indexes of Large Genome Collections on a PC

Agnieszka Danek et al.

PLOS ONE (2014)

Article Biochemical Research Methods

Genome compression: a novel approach for large collections

Sebastian Deorowicz et al.

BIOINFORMATICS (2013)

Article Biochemical Research Methods

Short read alignment with populations of genomes

Lin Huang et al.

BIOINFORMATICS (2013)

Article Multidisciplinary Sciences

Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics

Ekta Khurana et al.

SCIENCE (2013)

Article Biochemical Research Methods

Storage and Retrieval of Highly Repetitive Sequence Collections

Veli Makinen et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2010)

Article Multidisciplinary Sciences

International network of cancer genome projects

Thomas J. Hudson et al.

NATURE (2010)

Article Biochemical Research Methods

Fast and accurate short read alignment with Burrows-Wheeler transform

Heng Li et al.

BIOINFORMATICS (2009)

Article Biotechnology & Applied Microbiology

Simultaneous alignment of short reads against multiple genomes

Korbinian Schneeberger et al.

GENOME BIOLOGY (2009)

Article Biotechnology & Applied Microbiology

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Ben Langmead et al.

GENOME BIOLOGY (2009)

Article Biochemical Research Methods

SOAP: short oligonucleotide alignment program

Ruiqiang Li et al.

BIOINFORMATICS (2008)