相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Mariprofundus micogutta sp nov., a novel iron-oxidizing zetaproteobacterium isolated from a deep-sea hydrothermal field at the Bayonnaise knoll of the Izu-Ogasawara arc, and a description of Mariprofundales ord. nov and Zetaproteobacteria classis nov.
Hiroko Makita et al.
ARCHIVES OF MICROBIOLOGY (2017)
In-situ incubation of iron-sulfur mineral reveals a diverse chemolithoautotrophic community and a new biogeochemical role for Thiomicrospira
Roman A. Barco et al.
ENVIRONMENTAL MICROBIOLOGY (2017)
Hidden diversity revealed by genome-resolved metagenomics of iron-oxidizing microbial mats from Lo'ihi Seamount, Hawai'i
Heather Fullerton et al.
ISME JOURNAL (2017)
Comparative Genomic Analysis of the Class Epsilonproteobacteria and Proposed Reclassification to Epsilonbacteraeota (phyl. nov.)
David W. Waite et al.
FRONTIERS IN MICROBIOLOGY (2017)
A decade of volcanic construction and destruction at the summit of NW Rota-1 seamount: 2004-2014
Susan R. Schnur et al.
JOURNAL OF GEOPHYSICAL RESEARCH-SOLID EARTH (2017)
In situ estimates of iron-oxidation and accretion rates for iron-oxidizing bacterial mats at Loihi Seamount
David Emerson et al.
DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS (2017)
Metagenomic analysis of a high carbon dioxide subsurface microbial community populated by chemolithoautotrophs and bacteria and archaea from candidate phyla
Joanne B. Emerson et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Comparative Analysis of Microbial Communities in Iron-Dominated Flocculent Mats in Deep-Sea Hydrothermal Environments
Hiroko Makita et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2016)
Microbial interactions and community assembly at microscales
Otto X. Cordero et al.
CURRENT OPINION IN MICROBIOLOGY (2016)
The role of microaerophilic Fe-oxidizing micro-organisms in producing banded iron formations
C. S. Chan et al.
GEOBIOLOGY (2016)
Planktonic marine iron oxidizers drive iron mineralization under low-oxygen conditions
E. K. Field et al.
GEOBIOLOGY (2016)
Ecophysiology of Zetaproteobacteria Associated with Shallow Hydrothermal Iron-Oxyhydroxide Deposits in Nagahama Bay of Satsuma Iwo-Jima, Japan
Tatsuhiko Hoshino et al.
FRONTIERS IN MICROBIOLOGY (2016)
The Guaymas Basin Hiking Guide to Hydrothermal Mounds, Chimneys, and Microbial Mats: Complex Seafloor Expressions of Subsurface Hydrothermal Circulation
Andreas Teske et al.
FRONTIERS IN MICROBIOLOGY (2016)
The Architecture of Iron Microbial Mats Reflects the Adaptation of Chemolithotrophic Iron Oxidation in Freshwater and Marine Environments
Clara S. Chan et al.
FRONTIERS IN MICROBIOLOGY (2016)
Quantitative PCR Analysis of Functional Genes in Iron-Rich Microbial Mats at an Active Hydrothermal Vent System (L(o)over-bar'ihi Seamount, Hawai'i)
Kelsey J. Jesser et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
Chemical composition of hydrothermal fluids in the central and southern Mariana Trough backarc basin
Jun-ichiro Ishibashi et al.
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2015)
Basin-scale transport of hydrothermal dissolved metals across the South Pacific Ocean
Joseph A. Resing et al.
NATURE (2015)
Genomic insights into the uncultivated marine Zetaproteobacteria at Loihi Seamount
Erin K. Field et al.
ISME JOURNAL (2015)
From deep-sea volcanoes to human pathogens: a conserved quorum-sensing signal in Epsilonproteobacteria
Ileana Perez-Rodriguez et al.
ISME JOURNAL (2015)
Microbial Iron Mats at the Mid-Atlantic Ridge and Evidence that Zetaproteobacteria May Be Restricted to Iron-Oxidizing Marine Systems
Jarrod J. Scott et al.
