相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Microbial consortium OEM1 cultivation for higher lignocellulose degradation and chlorophenol removal
Jiajin Liang et al.
RSC ADVANCES (2017)
Comparative evaluation of rRNA depletion procedures for the improved analysis of bacterial biofilm and mixed pathogen culture transcriptomes
Olga E. Petrova et al.
SCIENTIFIC REPORTS (2017)
Revealing the insoluble metasecretome of lignocellulose-degrading microbial communities
Anna M. Alessi et al.
SCIENTIFIC REPORTS (2017)
Targeted metatranscriptomics of compost-derived consortia reveals a GH11 exerting an unusual exo-1,4-β-xylanase activity
Bruno L. Mello et al.
BIOTECHNOLOGY FOR BIOFUELS (2017)
Microbial degradation of lignocellulosic fractions during drum composting of mixed organic waste
Vempalli Sudharsan Varma et al.
SUSTAINABLE ENVIRONMENT RESEARCH (2017)
Characterization of three plant biomass-degrading microbial consortia by metagenomics- and metasecretomics-based approaches
Diego Javier Jimenez et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2016)
Different inocula produce distinctive microbial consortia with similar lignocellulose degradation capacity
Larisa Cortes-Tolalpa et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2016)
Metagenomic analysis of microbial consortia enriched from compost: new insights into the role of Actinobacteria in lignocellulose decomposition
Cheng Wang et al.
BIOTECHNOLOGY FOR BIOFUELS (2016)
Microbial community structure and dynamics in thermophilic composting viewed through metagenomics and metatranscriptomics
Luciana Principal Antunes et al.
SCIENTIFIC REPORTS (2016)
Cellulose-Enriched Microbial Communities from Leaf-Cutter Ant (Atta colombica) Refuse Dumps Vary in Taxonomic Composition and Degradation Ability
Gina R. Lewin et al.
PLOS ONE (2016)
Composting-Like Conditions Are More Efficient for Enrichment and Diversity of Organisms Containing Cellulase-Encoding Genes than Submerged Cultures
Senta Heiss-Blanquet et al.
PLOS ONE (2016)
Nutrient availability shapes the microbial community structure in sugarcane bagasse compost-derived consortia
Bruno L. Mello et al.
SCIENTIFIC REPORTS (2016)
Comparative analysis of sugarcane bagasse metagenome reveals unique and conserved biomass-degrading enzymes among lignocellulolytic microbial communities
Wuttichai Mhuantong et al.
BIOTECHNOLOGY FOR BIOFUELS (2015)
Metasecretome analysis of a lignocellulolytic microbial consortium grown on wheat straw, xylan and xylose
Diego Javier Jimenez et al.
BIOTECHNOLOGY FOR BIOFUELS (2015)
Downregulation of GAUT12 in Populus deltoides by RNA silencing results in reduced recalcitrance, increased growth and reduced xylan and pectin in a woody biofuel feedstock
Ajaya K. Biswal et al.
BIOTECHNOLOGY FOR BIOFUELS (2015)
Sequencing and beyond: integrating molecular 'omics' for microbial community profiling
Eric A. Franzosa et al.
NATURE REVIEWS MICROBIOLOGY (2015)
Unveiling the metabolic potential of two soil-derived microbial consortia selected on wheat straw
Diego Javier Jimenez et al.
SCIENTIFIC REPORTS (2015)
The Role of Ciliate Protozoa in the Rumen
Charles J. Newbold et al.
FRONTIERS IN MICROBIOLOGY (2015)
Impacts of environmental stress on growth, secondary metabolite biosynthetic gene clusters and metabolite production of xerotolerant/xerophilic fungi
Angel Medina et al.
CURRENT GENETICS (2015)
Comparative metagenomic and metatranscriptomic analyses of microbial communities in acid mine drainage
Lin-xing Chen et al.
ISME JOURNAL (2015)
Substrate-Specific Development of Thermophilic Bacterial Consortia by Using Chemically Pretreated Switchgrass
Stephanie A. Eichorst et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Identification of Novel Biomass-Degrading Enzymes From Genomic Dark Matter: Populating Genomic Sequence Space With Functional Annotation
Hailan Piao et al.
BIOTECHNOLOGY AND BIOENGINEERING (2014)
Exploring the functional soil-microbe interface and exoenzymes through soil metaexoproteomics
Ashley S. Johnson-Rollings et al.
ISME JOURNAL (2014)
Effect of inoculum source on the enrichment of microbial communities on two lignocellulosic bioenergy crops under thermophilic and high-solids conditions
C. W. Simmons et al.
JOURNAL OF APPLIED MICROBIOLOGY (2014)
Characterization of the 18S rRNA Gene for Designing Universal Eukaryote Specific Primers
Kenan Hadziavdic et al.
PLOS ONE (2014)
Thermophilic microbial cellulose decomposition and methanogenesis pathways recharacterized by metatranscriptomic and metagenomic analysis
Yu Xia et al.
SCIENTIFIC REPORTS (2014)
Tracking organic matter and microbiota dynamics during the stages of lignocellulosic waste composting
Juan A. Lopez-Gonzalez et al.
BIORESOURCE TECHNOLOGY (2013)
Prokaryotic successions and diversity in composts as revealed by 454-pyrosequencing
Vidya de Gannes et al.
