期刊
CURRENT PLANT BIOLOGY
卷 7-8, 期 -, 页码 10-15出版社
ELSEVIER
DOI: 10.1016/j.cpb.2016.12.005
关键词
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资金
- Gramene database award [NSF IOS-1127112]
- Reactome database project [NIH: P41 HG003751, U54 GM114833, ENFIN LSHG-CT-2005-518254]
- Reactome database project (Ontario Research Fund)
- Reactome database project (EBI Industry Programme)
- Direct For Biological Sciences
- Division Of Integrative Organismal Systems [1127112] Funding Source: National Science Foundation
- ARS [813557, ARS-0425848] Funding Source: Federal RePORTER
Gramene (http://www.gramene.org) is an online, open source, curated resource for plant comparative genomics and pathway analysis designed to support researchers working in plant genomics, breeding, evolutionary biology, system biology, and metabolic engineering. It exploits phylogenetic relationships to enrich the annotation of genomic data and provides tools to perform powerful comparative analyses across a wide spectrum of plant species. It consists of an integrated portal for querying, visualizing and analyzing data for 44 plant reference genomes, genetic variation data sets for 12 species, expression data for 16 species, curated rice pathways and orthology-based pathway projections for 66 plant species including various crops. Here we briefly describe the functions and uses of the Gramene database. (C) 2016 The Authors. Published by Elsevier B.V.
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