PLOS ONE (2015)
Carbon adsorption onto Fe oxyhydroxide stalks produced by a lithotrophic iron-oxidizing bacteria
S. A. Bennett et al.
GEOBIOLOGY (2014)
Strain-level genomic variation in natural populations of Lebetimonas from an erupting deep-sea volcano
Julie L. Meyer et al.
ISME JOURNAL (2014)
Ribosomal Database Project: data and tools for high throughput rRNA analysis
James R. Cole et al.
NUCLEIC ACIDS RESEARCH (2014)
Spatial Ecology of Bacteria at the Microscale in Soil
Xavier Raynaud et al.
PLOS ONE (2014)
First Evidence for the Presence of Iron Oxidizing Zetaproteobacteria at the Levantine Continental Margins
Maxim Rubin-Blum et al.
PLOS ONE (2014)
Gene-centric approach to integrating environmental genomics and biogeochemical models
Daniel C. Reed et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Development of a Dual-Index Sequencing Strategy and Curation Pipeline for Analyzing Amplicon Sequence Data on the MiSeq Illumina Sequencing Platform
James J. Kozich et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
Microbial diversity and potential for arsenic and iron biogeochemical cycling at an arsenic rich, shallow-sea hydrothermal vent (Tutum Bay, Papua New Guinea)
D'Arcy R. Meyer-Dombard et al.
CHEMICAL GEOLOGY (2013)
Discovery of a new hydrothermal vent based on an underwater, high-resolution geophysical survey
Kentaro Nakamura et al.
DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS (2013)
Hidden in plain sight: discovery of sheath-forming, iron-oxidizing Zetaproteobacteria at Loihi Seamount, Hawaii, USA
Emily J. Fleming et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
Phylogenetic stratigraphy in the Guerrero Negro hypersaline microbial mat
J. Kirk Harris et al.
ISME JOURNAL (2013)
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
Anna Klindworth et al.
NUCLEIC ACIDS RESEARCH (2013)
The transition from freshwater to marine iron-oxidizing bacterial lineages along a salinity gradient on the Sheepscot River, Maine, USA
Joyce M. McBeth et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2013)
The microbiology of deep-sea hydrothermal vent plumes: ecological and biogeographic linkages to seafloor and water column habitats
Gregory J. Dick et al.
FRONTIERS IN MICROBIOLOGY (2013)
The Rare Bacterial Biosphere
Carlos Pedros-Alio
ANNUAL REVIEW OF MARINE SCIENCE, VOL 4 (2012)
A precision multi-sampler for deep-sea hydrothermal microbial mat studies
J. A. Breier et al.
DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS (2012)
Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
J. Gregory Caporaso et al.
ISME JOURNAL (2012)
Neutrophilic Iron-Oxidizing Zetaproteobacteria and Mild Steel Corrosion in Nearshore Marine Environments
Joyce M. McBeth et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Biodiversity and Emerging Biogeography of the Neutrophilic Iron-Oxidizing Zetaproteobacteria
Sean M. McAllister et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Catabolic and anabolic energy for chemolithoautotrophs in deep-sea hydrothermal systems hosted in different rock types
Jan P. Amend et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2011)
High SO2 flux, sulfur accumulation, and gas fractionation at an erupting submarine volcano
David A. Butterfield et al.
GEOLOGY (2011)
Ultra-diffuse hydrothermal venting supports Fe-oxidizing bacteria and massive umber deposition at 5000 m off Hawaii
Katrina J. Edwards et al.
ISME JOURNAL (2011)
Isolated communities of Epsilonproteobacteria in hydrothermal vent fluids of the Mariana Arc seamounts
Julie A. Huber et al.
FEMS MICROBIOLOGY ECOLOGY (2010)
Bacterial diversity in Fe-rich hydrothermal sediments at two South Tonga Arc submarine volcanoes
N. L. Forget et al.
GEOBIOLOGY (2010)
Phylogeny of Gammaproteobacteria
Kelly P. Williams et al.
JOURNAL OF BACTERIOLOGY (2010)
MICROBIOLOGY OF SEAMOUNTS Common Patterns Observed in Community Structure
David Emerson et al.
OCEANOGRAPHY (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Iron-oxidizing microbial ecosystems thrived in late Paleoproterozoic redox-stratified oceans
Noah Planavsky et al.