BIORESOURCE TECHNOLOGY (2013)
Lignocellulose-degrading enzymes from termites and their symbiotic microbiota
Jinfeng Ni et al.
BIOTECHNOLOGY ADVANCES (2013)
Analysis of pectin mutants and natural accessions of Arabidopsis highlights the impact of de-methyl-esterified homogalacturonan on tissue saccharification
Fedra Francocci et al.
BIOTECHNOLOGY FOR BIOFUELS (2013)
Gut microbiota disturbance during antibiotic therapy: a multi-omic approach
Ana Elena Perez-Cobas et al.
GUT (2013)
Diversity of protists and bacteria determines predation performance and stability
Muhammad Saleem et al.
ISME JOURNAL (2013)
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
Anna Klindworth et al.
NUCLEIC ACIDS RESEARCH (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
Metagenomic Analysis of a Tropical Composting Operation at the Sao Paulo Zoo Park Reveals Diversity of Biomass Degradation Functions and Organisms
Layla Farage Martins et al.
PLOS ONE (2013)
Changes in Bacterial and Fungal Communities across Compost Recipes, Preparation Methods, and Composting Times
Deborah A. Neher et al.
PLOS ONE (2013)
Insights into fungal communities in composts revealed by 454-pyrosequencing: implications for human health and safety
Vidya De Gannes et al.
FRONTIERS IN MICROBIOLOGY (2013)
Tracking dynamics of plant biomass composting by changes in substrate structure, microbial community, and enzyme activity
Hui Wei et al.
BIOTECHNOLOGY FOR BIOFUELS (2012)
Who is who in litter decomposition? Metaproteomics reveals major microbial players and their biogeochemical functions
Thomas Schneider et al.
ISME JOURNAL (2012)
Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill
Olivia U. Mason et al.
ISME JOURNAL (2012)
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks
Cole Trapnell et al.
NATURE PROTOCOLS (2012)
dbCAN: a web resource for automated carbohydrate-active enzyme annotation
Yanbin Yin et al.
NUCLEIC ACIDS RESEARCH (2012)
Metatranscriptomics Reveals the Diversity of Genes Expressed by Eukaryotes in Forest Soils
Coralie Damon et al.
PLOS ONE (2012)
The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes
Dimitrios Floudas et al.
SCIENCE (2012)
Substrate-Controlled Succession of Marine Bacterioplankton Populations Induced by a Phytoplankton Bloom
Hanno Teeling et al.
SCIENCE (2012)
Chemical and morphological characterization of sugarcane bagasse submitted to a delignification process for enhanced enzymatic digestibility
Camila Alves Rezende et al.
BIOTECHNOLOGY FOR BIOFUELS (2011)
WebMGA: a customizable web server for fast metagenomic sequence analysis
Sitao Wu et al.
BMC GENOMICS (2011)
Examining the global distribution of dominant archaeal populations in soil
Scott T. Bates et al.
ISME JOURNAL (2011)
Full-length transcriptome assembly from RNA-Seq data without a reference genome
Manfred G. Grabherr et al.
NATURE BIOTECHNOLOGY (2011)
Computational methods for transcriptome annotation and quantification using RNA-seq
Manuel Garber et al.
NATURE METHODS (2011)
The Impact of a Consortium of Fermented Milk Strains on the Gut Microbiome of Gnotobiotic Mice and Monozygotic Twins
Nathan P. McNulty et al.
SCIENCE TRANSLATIONAL MEDICINE (2011)
Complete genome sequence of Truepera radiovictrix type strain (RQ-24(T))
Natalia Ivanova et al.
STANDARDS IN GENOMIC SCIENCES (2011)
Engineering the cell wall by reducing de-methyl-esterified homogalacturonan improves saccharification of plant tissues for bioconversion
Vincenzo Lionetti et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Lessons from the Terra Preta de Indios of the Amazon Region for the Utilisation of Charcoal for Soil Amendment
Etelvino H. Novotny et al.
JOURNAL OF THE BRAZILIAN CHEMICAL SOCIETY (2009)
Classification of the peritrich ciliate Opisthonecta matiensis (Martin-Cereceda et al. 1999) as Telotrochidium matiense nov comb., based on new observations and SSU rDNA phylogeny
Mercedes Martin-Cereceda et al.
EUROPEAN JOURNAL OF PROTISTOLOGY (2007)
The ecodist package for dissimilarity-based analysis of ecological data
Sarah C. Goslee et al.
JOURNAL OF STATISTICAL SOFTWARE (2007)
Exponentially modified protein abundance index (emPAI) for estimation of absolute protein amount in proteomics by the number of sequenced peptides per protein
Y Ishihama et al.
MOLECULAR & CELLULAR PROTEOMICS (2005)
Community proteomics of a natural microbial biofilm
RJ Ram et al.
SCIENCE (2005)
Microbial cellulose utilization: Fundamentals and biotechnology
LR Lynd et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2002)
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
A Krogh et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Chemical, structural, and thermal characterizations of alkali-soluble lignins and hemicelluloses, and cellulose from maize stems, rye straw, and rice straw
B Xiao et al.
POLYMER DEGRADATION AND STABILITY (2001)
Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition
RI Griffiths et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)
The mechanical properties and molecular dynamics of plant cell wall polysaccharides studied by Fourier-transform infrared spectroscopy
RH Wilson et al.
PLANT PHYSIOLOGY (2000)