4.6 Article

The ZOON R package for reproducible and shareable species distribution modelling

期刊

METHODS IN ECOLOGY AND EVOLUTION
卷 9, 期 2, 页码 260-268

出版社

WILEY
DOI: 10.1111/2041-210X.12858

关键词

modelling; population ecology; software; species distribution modelling; zoon

类别

资金

  1. Engineering and Physical Sciences Research Council [EP/I017909/1]
  2. EPSRC [EP/I017909/1] Funding Source: UKRI
  3. Engineering and Physical Sciences Research Council [EP/I017909/1] Funding Source: researchfish

向作者/读者索取更多资源

1. The rapid growth of species distribution modelling (SDM) as an ecological discipline has resulted in a large and diverse set of methods and software for constructing and evaluating SDMs. The disjointed nature of the current SDM research environment hinders evaluation of new methods, synthesis of current knowledge and the dissemination of new methods to SDM users. 2. The ZOON R package aims to overcome these problems by providing a modular framework for constructing reproducible SDM workflows. zoon modules are interoperable snippets of r code, each carrying a SDM method that zoon combines into a single analysis object. 3. Rather than defining these modules, ZOON draws modules from an open, version-controlled online repository. ZOON makes it easy for SDM researchers to contribute modules to this repository, enabling others to rapidly deploy new methods in their own workflows or to compare alternative methods. 4. Each workflow object created by ZOON is a rerunnable record of the data, code and results of an entire SDM analysis. This can then be easily shared, scrutinised, reproduced and extended by the whole SDM research community. 5. We explain how ZOON works and demonstrate how it can be used to construct a completely reproducible SDM analyses, create and share a new module, and perform a methodological comparison study.

作者

我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。

评论

主要评分

4.6
评分不足

次要评分

新颖性
-
重要性
-
科学严谨性
-
评价这篇论文

推荐

暂无数据
暂无数据