相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Differential contributions of archaeal ammonia oxidizer ecotypes to nitrification in coastal surface waters
Jason M. Smith et al.
ISME JOURNAL (2014)
The central California Current transition zone: A broad region exhibiting evidence for iron limitation
Dondra V. Biller et al.
PROGRESS IN OCEANOGRAPHY (2014)
Single-Cell Genomics Reveals Hundreds of Coexisting Subpopulations in Wild Prochlorococcus
Nadav Kashtan et al.
SCIENCE (2014)
Phylogenetic diversity of nonmarine picocyanobacteria
Cristiana Callieri et al.
FEMS MICROBIOLOGY ECOLOGY (2013)
Ecology of uncultured Prochlorococcus clades revealed through single-cell genomics and biogeographic analysis
Rex R. Malmstrom et al.
ISME JOURNAL (2013)
Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean
Elke Allers et al.
ISME JOURNAL (2013)
High-resolution SAR11 ecotype dynamics at the Bermuda Atlantic Time-series Study site by phylogenetic placement of pyrosequences
Kevin L. Vergin et al.
ISME JOURNAL (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
Surprisingly extensive mixed phylogenetic and ecological signals among bacterial Operational Taxonomic Units
Alexander F. Koeppel et al.
NUCLEIC ACIDS RESEARCH (2013)
Role of a Microcin-C-like biosynthetic gene cluster in allelopathic interactions in marine Synechococcus
Javier Paz-Yepes et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Present and future global distributions of the marine Cyanobacteria Prochlorococcus and Synechococcus
Pedro Flombaum et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Measurements of nitrite production in and around the primary nitrite maximum in the central California Current
A. E. Santoro et al.
BIOGEOSCIENCES (2013)
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
Elmar Pruesse et al.
BIOINFORMATICS (2012)
Phosphate transporters in marine phytoplankton and their viruses: cross-domain commonalities in viral-host gene exchanges
Adam Monier et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Multi-locus sequence analysis, taxonomic resolution and biogeography of marine Synechococcus
Sophie Mazard et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Novel lineages of Prochlorococcus and Synechococcus in the global oceans
Sijun Huang et al.
ISME JOURNAL (2012)
Sharp gradients in phytoplankton community structure across a frontal zone in the California Current Ecosystem
Andrew G. Taylor et al.
JOURNAL OF PLANKTON RESEARCH (2012)
Phycoerythrin evolution and diversification of spectral phenotype in marine Synechococcus and related picocyanobacteria
R. Craig Everroad et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2012)
Morphological, Phylogenetic and Physiological Studies of Pico-Cyanobacteria Isolated from the Halocline of a Saline Meromictic Lake, Lake Suigetsu, Japan
Kaori Ohki et al.
MICROBES AND ENVIRONMENTS (2012)
Diversity and distribution of marine Synechococcus: multiple gene phylogenies for consensus classification and development of qPCR assays for sensitive measurement of clades in the ocean
Nathan A. Ahlgren et al.
FRONTIERS IN MICROBIOLOGY (2012)
A novel clade of Prochlorococcus found in high nutrient low chlorophyll waters in the South and Equatorial Pacific Ocean
Nyree J. West et al.
ISME JOURNAL (2011)
Global distribution patterns of distinct clades of the photosynthetic picoeukaryote Ostreococcus
Elif Demir-Hilton et al.
ISME JOURNAL (2011)
Accelerated Profile HMM Searches
Sean R. Eddy
PLOS COMPUTATIONAL BIOLOGY (2011)
Non-random assembly of bacterioplankton communities in the subtropical North Pacific Ocean
Alexander Eiler et al.
FRONTIERS IN MICROBIOLOGY (2011)
Differential distributions of Synechococcus subgroups across the California current system
Ryan W. Paerl et al.
FRONTIERS IN MICROBIOLOGY (2011)
Prochlorococcus: Advantages and Limits of Minimalism
Frederic Partensky et al.
ANNUAL REVIEW OF MARINE SCIENCE (2010)
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Frederick A. Matsen et al.
BMC BIOINFORMATICS (2010)
Temporal dynamics of Prochlorococcus ecotypes in the Atlantic and Pacific oceans
Rex R. Malmstrom et al.
ISME JOURNAL (2010)
Characterization of Prochlorococcus clades from iron-depleted oceanic regions
Douglas B. Rusch et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Novel lineages of Prochlorococcus thrive within the oxygen minimum zone of the eastern tropical South Pacific
Paris Lavin et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2010)
Introducing mothur: Open-Source, Platform-Independent, Community-Supported Software for Describing and Comparing Microbial Communities
Patrick D. Schloss et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)
Atomic force microscopy reveals microscale networks and possible symbioses among pelagic marine bacteria
Francesca Malfatti et al.
AQUATIC MICROBIAL ECOLOGY (2009)
Phylogenetic diversity of Synechococcus strains isolated from the East China Sea and the East Sea
Dong Han Choi et al.