EARTH AND PLANETARY SCIENCE LETTERS (2009)
Abundance of Zetaproteobacteria within crustal fluids in back-arc hydrothermal fields of the Southern Mariana Trough
Shingo Kato et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Microbial communities in iron-silica-rich microbial mats at deep-sea hydrothermal fields of the Southern Mariana Trough
Shingo Kato et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Individual hydrothermal vents at Axial Seamount harbor distinct subseafloor microbial communities
Andrew D. Opatkiewicz et al.
FEMS MICROBIOLOGY ECOLOGY (2009)
Redox Speciation and Distribution within Diverse Iron-dominated Microbial Habitats at Loihi Seamount
Brian T. Glazer et al.
GEOMICROBIOLOGY JOURNAL (2009)
Statistical Methods for Detecting Differentially Abundant Features in Clinical Metagenomic Samples
James Robert White et al.
PLOS COMPUTATIONAL BIOLOGY (2009)
The Possible Origin and Persistence of Life on Enceladus and Detection of Biomarkers in the Plume
Christopher P. McKay et al.
ASTROBIOLOGY (2008)
Deep-sea vent chemoautotrophs: diversity, biochemistry and ecological significance
Satoshi Nakagawa et al.
FEMS MICROBIOLOGY ECOLOGY (2008)
Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach
David Andrew Fike et al.
ISME JOURNAL (2008)
Venting of a separate CO2-rich gas phase from submarine arc volcanoes:: Examples from the Mariana and Tonga-Kermadec arcs
John Lupton et al.
JOURNAL OF GEOPHYSICAL RESEARCH-SOLID EARTH (2008)
Extreme spatial and temporal variability of hydrothermal microbial mat communities along the Mariana Island Arc and southern Mariana back-arc system
Richard E. Davis et al.
JOURNAL OF GEOPHYSICAL RESEARCH-SOLID EARTH (2008)
Hydrothermal vents and the origin of life
William Martin et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
Qiong Wang et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)
A Novel Lineage of Proteobacteria Involved in Formation of Marine Fe-Oxidizing Microbial Mat Communities
David Emerson et al.
PLOS ONE (2007)
Methane- and sulfur-metabolizing microbial communities dominate the Lost City hydrothermal field ecosystem
William J. Brazelton et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Submarine venting of liquid carbon dioxide on a Mariana Arc volcano
John Lupton et al.
GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS (2006)
The versatile epsilon-proteobacteria: key players in sulphidic habitats
Barbara J. Campbell et al.
NATURE REVIEWS MICROBIOLOGY (2006)
Enzymatic and genetic characterization of carbon and energy metabolisms by deep-sea hydrothermal chemolithoautotrophic isolates of Epsilonproteobacteria
K Takai et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Distribution, phylogenetic diversity and physiological characteristics of epsilon-Proteobacteria in a deep-sea hydrothermal field
S Nakagawa et al.
ENVIRONMENTAL MICROBIOLOGY (2005)
Thioreductor micantisoli gen. nov., sp nov., a novel mesophilic, sulfur-reducing chemolithoautotroph within the ε-Proteobacteria isolated from hydrothermal sediments in the Mid-Okinawa Trough
S Nakagawa et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
A similarity measure based on species proportions
JC Yue et al.
COMMUNICATIONS IN STATISTICS-THEORY AND METHODS (2005)
Lebetimonas acidiphila gen. nov., sp nov., a novel thermophilic, acidophilic, hydrogen-oxidizing chemolithoautotroph within the Epsilonproteobacteria', isolated from a deep-sea hydrothermal fumarole in the Mariana Arc
K Takai et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Sulfurovum lithotrophicum gen. nov., sp nov., a novel sulfur-oxidizing chemolithoautotroph within the ε-Proteobacteria isolated from Okinawa Trough hydrothermal sediments
F Inagaki et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2004)
Sulfurimonas autotrophica gen. nov., sp nov., a novel sulfur-oxidizing epsilon-proteobacterium isolated from hydrothermal sediments in the Mid-Okinawa Trough
F Inagaki et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2003)
Family- and genus-level 16S rRNA-targeted oligonucleotide probes for ecological studies of methanotrophic bacteria
J Gulledge et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2001)
Thalassomonas viridans gen. nov., sp nov., a novel marine γ-proteobacterium
MC Macián et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2001)