相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。The IRES5′UTR of the dicistrovirus cricket paralysis virus is a type III IRES containing an essential pseudoknot structure
Lauriane Gross et al.
NUCLEIC ACIDS RESEARCH (2017)
Two ribosome recruitment sites direct multiple translation events within HIV1 Gag open reading frame
Jules Deforges et al.
NUCLEIC ACIDS RESEARCH (2017)
Human eIF3: from 'bIoboIogy' to biological insight
Jamie H. D. Cate
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2017)
Dynamics of IRES-mediated translation
Alex G. Johnson et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2017)
Giant viruses with an expanded complement of translation system components
Frederik Schulz et al.
SCIENCE (2017)
Regulation Mechanisms of Viral IRES-Driven Translation
Kuo-Ming Lee et al.
TRENDS IN MICROBIOLOGY (2017)
The analysis of translation-related gene set boosts debates around origin and evolution of mimiviruses
Jonatas Santos Abrahao et al.
PLOS GENETICS (2017)
Regulation of human immunodeficiency virus type 1 (HIV-1) mRNA translation
Laura Hidalgo et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2017)
Ribosome profiling and dynamic regulation of translation in mammals
Cedric Gobet et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2017)
Translational control and the cancer cell response to stress
Nathaniel Robichaud et al.
CURRENT OPINION IN CELL BIOLOGY (2017)
Concentric-flow electrokinetic injector enables serial crystallography of ribosome and photosystem II
Raymond G. Sierra et al.
NATURE METHODS (2016)
LOOP IIId of the HCV IRES is essential for the structural rearrangement of the 40S-HCV IRES complex
Jenniffer Angulo et al.
NUCLEIC ACIDS RESEARCH (2016)
Does HIV-1 mRNA 5′-untranslated region bear an internal ribosome entry site?
Victoria V. Smirnova et al.
BIOCHIMIE (2016)
Structural domains within the HIV-1 mRNA and the ribosomal protein S25 influence cap-independent translation initiation
Felipe Carvajal et al.
FEBS JOURNAL (2016)
Whither Ribosome Structure and Dynamics Research? (A Perspective)
Joachim Frank
JOURNAL OF MOLECULAR BIOLOGY (2016)
Modeling Three-Dimensional Structural Motifs of Viral IRES
Gloria Lozano et al.
JOURNAL OF MOLECULAR BIOLOGY (2016)
Commandeering the Ribosome: Lessons Learned from Dicistroviruses about Translation
Craig H. Kerr et al.
JOURNAL OF VIROLOGY (2016)
Multiple Parallel Pathways of Translation Initiation on the CrPV IRES
Alexey Petrov et al.
MOLECULAR CELL (2016)
eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation
Amy S. Y. Lee et al.
NATURE (2016)
Dynamics of ribosome scanning and recycling revealed by translation complex profiling
Stuart K. Archer et al.
NATURE (2016)
An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation
Shunsuke Imai et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)
Choreography of molecular movements during ribosome progression along mRNA
Riccardo Belardinelli et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)
Initiation on the divergent Type I cadicivirus IRES: factor requirements and interactions with the translation apparatus
Mukta Asnani et al.
NUCLEIC ACIDS RESEARCH (2016)
Attachment of ribosomal complexes and retrograde scanning during initiation on the Halastavi arva virus IRES
Irina S. Abaeva et al.
NUCLEIC ACIDS RESEARCH (2016)
Translational control by 5′-untranslated regions of eukaryotic mRNAs
Alan G. Hinnebusch et al.
SCIENCE (2016)
Assembly of eIF3 Mediated by Mutually Dependent Subunit Insertion
M. Duane Smith et al.
STRUCTURE (2016)
Biological function of Foot-and-mouth disease virus non-structural proteins and non-coding elements
Yuan Gao et al.
VIROLOGY JOURNAL (2016)
Temporal Regulation of Distinct Internal Ribosome Entry Sites of the Dicistroviridae Cricket Paralysis Virus
Anthony Khong et al.
VIRUSES-BASEL (2016)
An accurately preorganized IRES RNA structure enables eIF4G capture for initiation of viral translation
Shunsuke Imai et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)
Choreography of molecular movements during ribosome progression along mRNA
Riccardo Belardinelli et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2016)
Structural characterization of ribosome recruitment and translocation by type IV IRES
Jason Murray et al.
ELIFE (2016)
Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome
Priyanka D. Abeyrathne et al.
ELIFE (2016)
Kinetics of initiating polypeptide elongation in an IRES-dependent system
Haibo Zhang et al.
ELIFE (2016)
Translation initiation by the hepatitis C virus IRES requires eIF1A and ribosomal complex remodeling
Zane A. Jaafar et al.
ELIFE (2016)
A Cap-to-Tail Guide to mRNA Translation Strategies in Virus-Infected Cells
Eric Jan et al.
