4.6 Article

Xplor-NIH for molecular structure determination from NMR and other data sources

期刊

PROTEIN SCIENCE
卷 27, 期 1, 页码 26-40

出版社

WILEY
DOI: 10.1002/pro.3248

关键词

structure determination; NMR restraints; SAXS; cryo-electron microscopy; optimization; computational toolbox; protein; nucleic acid

资金

  1. National Institutes of Health: CIT
  2. National Institutes of Health: NIDDK
  3. National Institutes of Health: NCI
  4. National Institutes of Health: NHLBI
  5. CENTER FOR INFORMATION TECHNOLOGY [ZIACT000090] Funding Source: NIH RePORTER
  6. NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES [ZIADK029023] Funding Source: NIH RePORTER

向作者/读者索取更多资源

Xplor-NIH is a popular software package for biomolecular structure determination from nuclear magnetic resonance (NMR) and other data sources. Here, some of Xplor-NIH's most useful data-associated energy terms are reviewed, including newer alternative options for using residual dipolar coupling data in structure calculations. Further, we discuss new developments in the implementation of strict symmetry for the calculation of symmetric homo-oligomers, and in the representation of the system as an ensemble of structures to account for motional effects. Finally, the different available force fields are presented, among other Xplor-NIH capabilities.

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