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Jozsef Geml et al.
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Colin Averill et al.
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Aurore Coince et al.
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Leho Tedersoo et al.
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Paul J. McMurdie et al.
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Jeffrey M. Diez et al.
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S. Jarvis et al.
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Johannes Rousk et al.
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Loss in microbial diversity affects nitrogen cycling in soil
Laurent Philippot et al.
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Mohammad Bahram et al.
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Cristina Armas et al.
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Marie L. Davey et al.
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Host plant genus-level diversity is the best predictor of ectomycorrhizal fungal diversity in a Chinese subtropical forest
Cheng Gao et al.
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David S. Hibbett et al.
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K. E. Clemmensen et al.
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Philipp-Andre Schmidt et al.
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Hirokazu Toju et al.
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D. L. Hawksworth
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Thomas Hickler et al.
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Leho Tedersoo et al.
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Regional and local patterns of ectomycorrhizal fungal diversity and community structure along an altitudinal gradient in the Hyrcanian forests of northern Iran
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David Johnson et al.
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Jennifer A. Lau et al.
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Holly M. Bik et al.
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J. R. Deslippe et al.
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Martin Unterseher et al.
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Discovery of novel intermediate forms redefines the fungal tree of life
Meredith D. M. Jones et al.
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Daniel C. Eastwood et al.
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Anna Rosling et al.
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Robert C. Edgar
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Filipa Cox et al.
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R. Henrik Nilsson et al.
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Ari Jumpponen et al.
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Anthony S. Amend et al.
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Courtney L. Meier et al.
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Karin Nadrowski et al.
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Simon Anders et al.
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Leif Kullman et al.
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Matthew E. Smith et al.
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M. Buee et al.
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Marcus Droege et al.
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R Landeweert et al.
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G Kernaghan et al.
ECOGRAPHY (2001)