ANNUAL REVIEW OF VIROLOGY, VOL 3 (2016)
Molecular analysis of the factorless internal ribosome entry site in Cricket Paralysis virus infection
Craig H. Kerr et al.
SCIENTIFIC REPORTS (2016)
Hepatitis C Virus RNA Functionally Sequesters miR-122
Joseph M. Luna et al.
CELL (2015)
miR-122 Stimulates Hepatitis C Virus RNA Synthesis by Altering the Balance of Viral RNAs Engaged in Replication versus Translation
Takahiro Masaki et al.
CELL HOST & MICROBE (2015)
Molecular architecture of the ribosome-bound Hepatitis C Virus internal ribosomal entry site RNA
Hiroshi Yamamoto et al.
EMBO JOURNAL (2015)
Cryo-EM of Ribosomal 80S Complexes with Termination Factors Reveals the Translocated Cricket Paralysis Virus IRES
Margarita Muhs et al.
MOLECULAR CELL (2015)
Functional Dynamics within the Human Ribosome Regulate the Rate of Active Protein Synthesis
Angelica Ferguson et al.
MOLECULAR CELL (2015)
Structure of the human 80S ribosome
Heena Khatter et al.
NATURE (2015)
Initiation of translation in bacteria by a structured eukaryotic IRES RNA
Timothy M. Colussi et al.
NATURE (2015)
eIF3 targets cell-proliferation messenger RNAs for translational activation or repression
Amy S. Y. Lee et al.
NATURE (2015)
Structure of mammalian eIF3 in the context of the 43S preinitiation complex
Amedee des Georges et al.
NATURE (2015)
The beta hairpin structure within ribosomal protein S5 mediates interplay between domains II and IV and regulates HCV IRES function
Prasanna Bhat et al.
NUCLEIC ACIDS RESEARCH (2015)
Global shape mimicry of tRNA within a viral internal ribosome entry site mediates translational reading frame selection
Hilda H. Au et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Purification of mRNA-programmed translation initiation complexes suitable for mass spectrometry analysis
Johana Chicher et al.
PROTEOMICS (2015)
Gene activity in primary T cells infected with HIV89.6: intron retention and induction of genomic repeats
Scott Sherrill-Mix et al.
RETROVIROLOGY (2015)
Structural Dynamics of Ribosome Subunit Association Studied by Mixing-Spraying Time-Resolved Cryogenic Electron Microscopy
Bo Chen et al.
STRUCTURE (2015)
Widespread distribution and structural diversity of Type IV IRESs in members of Picornaviridae
Mukta Asnani et al.
VIROLOGY (2015)
Picornavirus IRES elements: RNA structure and host protein interactions
Encarnacion Martinez-Salas et al.
VIRUS RESEARCH (2015)
cis-Acting RNA elements in the hepatitis C virus RNA genome
Selena M. Sagan et al.
VIRUS RESEARCH (2015)
Cryo-EM structure of Hepatitis C virus IRES bound to the human ribosome at 3.9-Å resolution
Nick Quade et al.
NATURE COMMUNICATIONS (2015)
Structural insights into viral IRES-dependent translation mechanisms
Gloria Lozano et al.
CURRENT OPINION IN VIROLOGY (2015)
A dynamic RNA loop in an IRES affects multiple steps of elongation factor mediated translation initiation
Marisa D. Ruehle et al.
ELIFE (2015)
Picornaviruses and nuclear functions: targeting a cellular compartment distinct from the replication site of a positive-strand RNA virus
Dylan Flather et al.
FRONTIERS IN MICROBIOLOGY (2015)
Exploring internal ribosome entry sites as therapeutic targets
Anton A. Komar et al.
FRONTIERS IN ONCOLOGY (2015)
Kinetic pathway of 40S ribosomal subunit recruitment to hepatitis C virus internal ribosome entry site
Gabriele Fuchs et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Understanding the potential of hepatitis C virus internal ribosome entry site domains to modulate translation initiation via their structure and function
Anas Khawaja et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2015)
The Scanning Mechanism of Eukaryotic Translation Initiation
Alan G. Hinnebusch
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 83 (2014)
Molecular Architecture of the 40S • eIF1 • eIF3 Translation Initiation Complex
Jan P. Erzberger et al.
CELL (2014)
Initiation of Translation by Cricket Paralysis Virus IRES Requires Its Translocation in the Ribosome
Israel S. Fernandez et al.
CELL (2014)
RACK1 Controls IRES-Mediated Translation of Viruses
Karim Majzoub et al.
CELL (2014)
Structural Changes Enable Start Codon Recognition by the Eukaryotic Translation Initiation Complex
Tanweer Hussain et al.
CELL (2014)
Hepatitis C Virus Subverts Liver-Specific miR-122 to Protect the Viral Genome from Exoribonuclease Xrn2
Cecilia D. Sedano et al.
CELL HOST & MICROBE (2014)
Shedding light on protein folding landscapes by single-molecule fluorescence
Priya R. Banerjee et al.
