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Raz Avni et al.
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Burcu Alptekin et al.
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NONCODE 2016: an informative and valuable data source of long non-coding RNAs
Yi Zhao et al.
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Unique features of long non-coding RNA biogenesis and function
Jeffrey J. Quinn et al.
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Bala A. Akpinar et al.
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CURRENT OPINION IN PLANT BIOLOGY (2015)
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Plant miRNAs: biogenesis, organization and origins
Hikmet Budak et al.
FUNCTIONAL & INTEGRATIVE GENOMICS (2015)
Harnessing NGS and Big Data Optimally: Comparison of miRNA Prediction from Assembled versus Non-assembled Sequencing Data-The Case of the Grass Aegilops tauschii Complex Genome
Hikmet Budak et al.
OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2015)
Genome-wide screening for novel, drought stress-responsive long non-coding RNAs in drought-stressed leaf transcriptome of drought-tolerant and -susceptible banana (Musa spp) cultivars using Illumina high-throughput sequencing
M. Muthusamy et al.
PLANT BIOTECHNOLOGY REPORTS (2015)
Stress responsive miRNAs and isomiRs in cereals
Hikmet Budak et al.
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Hikmet Budak et al.
FRONTIERS IN PLANT SCIENCE (2015)
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Yujie Fang et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2015)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
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Where long noncoding RNAs meet DNA methylation
Fan Lai et al.
CELL RESEARCH (2014)
New wheat microRNA using whole-genome sequence
Kuaybe Yucebilgili Kurtoglu et al.
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Identification and characterization of a subset of microRNAs in wheat (Triticum aestivum L.)
Chun Su et al.
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miRBase: annotating high confidence microRNAs using deep sequencing data
Ana Kozomara et al.
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Ancient hybridizations among the ancestral genomes of bread wheat
Thomas Marcussen et al.
SCIENCE (2014)
A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome
Klaus F. X. Mayer et al.
SCIENCE (2014)
Proline Mechanisms of Stress Survival
Xinwen Liang et al.
ANTIOXIDANTS & REDOX SIGNALING (2013)
Thiamine modulates metabolism of the phenylpropanoid pathway leading to enhanced resistance to Plasmopara viticola in grapevine
Hatem Boubakri et al.
BMC PLANT BIOLOGY (2013)
MIPS PlantsDB: a database framework for comparative plant genome research
Thomas Nussbaumer et al.
NUCLEIC ACIDS RESEARCH (2013)
WebAUGUSTUS-a web service for training AUGUSTUS and predicting genes in eukaryotes
Katharina J. Hoff et al.
NUCLEIC ACIDS RESEARCH (2013)
Utilizing sequence intrinsic composition to classify protein-coding and long non-coding transcripts
Liang Sun et al.
NUCLEIC ACIDS RESEARCH (2013)
Genome-wide annotation of genes and noncoding RNAs of foxtail millet in response to simulated drought stress by deep sequencing
Xin Qi et al.
PLANT MOLECULAR BIOLOGY (2013)
Genomics Approaches for Crop Improvement against Abiotic Stress
Bala Ani Akpinar et al.
SCIENTIFIC WORLD JOURNAL (2013)
Drought, salt, and temperature stress-induced metabolic rearrangements and regulatory networks
Julia Krasensky et al.
JOURNAL OF EXPERIMENTAL BOTANY (2012)
A physical, genetic and functional sequence assembly of the barley genome
Klaus F. X. Mayer et al.
NATURE (2012)
Genome-Wide Analysis Uncovers Regulation of Long Intergenic Noncoding RNAs in Arabidopsis
Jun Liu et al.
PLANT CELL (2012)
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Stuart J. Lucas et al.
PLOS ONE (2012)
Plant Small RNAs: Biogenesis, Mode of Action and Their Roles in Abiotic Stresses
Praveen Guleria et al.
GENOMICS PROTEOMICS & BIOINFORMATICS (2012)
miRBase: integrating microRNA annotation and deep-sequencing data
Ana Kozomara et al.
NUCLEIC ACIDS RESEARCH (2011)
psRNATarget: a plant small RNA target analysis server
Xinbin Dai et al.
NUCLEIC ACIDS RESEARCH (2011)
edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
Mark D. Robinson et al.
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Genome sequencing and analysis of the model grass Brachypodium distachyon
John P. Vogel et al.
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BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
A Review of the Primer Approximation Multiplex PCR (PAMP) Technique for Detecting Large Scale Cancer Genomic Lesions
Kedsuda Apichonbancha et al.
Current Bioinformatics (2009)
Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target
Szymon Swiezewski et al.
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The Sorghum bicolor genome and the diversification of grasses
Andrew H. Paterson et al.
NATURE (2009)
Sequencing over 13 000 expressed sequence tags from six subtractive cDNA libraries of wild and modern wheats following slow drought stress
Neslihan Z. Ergen et al.
PLANT CELL AND ENVIRONMENT (2009)
Target mimicry provides a new mechanism for regulation of microRNA activity
Jose Manuel Franco-Zorrilla et al.
NATURE GENETICS (2007)
CPC: assess the protein-coding potential of transcripts using sequence features and support vector machine
Lei Kong et al.
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Loss of At4 function impacts phosphate distribution between the roots and the shoots during phosphate starvation
H Shin et al.
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A profile hidden Markov model for signal peptides generated by HMMER
ZM Zhang et al.
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Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)
Analysis of relative gene expression data using real-time quantitative PCR and the 2-ΔΔCT method
KJ Livak et al.
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