期刊
BIOINFORMATICS
卷 34, 期 4, 页码 708-709出版社
OXFORD UNIV PRESS
DOI: 10.1093/bioinformatics/btx633
关键词
-
类别
资金
- Excellent Youth Natural Science Foundation of Jiangsu Province [SBK2017030026]
- Natural Science Foundation of Jiangsu Province [BK20150681]
- National Natural Science Foundation of China [71704081]
- Fundamental Research Funds for the Central Universities [KYTZ201401, SKYC2017019, KYZ201607, KYZ201510, SKTS2017015]
- Ministry of education of Humanities and Social Science project [14YJC630058]
Motivation: High throughput bisulfite sequencing (BS-seq) is an important technology to generate single-base DNA methylomes in both plants and animals. In order to accelerate the data analysis of BS-seq data, toolkits for visualization are required. Results: ViewBS, an open-source toolkit, can extract and visualize the DNA methylome data easily and with flexibility. By using Tabix, ViewBS can visualize BS-seq for large datasets quickly. ViewBS can generate publication-quality figures, such as meta-plots, heat maps and violin-boxplots, which can help users to answer biological questions. We illustrate its application using BS-seq data from Arabidopsis thaliana.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据