CHEMICAL SOCIETY REVIEWS (2014)
The mechanism of translation initiation on Type 1 picornavirus IRESs
Trevor R. Sweeney et al.
EMBO JOURNAL (2014)
Hepatitis C Virus Translation Inhibitors Targeting the Internal Ribosomal Entry Site
Sergey M. Dibrov et al.
JOURNAL OF MEDICINAL CHEMISTRY (2014)
Serial time-resolved crystallography of photosystem II using a femtosecond X-ray laser
Christopher Kupitz et al.
NATURE (2014)
Translational control of immune responses: from transcripts to translatomes
Ciriaco A. Piccirillo et al.
NATURE IMMUNOLOGY (2014)
Structure of the mammalian 80S initiation complex with initiation factor 5B on HCV-IRES RNA
Hiroshi Yamamoto et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2014)
Structural determinants of an internal ribosome entry site that direct translational reading frame selection
Qian Ren et al.
NUCLEIC ACIDS RESEARCH (2014)
Identification of novel non-canonical RNA-binding sites in Gemin5 involved in internal initiation of translation
Javier Fernandez-Chamorro et al.
NUCLEIC ACIDS RESEARCH (2014)
HIV-1 Transcripts Use IRES-Initiation under Conditions Where Cap-Dependent Translation Is Restricted by Poliovirus 2A Protease
Raquel Amorim et al.
PLOS ONE (2014)
Opportunities and challenges for time-resolved studies of protein structural dynamics at X-ray free-electron lasers
Richard Neutze
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2014)
High-throughput platform for real-time monitoring of biological processes by multicolor single-molecule fluorescence
Jin Chen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Functional conservation despite structural divergence in ligand-responsive RNA switches
Mark A. Boerneke et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Taura syndrome virus IRES initiates translation by binding its tRNA-mRNA-like structural element in the ribosomal decoding center
Cha San Koh et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Base pairing between hepatitis C virus RNA and 18S rRNA is required for IRES-dependent translation initiation in vivo
Daiki Matsuda et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Re-analysis of cryoEM data on HCV IRES bound to 40S subunit of human ribosome integrated with recent structural information suggests new contact regions between ribosomal proteins and HCV RNA
Agnel Praveen Joseph et al.
RNA BIOLOGY (2014)
Functional analysis of Kaposi's sarcoma-associated herpesvirus vFLIP expression reveals a new mode of IRES-mediated translation
Zulkefley Othman et al.
RNA (2014)
Structural Basis of the Translational Elongation Cycle
Rebecca M. Voorhees et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 82 (2013)
Rapid purification of ribosomal particles assembled on histone H4 mRNA: a new method based on mRNA DNA chimaeras
Lydia Prongidi-Fix et al.
BIOCHEMICAL JOURNAL (2013)
Structure of the Mammalian Ribosomal 43S Preinitiation Complex Bound to the Scanning Factor DHX29
Yaser Hashem et al.
CELL (2013)
Evolutionary conserved motifs constrain the RNA structure organization of picornavirus IRES
Noemi Fernandez et al.
FEBS LETTERS (2013)
RNA-Binding Proteins Impacting on Internal Initiation of Translation
Encarnacion Martinez-Salas et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2013)
Global RNA Structure Analysis of Poliovirus Identifies a Conserved RNA Structure Involved in Viral Replication and Infectivity
Cecily P. Burrill et al.
JOURNAL OF VIROLOGY (2013)
Ribosomal Protein S25 Dependency Reveals a Common Mechanism for Diverse Internal Ribosome Entry Sites and Ribosome Shunting
Marla I. Hertz et al.
MOLECULAR AND CELLULAR BIOLOGY (2013)
Hepatitis-C-virus-like internal ribosome entry sites displace eIF3 to gain access to the 40S subunit
Yaser Hashem et al.
NATURE (2013)
HCV IRES manipulates the ribosome to promote the switch from translation initiation to elongation
Megan E. Filbin et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2013)
Cell type specificity and structural determinants of IRES activity from the 5' leaders of different HIV-1 transcripts
Terra-Dawn M. Plank et al.
NUCLEIC ACIDS RESEARCH (2013)
HCV IRES interacts with the 18S rRNA to activate the 40S ribosome for subsequent steps of translation initiation
Alexey A. Malygin et al.
NUCLEIC ACIDS RESEARCH (2013)
Two RNA-binding motifs in eIF3 direct HCV IRES-dependent translation
Chaomin Sun et al.
NUCLEIC ACIDS RESEARCH (2013)
Dual Mechanisms of Translation Initiation of the Full-Length HIV-1 mRNA Contribute to Gag Synthesis
Anne Monette et al.
PLOS ONE (2013)
An RNA folding motif : GNRA tetraloop-receptor interactions
Julie L. Fiore et al.
