4.8 Article

Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Improved regulatory element prediction based on tissue-specific local epigenomic signatures

Yupeng He et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Article Biochemistry & Molecular Biology

Substantial DNA methylation differences between two major neuronal subtypes in human brain

Alexey Kozlenkov et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Biochemical Research Methods

Parallel single-cell sequencing links transcriptional and epigenetic heterogeneity

Christof Angermueller et al.

NATURE METHODS (2016)

Article Neurosciences

Adult mouse cortical cell taxonomy revealed by single cell transcriptomics

Bosiljka Tasic et al.

NATURE NEUROSCIENCE (2016)

Article Biology

Epigenomic landscapes of retinal rods and cones

Alisa Mo et al.

Article Biochemistry & Molecular Biology

Molecular Identity of Human Outer Radial Glia during Cortical Development

Alex A. Pollen et al.

Article Multidisciplinary Sciences

Human body epigenome maps reveal noncanonical DNA methylation variation

Matthew D. Schultz et al.

NATURE (2015)

Article Biochemical Research Methods

MethylC-seq library preparation for base-resolution whole-genome bisulfite sequencing

Mark A. Urich et al.

NATURE PROTOCOLS (2015)

Article Multidisciplinary Sciences

Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq

Amit Zeisel et al.

SCIENCE (2015)

Article Operations Research & Management Science

Multiobjective evolutionary algorithms to identify highly autocorrelated areas: the case of spatial distribution in financially compromised farms

Carlos R. Garcia-Alonso et al.

ANNALS OF OPERATIONS RESEARCH (2014)

Article Multidisciplinary Sciences

Conservation of trans-acting circuitry during mammalian regulatory evolution

Andrew B. Stergachis et al.

NATURE (2014)

Article Multidisciplinary Sciences

A comparative encyclopedia of DNA elements in the mouse genome

Feng Yue et al.

NATURE (2014)

Article Biochemical Research Methods

Single-cell genome-wide bisulfite sequencing for assessing epigenetic heterogeneity

Sebastien A. Smallwood et al.

NATURE METHODS (2014)

Article Biochemistry & Molecular Biology

Master Transcription Factors and Mediator Establish Super-Enhancers at Key Cell Identity Genes

Warren A. Whyte et al.

Article Biochemical Research Methods

Predicting the molecular complexity of sequencing libraries

Timothy Daley et al.

NATURE METHODS (2013)

Article Biochemistry & Molecular Biology

TFClass: an expandable hierarchical classification of human transcription factors

Edgar Wingender et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Multidisciplinary Sciences

Global Epigenomic Reconfiguration During Mammalian Brain Development

Ryan Lister et al.

SCIENCE (2013)

Article Biochemical Research Methods

Fiji: an open-source platform for biological-image analysis

Johannes Schindelin et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

Bismark: a flexible aligner and methylation caller for Bisulfite-Seq applications

Felix Krueger et al.

BIOINFORMATICS (2011)

Article Biochemical Research Methods

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

Bo Li et al.

BMC BIOINFORMATICS (2011)

Article Multidisciplinary Sciences

Neurogenic radial glia in the outer subventricular zone of human neocortex

David V. Hansen et al.

NATURE (2010)

Article Multidisciplinary Sciences

The Behaviour of 5-Hydroxymethylcytosine in Bisulfite Sequencing

Yun Huang et al.

PLOS ONE (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Review Neurosciences

Neuronal subtype specification in the cerebral cortex

Bradley J. Molyneaux et al.

NATURE REVIEWS NEUROSCIENCE (2007)

Article Multidisciplinary Sciences

Genome-wide atlas of gene expression in the adult mouse brain

Ed S. Lein et al.

NATURE (2007)

Review Neurosciences

The origin and specification of cortical interneurons

Carl P. Wonders et al.

NATURE REVIEWS NEUROSCIENCE (2006)

Article Biochemistry & Molecular Biology

The UCSC Table Browser data retrieval tool

D Karolchik et al.

NUCLEIC ACIDS RESEARCH (2004)