相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Rapid evolution of distinct Helicobacter pylori subpopulations in the Americas
Kaisa Thorell et al.
PLOS GENETICS (2017)
Helicobacter pylori Outer Membrane Protein-Related Pathogenesis
Yuichi Matsuo et al.
TOXINS (2017)
Identification of a Latin American-specific BabA adhesin variant through whole genome sequencing of Helicobacter pylori patient isolates from Nicaragua
Kaisa Thorell et al.
BMC EVOLUTIONARY BIOLOGY (2016)
Interactive tree of life (iTOL) v3: an online tool for the display and annotation of phylogenetic and other trees
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2016)
kSNP3.0: SNP detection and phylogenetic analysis of genomes without genome alignment or reference genome
Shea N. Gardner et al.
BIOINFORMATICS (2015)
Use of Alignment-Free Phylogenetics for Rapid Genome Sequence-Based Typing of Helicobacter pylori Virulence Markers and Antibiotic Susceptibility
Arnoud H. M. van Vliet et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2015)
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data
David Coil et al.
BIOINFORMATICS (2015)
Progressive genomic convergence of two Helicobacter pylori strains during mixed infection of a patient with chronic gastritis
Qizhi Cao et al.
GUT (2015)
Comparative genomic analysis of Helicobacter pylori from Malaysia identifies three distinct lineages suggestive of differential evolution
Narender Kumar et al.
NUCLEIC ACIDS RESEARCH (2015)
Microevolution of Virulence-Related Genes in Helicobacter pylori Familial Infection
Yoshikazu Furuta et al.
PLOS ONE (2015)
The SEED and the Rapid Annotation of microbial genomes using Subsystems Technology (RAST)
Ross Overbeek et al.
NUCLEIC ACIDS RESEARCH (2014)
Population Genetic Structure and Isolation by Distance of Helicobacter pylori in Senegal and Madagascar
Bodo Linz et al.
PLOS ONE (2014)
Helicobacter pylori from Gastric Cancer and Duodenal Ulcer Show Same Phylogeographic Origin in the Andean Region in Colombia
Seiji Shiota et al.
PLOS ONE (2014)
Human and Helicobacter pylori coevolution shapes the risk of gastric disease
Nuri Kodaman et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Admixture in Latin America: Geographic Structure, Phenotypic Diversity and Self-Perception of Ancestry Based on 7,342 Individuals
Andres Ruiz-Linares et al.
PLOS GENETICS (2014)
GET_HOMOLOGUES, a Versatile Software Package for Scalable and Robust Microbial Pangenome Analysis
Bruno Contreras-Moreira et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
Yu Peng et al.
BIOINFORMATICS (2012)
Efficient de novo assembly of large genomes using compressed data structures
Jared T. Simpson et al.
GENOME RESEARCH (2012)
Molecular epidemiology, population genetics, and pathogenic role of Helicobacter pylori
Rumiko Suzuki et al.
INFECTION GENETICS AND EVOLUTION (2012)
Next-Generation Sequencing and De Novo Assembly, Genome Organization, and Comparative Genomic Analyses of the Genomes of Two Helicobacter pylori Isolates from Duodenal Ulcer Patients in India
Narender Kumar et al.
JOURNAL OF BACTERIOLOGY (2012)
The gastric precancerous cascade
Pelayo Correa et al.
JOURNAL OF DIGESTIVE DISEASES (2012)
Gegenees: Fragmented Alignment of Multiple Genomes for Determining Phylogenomic Distances and Genetic Signatures Unique for Specified Target Groups
Joakim Agren et al.
PLOS ONE (2012)
Scaffolding pre-assembled contigs using SSPACE
Marten Boetzer et al.
BIOINFORMATICS (2011)
Phylogeographic origin of Helicobacter pylori is a determinant of gastric cancer risk
Thibaut de Sablet et al.
GUT (2011)
Attenuated CagA Oncoprotein in Helicobacter pylori from Amerindians in Peruvian Amazon
Masato Suzuki et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
Helicobacter pylori Genotyping from American Indigenous Groups Shows Novel Amerindian vacA and cagA Alleles and Asian, African and European Admixture
Margarita Camorlinga-Ponce et al.
PLOS ONE (2011)
CagA C-terminal variations in Helicobacter pylori strains from Colombian patients with gastric precancerous lesions
L. A. Sicinschi et al.
CLINICAL MICROBIOLOGY AND INFECTION (2010)
Helicobacter pylori from Peruvian Amerindians: Traces of Human Migrations in Strains from Remote Amazon, and Genome Sequence of an Amerind Strain
Dangeruta Kersulyte et al.
PLOS ONE (2010)
Helicobacter pylori: a poor man's gut pathogen?
Mohammed Mahdy Khalifa et al.
GUT PATHOGENS (2010)
A tale of two toxins: Helicobacter pylori CagA and VacA modulate host pathways that impact disease
Kathleen R. Jones et al.
FRONTIERS IN MICROBIOLOGY (2010)
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data
P. Librado et al.
BIOINFORMATICS (2009)
Helicobacter pylori typing as a tool for tracking human migration
Y. Yamaoka
CLINICAL MICROBIOLOGY AND INFECTION (2009)
Human Migrations: The Two Roads Taken
Dennis H. O'Rourke
CURRENT BIOLOGY (2009)
Helicobacter pylori in Health and Disease
Timothy L. Cover et al.
GASTROENTEROLOGY (2009)
The Peopling of the Pacific from a Bacterial Perspective
Yoshan Moodley et al.
SCIENCE (2009)
Host-bacterial interactions in Helicobacter pylori infection
Manuel R. Amieva et al.
GASTROENTEROLOGY (2008)
Cross-species virus transmission and the emergence of new epidemic diseases
Colin R. Parrish et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2008)
Amerindian Helicobacter pylori Strains Go Extinct, as European Strains Expand Their Host Range
Maria G. Dominguez-Bello et al.
PLOS ONE (2008)
Ancestral European roots of Helicobacter pylori in India
S. Manjulata Devi et al.
BMC GENOMICS (2007)
HorB (HP0127) is a gastric epithelial cell adhesin
William J. Snelling et al.
HELICOBACTER (2007)
An African origin for the intimate association between humans and Helicobacter pylori
Bodo Linz et al.
NATURE (2007)
Intrafamilial transmission of Helicobacter pylori among the population of endemic areas in Japan
Yayoi Fujimoto et al.
HELICOBACTER (2007)
Improvement of phylogenies after removing divergent and ambiguously aligned blocks from protein sequence alignments
Gerard Talavera et al.
SYSTEMATIC BIOLOGY (2007)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Epidemiology of Helicobacter pylori infection
GI Perez-Perez et al.
HELICOBACTER (2004)
Traces of human migrations in Helicobacter pylori populations
D Falush et al.
SCIENCE (2003)
Helicobacter pylori in North and South America before Columbus
Y Yamaoka et al.
FEBS LETTERS (2002)