FEMS MICROBIOLOGY ECOLOGY (2009)
Colorful microdiversity of Synechococcus strains (picocyanobacteria) isolated from the Baltic Sea
Thomas H. A. Haverkamp et al.
ISME JOURNAL (2009)
Temporal variation of Synechococcus clades at a coastal Pacific Ocean monitoring site
Vera Tai et al.
ISME JOURNAL (2009)
Seasonality and vertical structure of microbial communities in an ocean gyre
Alexander H. Treusch et al.
ISME JOURNAL (2009)
Metagenomic potential of microbial assemblages in the surface waters of the central Pacific Ocean tracks variability in oceanic habitat
Ian Hewson et al.
LIMNOLOGY AND OCEANOGRAPHY (2009)
NH4-Digiscan: an in situ and laboratory ammonium analyzer for estuarine, coastal, and shelf waters
J. N. Plant et al.
LIMNOLOGY AND OCEANOGRAPHY-METHODS (2009)
Ecological Genomics of Marine Picocyanobacteria
D. J. Scanlan et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2009)
rrnDB: documenting the number of rRNA and tRNA genes in bacteria and archaea
Zarraz May-Ping Lee et al.
NUCLEIC ACIDS RESEARCH (2009)
Widespread metabolic potential for nitrite and nitrate assimilation among Prochlorococcus ecotypes
Adam C. Martiny et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Patterns and processes in the California Current System
David M. Checkley et al.
PROGRESS IN OCEANOGRAPHY (2009)
jModelTest: Phylogenetic model averaging
David Posada
MOLECULAR BIOLOGY AND EVOLUTION (2008)
Error-correcting barcoded primers for pyrosequencing hundreds of samples in multiplex
Micah Hamady et al.
NATURE METHODS (2008)
Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria
Alexis Dufresne et al.
GENOME BIOLOGY (2008)
Clustal W and clustal X version 2.0
M. A. Larkin et al.
BIOINFORMATICS (2007)
Basin-scale distribution patterns lineages in the Atlantic Ocean
Katrin Zwirglmaier et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
Diversity and evolution of phycobilisomes in marine Synechococcus spp.: a comparative genomics study
Christophe Six et al.
GENOME BIOLOGY (2007)
Influence of light and temperature on Prochlorococcus ecotype distributions in the Atlantic Ocean
Erik R. Zinser et al.
LIMNOLOGY AND OCEANOGRAPHY (2007)
Comparative molecular evolution of newly discovered picocyanobacterial strains reveals a phylogenetically informative variable region of β-phycoerythrin
R. Craig Everroad et al.
JOURNAL OF PHYCOLOGY (2006)
Culture isolation and culture-independent clone libraries reveal new marine Synechococcus ecotypes with distinctive light and N physiologies
Nathan A. Ahlgren et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Genome sequence of Synechococcus CC9311:: Insights into adaptation to a coastal environment
Brian Palenik et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences
Weizhong Li et al.
BIOINFORMATICS (2006)
Biochemical bases of type IV chromatic adaptation in marine Synechococcus spp.
C Everroad et al.
JOURNAL OF BACTERIOLOGY (2006)
Niche partitioning among Prochlorococcus ecotypes along ocean-scale environmental gradients
ZI Johnson et al.
SCIENCE (2006)
Reverse transcription PCR amplification of cyanobacterial symbiont 16S rRNA sequences from single non-photosynthetic eukaryotic marine planktonic host cells
RA Foster et al.
JOURNAL OF PHYCOLOGY (2006)
Community genomics among stratified microbial assemblages in the ocean's interior
EF DeLong et al.
SCIENCE (2006)
At least 1 in 20 16S rRNA sequence records currently held in public repositories is estimated to contain substantial anomalies
KE Ashelford et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
PHYML Online - a web server for fast maximum likelihood-based phylogenetic inference
S Guindon et al.
NUCLEIC ACIDS RESEARCH (2005)
Bellerophon: a program to detect chimeric sequences in multiple sequence alignments
T Huber et al.
BIOINFORMATICS (2004)
Dispersal and phylogenetic diversity of nonmarine picocyanobacteria, inferred from 16S rRNA gene and cpcBA-intergenic spacer sequence analyses
ND Crosbie et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
Clade-specific 16S ribosomal DNA oligonucleotides reveal the predominance of a single marine Synechococcus clade throughout a stratified water column in the Red Sea
NJ Fuller et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
Ecosystem-dependent adaptive radiations of picocyanobacteria inferred from 16S rRNA and ITS-1 sequence analysis
A Ernst et al.
MICROBIOLOGY-SGM (2003)
The California Current system off Monterey, California: physical and biological coupling
CA Collins et al.
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2003)
Resolution of Prochlorococcus and Synechococcus ecotypes by using 16S-23S ribosomal DNA internal transcribed spacer sequences
G Rocap et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2002)
Picophytoplankton in the equatorial Pacific: vertical distributions in the warm pool and in the high nutrient low chlorophyll conditions
J Blanchot et al.
DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS (2001)
A greedy algorithm for aligning DNA sequences
Z Zhang et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2000)
分享论文
