4.0 Article

Updated angiosperm family tree for analyzing phylogenetic diversity and community structure

期刊

ACTA BOTANICA BRASILICA
卷 31, 期 2, 页码 191-198

出版社

SOC BOTANICA BRASIL
DOI: 10.1590/0102-33062016abb0306

关键词

angiosperm diversification; APG IV; community tree calibration; megatrees; phylogenetic topology

资金

  1. CNPq productivity fellowship [301913/2012-9]
  2. Floresta-Escola project (Fundacao Arthur Bernardes) [8279, 47747/15]

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The computation of phylogenetic diversity and phylogenetic community structure demands an accurately calibrated, high-resolution phylogeny, which reflects current knowledge regarding diversification within the group of interest. Herein we present the angiosperm phylogeny R20160415. new, which is based on the topology proposed by the Angiosperm Phylogeny Group IV, a recently released compilation of angiosperm diversification. R20160415. new is calibratable by different sets of recently published estimates of mean node ages. Its application for the computation of phylogenetic diversity and/or phylogenetic community structure is straightforward and ensures the inclusion of up-to-date information in user specific applications, as long as users are familiar with the pitfalls of such handmade supertrees.

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