QUARTERLY REVIEWS OF BIOPHYSICS (2013)
Elongation Factor G Bound to the Ribosome in an Intermediate State of Translocation
David S. Tourigny et al.
SCIENCE (2013)
Dynamic Recognition of the mRNA Cap by Saccharomyces cerevisiae eIF4E
Sean E. O'Leary et al.
STRUCTURE (2013)
Translation initiation is driven by different mechanisms on the HIV-1 and HIV-2 genomic RNAs
Sylvain de Breyne et al.
VIRUS RESEARCH (2013)
Structure of the full-length HCV IRES in solution
Julien Perard et al.
NATURE COMMUNICATIONS (2013)
The Cellular EJC Interactome Reveals Higher-Order mRNP Structure and an EJC-SR Protein Nexus
Guramrit Singh et al.
CELL (2012)
Unraveling the dynamics of ribosome translocation
Jin Chen et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2012)
Identification of a Novel Feline Picornavirus from the Domestic Cat
Susanna K. P. Lau et al.
JOURNAL OF VIROLOGY (2012)
Global landscape of HIV-human protein complexes
Stefanie Jaeger et al.
NATURE (2012)
Heterogeneous pathways and timing of factor departure during translation initiation
Albert Tsai et al.
NATURE (2012)
Functional and Structural Analysis of the Internal Ribosome Entry Site Present in the mRNA of Natural Variants of the HIV-1
Maricarmen Vallejos et al.
PLOS ONE (2012)
Translation Directed by Hepatitis A Virus IRES in the Absence of Active eIF4F Complex and eIF2
Natalia Redondo et al.
PLOS ONE (2012)
Insights into Factorless Translational Initiation by the tRNA-Like Pseudoknot Domain of a Viral IRES
Hilda H. T. Au et al.
PLOS ONE (2012)
Stabilization of hepatitis C virus RNA by an Ago2-miR-122 complex
Tetsuro Shimakami et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Alternative reading frame selection mediated by a tRNA-like domain of an internal ribosome entry site
Qian Ren et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Stimulation of Hepatitis C Virus RNA translation by microRNA-122 occurs under different conditions in vivo and in vitro
Dagmar Goergen et al.
VIRUS RESEARCH (2012)
Thriving under Stress: Selective Translation of HIV-1 Structural Protein mRNA during Vpr-Mediated Impairment of eIF4E Translation Activity
Amit Sharma et al.
PLOS PATHOGENS (2012)
Cellular IRES-mediated translation The war of ITAFs in pathophysiological states
Anton A. Komar et al.
CELL CYCLE (2011)
eIF2A mediates translation of hepatitis C viral mRNA under stress conditions
Joon Hyun Kim et al.
EMBO JOURNAL (2011)
Complete Genome Analysis of Three Novel Picornaviruses from Diverse Bat Species
Susanna K. P. Lau et al.
JOURNAL OF VIROLOGY (2011)
Cap-Assisted Internal Initiation of Translation of Histone H4
Franck Martin et al.
MOLECULAR CELL (2011)
Femtosecond X-ray protein nanocrystallography
Henry N. Chapman et al.
NATURE (2011)
Global quantification of mammalian gene expression control
Bjoern Schwanhaeusser et al.
NATURE (2011)
Viral subversion of the host protein synthesis machinery
Derek Walsh et al.
NATURE REVIEWS MICROBIOLOGY (2011)
mRNA helicases: the tacticians of translational control
Armen Parsyan et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2011)
The activity of the HIV-1 IRES is stimulated by oxidative stress and controlled by a negative regulatory element
Karine Gendron et al.
NUCLEIC ACIDS RESEARCH (2011)
A conserved structure within the HIV gag open reading frame that controls translation initiation directly recruits the 40S subunit and eIF3
Nicolas Locker et al.
NUCLEIC ACIDS RESEARCH (2011)
In vivo functional analysis of the Dicistroviridae intergenic region internal ribosome entry sites
Marla I. Hertz et al.
NUCLEIC ACIDS RESEARCH (2011)
Structural basis for the binding of IRES RNAs to the head of the ribosomal 40S subunit
Margarita Muhs et al.
NUCLEIC ACIDS RESEARCH (2011)
miR-122 activates hepatitis C virus translation by a specialized mechanism requiring particular RNA components
Ashley P. E. Roberts et al.
NUCLEIC ACIDS RESEARCH (2011)
Common conformational changes induced in type 2 picornavirus IRESs by cognate trans-acting factors
Yingpu Yu et al.
NUCLEIC ACIDS RESEARCH (2011)
Activity of the human immunodeficiency virus type 1 cell cycle-dependent internal ribosomal entry site is modulated by IRES trans-acting factors
Maricarmen Vallejos et al.
NUCLEIC ACIDS RESEARCH (2011)
Novel Positive-Sense, Single-Stranded RNA ( plus ssRNA) Virus with Di-Cistronic Genome from Intestinal Content of Freshwater Carp (Cyprinus carpio)
Akos Boros et al.
PLOS ONE (2011)
Crystal structures of complexes containing domains from two viral internal ribosome entry site (IRES) RNAs bound to the 70S ribosome
Jianyu Zhu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Functional reconstitution of human eukaryotic translation initiation factor 3 (eIF3)
Chaomin Sun et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
HCV IRES domain IIb affects the configuration of coding RNA in the 40S subunit's decoding groove
Megan E. Filbin et al.
RNA (2011)
Crystal Structure of the HCV IRES Central Domain Reveals Strategy for Start-Codon Positioning
Katherine E. Berry et al.
STRUCTURE (2011)
The role of IRES trans-acting factors in regulating translation initiation
Helen A. King et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2010)
Polypyrimidine tract-binding protein stimulates the poliovirus IRES by modulating eIF4G binding
Panagiota Kafasla et al.
EMBO JOURNAL (2010)
GTP-independent tRNA Delivery to the Ribosomal P-site by a Novel Eukaryotic Translation Factor
Sergey E. Dmitriev et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Distinct Regions of Human eIF3 Are Sufficient for Binding to the HCV IRES and the 40S Ribosomal Subunit
Qi Cai et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Mechanism of Initiation Site Selection Promoted by the Human Rhinovirus 2 Internal Ribosome Entry Site
Ann Kaminski et al.
JOURNAL OF VIROLOGY (2010)
Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites
Andreas H. Ratje et al.
NATURE (2010)
The mechanism of eukaryotic translation initiation and principles of its regulation
Richard J. Jackson et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2010)
A new type of IRES within gag coding region recruits three initiation complexes on HIV-2 genomic RNA
Laure Weill et al.
NUCLEIC ACIDS RESEARCH (2010)
Inhibitor-induced structural change in the HCV IRES domain IIa RNA
Ryan B. Paulsen et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
HIV-1 viral infectivity factor interacts with TP53 to induce G2 cell cycle arrest and positively regulate viral replication
Taisuke Izumi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Modular domains of the Dicistroviridae intergenic internal ribosome entry site
Christopher J. Jang et al.
RNA (2010)
The HCV IRES pseudoknot positions the initiation codon on the 40S ribosomal subunit
Katherine E. Berry et al.
RNA (2010)
Identification and characterization of anion binding sites in RNA
Jeffrey S. Kieft et al.
RNA (2010)
Regulation of Translation Initiation in Eukaryotes: Mechanisms and Biological Targets
Nahum Sonenberg et al.
CELL (2009)
RPS25 is essential for translation initiation by the Dicistroviridae and hepatitis C viral IRESs
Dori M. Landry et al.
GENES & DEVELOPMENT (2009)
Human Immunodeficiency Virus Type 1 (HIV-1) Induces the Cytoplasmic Retention of Heterogeneous Nuclear Ribonucleoprotein A1 by Disrupting Nuclear Import IMPLICATIONS FOR HIV-1 GENE EXPRESSION
Anne Monette et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2009)
Mg2+ modulation of EMCV IRES key activity fragment equilibria and r(G•C) base-pair kinetics
J. A. Dupont et al.
JOURNAL OF BIOLOGICAL PHYSICS (2009)
Analysis of Four-Way Junctions in RNA Structures
Christian Laing et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Conserved Element of the Dicistrovirus IGR IRES that Mimics an E-site tRNA/Ribosome Interaction Mediates Multiple Functions
Christopher J. Jang et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Polypyrimidine Tract Binding Protein Stabilizes the Encephalomyocarditis Virus IRES Structure via Binding Multiple Sites in a Unique Orientation
Panagiota Kafasla et al.
MOLECULAR CELL (2009)
The pathway of hepatitis C virus mRNA recruitment to the human ribosome
Christopher S. Fraser et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)
Far upstream element binding protein 2 interacts with enterovirus 71 internal ribosomal entry site and negatively regulates viral translation
Jing-Yi Lin et al.
NUCLEIC ACIDS RESEARCH (2009)
In vitro characterization of a miR-122-sensitive double-helical switch element in the 5′ region of hepatitis C virus RNA
Rosa Diaz-Toledano et al.
NUCLEIC ACIDS RESEARCH (2009)
HIV-1 Protease Inhibits Cap- and Poly(A)-Dependent Translation upon eIF4GI and PABP Cleavage
Alfredo Castello et al.
PLOS ONE (2009)
Direct functional interaction of initiation factor eIF4G with type 1 internal ribosomal entry sites
Sylvain de Breyne et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Mechanism of HIV-1 Tat RNA translation and its activation by the Tat protein
Nicolas Charnay et al.
RETROVIROLOGY (2009)
The Elav-like protein HuR exerts translational control of viral internal ribosome entry sites
Andrea Rivas-Aravena et al.
VIROLOGY (2009)
Altered interactions between stem-loop IV within the 5′ noncoding region of coxsackievirus RNA and poly(rC) binding protein 2: Effects on IRES-mediated translation and viral infectivity
Polen Sean et al.
VIROLOGY (2009)
Bioinformatic evidence for a stem-loop structure 5′-adjacent to the IGR-IRES and for an overlapping gene in the bee paralysis dicistroviruses
Andrew E. Firth et al.
VIROLOGY JOURNAL (2009)
An atypical IRES within the 5′ UTR of a dicistrovirus genome
Lisa O. Roberts et al.
VIRUS RESEARCH (2009)
Structure of hepatitis C virus IRES subdomain IIa
Qiang Zhao et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2008)
Translation Initiation on Mammalian mRNAs with Structured 5′UTRs Requires DExH-Box Protein DHX29
Vera P. Pisareva et al.
CELL (2008)
eIF2-dependent and eIF2-independent modes of initiation on the CSFVIRES: a common role of domain II
Tatyana V. Pestova et al.
EMBO JOURNAL (2008)
microRNA-122 stimulates translation of hepatitis C virus RNA
Jura Inga Henke et al.
EMBO JOURNAL (2008)
Eukaryotic translation initiation machinery can operate in a bacterial-like mode without eIF2
Ilya M. Terenin et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3
Min Zhou et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Viral IRES RNA structures and ribosome interactions
Jeffrey S. Kieft
TRENDS IN BIOCHEMICAL SCIENCES (2008)
A pathogenic picorna-like virus from the endoparasitoid wasp, Pteromalus puparum: Initial discovery and partial genomic characterization
Jia-Ying Zhu et al.
VIRUS RESEARCH (2008)
tRNA-mRNA mimicry drives translation initiation from a viral IRES
David A. Costantino et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
Internal initiation of translation from the human rhinovirus-2 internal ribosome entry site requires the binding of Unr to two distinct sites on the 5′ untranslated region
Emma C. Anderson et al.
JOURNAL OF GENERAL VIROLOGY (2007)
Replication of poliovirus requires binding of the poly(rC) binding protein to the cloverleaf as well as to the adjacent C-rich spacer sequence between the cloverleaf and the internal ribosomal entry site
Hidemi Toyoda et al.
JOURNAL OF VIROLOGY (2007)
Cellular protein modification by poliovirus: The two faces of Poly(rC)-binding protein
Rushika Perera et al.
JOURNAL OF VIROLOGY (2007)
Differential factor requirement to assemble translation initiation complexes at the alternative start codons of foot- and-mouth disease virus RNA
Dmitri E. Andreev et al.
RNA (2007)
Conservation and diversity among the three-dimensional folds of the Dicistroviridae intergenic region IRESes
Jennifer S. Pfingsten et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Characterization of a cyanobacterial RNase P ribozyme recognition motif in the IRES of foot-and-mouth disease virus reveals a unique structural element
Paula Serrano et al.
RNA (2007)
A distinct group of hepacivirus/pestivirus-like internal ribosomal entry sites in members of diverse Picornavirus genera:: Evidence for modular exchange of functional noncoding RNA elements by recombination
Christopher U. T. Hellen et al.
JOURNAL OF VIROLOGY (2007)
Binding mode of the first aminoacyl-tRNA in translation initiation mediated by Plautia stali intestine virus internal ribosorne entry site
Hiroshi Yamamoto et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
HCV and CSFVIRES domain II mediate eIF2 release during 80S ribosome assembly
Nicolas Locker et al.
EMBO JOURNAL (2007)
Structure of the 5′ nontranslated region of the coxsackievirus B3 genome:: Chemical modification and comparative sequence analysis
Jennifer M. Bailey et al.
JOURNAL OF VIROLOGY (2007)
Functional architecture of HCVIRES domain II stabilized by divalent metal ions in the crystal and in solution
Sergey M. Dibrov et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2007)
Structural and mechanistic insights into hepatitis C viral translation initiation
Christopher S. Fraser et al.
NATURE REVIEWS MICROBIOLOGY (2007)
Structure of the ribosome-bound cricket paralysis virus IRES RNA
Martin Schueler et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2006)
Structural basis for ribosome recruitment and manipulation by a viral IRES RNA
Jennifer S. Pfingsten et al.
SCIENCE (2006)
eIF3: a versatile scaffold for translation initiation complexes
Alan G. Hinnebusch
TRENDS IN BIOCHEMICAL SCIENCES (2006)
Genome sequence and molecular characterization of Homalodisca coagulata virus-1, a novel virus discovered in the glassy-winged sharpshooter (Hemiptera: Cicadellidae)
Laura E. Hunnicutt et al.
VIROLOGY (2006)
HIV protease cleaves poly(A)-binding protein
E Alvarez et al.
BIOCHEMICAL JOURNAL (2006)
Initiation factor-independent translation mediated by the hepatitis C virus internal ribosome entry site
AM Lancaster et al.
RNA (2006)
Hepatitis C virus-related internal ribosome entry sites are found in multiple genera of the family Picornaviridae
LS Chard et al.
JOURNAL OF GENERAL VIROLOGY (2006)
Evidence of reciprocal tertiary interactions between conserved motifs involved in organizing RNA structure essential for internal initiation of translation
O Fernández-Miragall et al.
RNA (2006)
Structural roles for human translation factor eIF3 in initiation of protein synthesis
B Siridechadilok et al.
SCIENCE (2005)
Accessibility of 18S rRNA in human 40S subunits and 80S ribosomes at physiological magnesium ion concentrations - implications for the study of ribosome dynamics
CL Shenvi et al.
RNA (2005)
mTOR and S6K1 mediate assembly of the translation preinitiation complex through dynamic protein interchange and ordered phosphorylation events
MK Holz et al.
CELL (2005)
Structure of the hepatitis C virus IRES bound to the human 80S ribosome: Remodeling of the HCVIRES
D Boehringer et al.
STRUCTURE (2005)
HIV-2 genomic RNA contains a novel type of IRES located downstream of its initiation codon
CH Herbreteau et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2005)
Modulation of hepatitis C virus RNA abundance by a liver-specific microRNA
CL Jopling et al.
SCIENCE (2005)
A cross-kingdom internal ribosome entry site reveals a simplified mode of internal ribosome entry
IM Terenin et al.
MOLECULAR AND CELLULAR BIOLOGY (2005)
Unravelling hepatitis C virus replication from genome to function
BD Lindenbach et al.
NATURE (2005)
Characterization of internal ribosomal entry sites of Triatoma virus
C Czibener et al.
JOURNAL OF GENERAL VIROLOGY (2005)
A preformed compact ribosome-binding domain in the cricket paralysis-like virus IRES RNAs
D Costantino et al.
RNA (2005)
Factor-independent assembly of elongation-competent ribosomes by an internal ribosome entry site located in an RNA virus that infects penaeid shrimp
RC Cevallos et al.
JOURNAL OF VIROLOGY (2005)
Structural variant of the intergenic internal ribosome entry site elements in dicistroviruses and computational search for their counterparts
Y Hatakeyama et al.
RNA (2004)
Molecular mechanisms of attenuation of the Sabin strain of poliovirus type 3
S Guest et al.
JOURNAL OF VIROLOGY (2004)
Position of the CrPVIRES on the 40S subunit and factor dependence of IRES/80S ribosome assembly
TV Pestova et al.
EMBO REPORTS (2004)
Riboproteomics of the hepatitis C virus internal ribosomal entry site
H Lu et al.
JOURNAL OF PROTEOME RESEARCH (2004)
Cryo-EM visualization of a viral internal ribosome entry site bound to human ribosomes: The IRES functions as an RNA-Based translation factor
CMT Spahn et al.
CELL (2004)
Coordinated assembly of human translation initiation complexes by the hepatitis C virus internal ribosome entry site RNA
H Ji et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
NMR studies of the structure and Mg2+ binding properties of a conserved RNA motif of EMCV picornavirus IRES element
M Phelan et al.
NUCLEIC ACIDS RESEARCH (2004)
The pathway of HCVIRES-mediated translation initiation
GA Otto et al.
CELL (2004)
Mutational and structural analysis of stem-loop IIIc of the hepatitis C virus and GB virus B internal ribosome entry sites
R Rijnbrand et al.
JOURNAL OF MOLECULAR BIOLOGY (2004)
NMR structures of loop B RNAs from the stem-loop IV domain of the Enterovirus internal ribosome entry site:: A single C to U substitution drastically changes the shape and flexibility of RNA
ZH Du et al.
BIOCHEMISTRY (2004)
Divergent tRNA-like element supports initiation, elongation, and termination of protein biosynthesis
E Jan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
The eukaryotic translation initiation factor 4GI is cleaved by different retroviral proteases
E Alvarez et al.
JOURNAL OF VIROLOGY (2003)
Structural organization of a viral IRES depends on the integrity of the GNRA motif
O Fernández-Miragall et al.
RNA (2003)
Structural elements in the internal ribosome entry site of Plautia stali intestine virus responsible for binding with ribosomes
T Nishiyama et al.
NUCLEIC ACIDS RESEARCH (2003)
The leader of human immunodeficiency virus type 1 genomic RNA harbors an internal ribosome entry segment that is active during the G2/M phase of the cell cycle
A Brasey et al.
JOURNAL OF VIROLOGY (2003)
Translation elongation after assembly ribosomes on the Cricket paralysis virus internal ribosomal entry site without initiation factors or initiator tRNA
TV Pestova et al.
GENES & DEVELOPMENT (2003)
Cleavage of eIF4G by HIV-1 protease: effects on translation
C Perales et al.
FEBS LETTERS (2003)
Structure of HCVIRES domain II determined by NMR
PJ Lukavsky et al.
NATURE STRUCTURAL BIOLOGY (2003)
Factorless ribosome assembly on the internal ribosome entry site of cricket paralysis virus
E Jan et al.
JOURNAL OF MOLECULAR BIOLOGY (2002)
Sequence analysis and genomic organization of Aphid lethal paralysis virus:: a new member of the family Dicistroviridae
M van Munster et al.
JOURNAL OF GENERAL VIROLOGY (2002)
Poliovirus internal ribosome entry segment structure alterations that specifically affect function in neuronal cells:: Molecular genetic analysis
CE Malnou et al.
JOURNAL OF VIROLOGY (2002)
Unique characteristics of a picornavirus internal ribosome entry site from the porcine teschovirus-1 talfan
Y Kaku et al.
JOURNAL OF VIROLOGY (2002)
Ribosomal proteins mediate the hepatitis C virus IRES-HeLa 40S interaction
GA Otto et al.
RNA (2002)
Pestivirus Internal Ribosome Entry Site (IRES) structure and function:: Elements in the 5′ untranslated region important for IRES function
SP Fletcher et al.
JOURNAL OF VIROLOGY (2002)
Accurate translocation of mRNA by the ribosome requires a peptidyl group or its analog on the tRNA moving into the 30S P site
K Fredrick et al.
MOLECULAR CELL (2002)
In vitro cleavage of eIF4GI but not eIF4GII by HIV-1 protease and its effects on translation in the rabbit reticulocyte lysate system
T Ohlmann et al.
JOURNAL OF MOLECULAR BIOLOGY (2002)
Shrimp Taura syndrome virus:: genomic characterization and similarity with members of the genus Cricket paralysis-like viruses
J Mari et al.
JOURNAL OF GENERAL VIROLOGY (2002)
Internal initiation in Saccharomyces cerevisiae mediated by an initiator tRNA/eIF2-independent internal ribosome entry site element
SR Thompson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
HIV-1 protease cleaves eukaryotic initiation factor 4G and inhibits cap-dependent translation
I Ventoso et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
The 5′ untranslated region of Rhopalosiphum padi virus contains an internal ribosome entry site which functions efficiently in mammalian, plant, and insect translation systems
KE Woolaway et al.
JOURNAL OF VIROLOGY (2001)
Detailed analysis of the requirements of hepatitis A virus internal ribosome entry segment for the eukaryotic initiation factor complex eIF4F
AM Borman et al.
JOURNAL OF VIROLOGY (2001)
IRES interaction with translation initiation factors:: Functional characterization of novel RNA contacts with eIF3, eIF4B, and eIF4GII
SL De Quinto et al.
RNA (2001)
Ribosomal protein S5 interacts with the internal ribosomal entry site of hepatitis C virus
S Fukushi et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2001)
Hepatitis C virus IRES RNA-induced changes in the conformation of the 40S ribosomal subunit
CMT Spahn et al.
SCIENCE (2001)
Kaposi's sarcoma-associated herpesvirus vCyclin open reading frame contains an internal ribosome entry site
L Bieleski et al.
JOURNAL OF VIROLOGY (2001)
Mechanism of ribosome recruitment by hepatitis CIRES RNA
JS Kieft et al.
RNA (2001)
A tertiary structure model of the internal ribosome entry site (IRES) for methionine-independent initiation of translation
Y Kanamori et al.
RNA (2001)
Mechanisms governing expression of the v-FLIP gene of Kaposi's sarcoma-associated herpesvirus
A Grundhoff et al.
JOURNAL OF VIROLOGY (2001)
The human immunodeficiency virus type 1 gag gene encodes an internal ribosome entry site
CB Buck et al.
JOURNAL OF VIROLOGY (2001)
Rous sarcoma virus translation revisited:: Characterization of an internal ribosome entry segment in the 5′ leader of the genomic RNA
C Deffaud et al.
JOURNAL OF VIROLOGY (2000)
Analysis of the complete genome sequence of acute bee paralysis virus shows that it belongs to the novel group of insect-infecting RNA viruses
VA Govan et al.
VIROLOGY (2000)
A potential RNA drug target in the hepatitis C virus internal ribosomal entry site
R Klinck et al.
RNA (2000)
Interaction of the eIF4G initiation factor with the aphthovirus IRES is essential for internal translation initiation in vivo
SL De Quinto et al.
RNA (2000)
Initiation of protein synthesis from the A site of the ribosome
JE Wilson et al.
CELL (2000)
Naturally occurring dicistronic cricket paralysis virus RNA is regulated by two internal ribosome entry sites
JE Wilson et al.
MOLECULAR AND CELLULAR BIOLOGY (2000)
Three-dimensional cryo-electron microscopy localization of EF2 in the Saccharomyces cerevisiae 80S ribosome at 17.5 Å resolution
MG Gomez-Lorenzo et al.
EMBO JOURNAL (2000)
分享论文
