相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Intragenus competition between coccolithoviruses: an insight on how a select few can come to dominate many
Jozef I. Nissimov et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Pluses and minuses of ammonium and nitrate uptake and assimilation by phytoplankton and implications for productivity and community composition, with emphasis on nitrogen-enriched conditions
Patricia M. Glibert et al.
LIMNOLOGY AND OCEANOGRAPHY (2016)
Both phosphorus- and nitrogen limitation constrain viral proliferation in marine phytoplankton
Douwe S. Maat et al.
AQUATIC MICROBIAL ECOLOGY (2016)
Ecogenomics and potential biogeochemical impacts of globally abundant ocean viruses
Simon Roux et al.
NATURE (2016)
Viral infection of the marine alga Emiliania huxleyi triggers lipidome remodeling and induces the production of highly saturated triacylglycerol
Sergey Malitsky et al.
NEW PHYTOLOGIST (2016)
Viral serine palmitoyltransferase induces metabolic switch in sphingolipid biosynthesis and is required for infection of a marine alga
Carmit Ziv et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Phylogenetic diversity and biogeography of the Mamiellophyceae lineage of eukaryotic phytoplankton across the oceans
Adam Monier et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2016)
Virus production in phosphorus-limited Micromonas pusilla stimulated by a supply of naturally low concentrations of different phosphorus sources, far into the lytic cycle
Douwe S. Maat et al.
FEMS MICROBIOLOGY ECOLOGY (2016)
Organic and Inorganic Nitrogen Impact Chlorella variabilis Productivity and Host Quality for Viral Production and Cell Lysis
Yu-Shen Cheng et al.
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY (2015)
DIVERSITY OF NITROGEN ASSIMILATION PATHWAYS AMONG MICROBIAL PHOTOSYNTHETIC EUKARYOTES
Ramon Terrado et al.
JOURNAL OF PHYCOLOGY (2015)
Grazer and viral impacts on microbial growth and mortality in the southern California Current Ecosystem
Alexis L. Pasulka et al.
JOURNAL OF PLANKTON RESEARCH (2015)
Diversity of Viruses Infecting the Green Microalga Ostreococcus lucimarinus
Evelyne Derelle et al.
JOURNAL OF VIROLOGY (2015)
Elevated CO2 and Phosphate Limitation Favor Micromonas pusilla through Stimulated Growth and Reduced Viral Impact
Douwe S. Maat et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Factors affecting virus dynamics and microbial host-virus interactions in marine environments
Kristina D. A. Mojica et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
The elemental composition of virus particles: implications for marine biogeochemical cycles
Luis F. Jover et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Activities at the Universal Protein Resource (UniProt)
Rolf Apweiler et al.
NUCLEIC ACIDS RESEARCH (2014)
Pfam: the protein families database
Robert D. Finn et al.
NUCLEIC ACIDS RESEARCH (2014)
Rewiring Host Lipid Metabolism by Large Viruses Determines the Fate of Emiliania huxleyi, a Bloom-Forming Alga in the Ocean
Shilo Rosenwasser et al.
PLANT CELL (2014)
Sulfur Oxidation Genes in Diverse Deep-Sea Viruses
Karthik Anantharaman et al.
SCIENCE (2014)
Attenuation of virus production at high multiplicities of infection in Aureococcus anophagefferens
Christopher M. Brown et al.
VIROLOGY (2014)
The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): Illuminating the Functional Diversity of Eukaryotic Life in the Oceans through Transcriptome Sequencing
Patrick J. Keeling et al.
PLOS BIOLOGY (2014)
opm: an R package for analysing OmniLog® phenotype microarray data
Lea A. I. Vaas et al.
BIOINFORMATICS (2013)
Phylogenetic conservatism of functional traits in microorganisms
Adam C. Martiny et al.
ISME JOURNAL (2013)
Exploring nucleo-cytoplasmic large DNA viruses in Tara Oceans microbial metagenomes
Pascal Hingamp et al.
ISME JOURNAL (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Processes and patterns of oceanic nutrient limitation
C. M. Moore et al.
NATURE GEOSCIENCE (2013)
Horizontal gene transfer in osmotrophs: playing with public goods
Thomas A. Richards et al.
NATURE REVIEWS MICROBIOLOGY (2013)
Identification and Characterization of a PutAMT1;1 Gene from Puccinellia tenuiflora
Yuanyuan Bu et al.
PLOS ONE (2013)
Putting the N in dinoflagellates
Steve Dagenais-Bellefeuille et al.
FRONTIERS IN MICROBIOLOGY (2013)
Metabolic reprogramming by viruses in the sunlit and dark ocean
Bonnie L. Hurwitz et al.
GENOME BIOLOGY (2013)
Marine Viruses: Truth or Dare
Mya Breitbart
ANNUAL REVIEW OF MARINE SCIENCE, VOL 4 (2012)
Marine Viruses Exploit Their Host's Two-Component Regulatory System in Response to Resource Limitation
Qinglu Zeng et al.
CURRENT BIOLOGY (2012)
Phosphate transporters in marine phytoplankton and their viruses: cross-domain commonalities in viral-host gene exchanges
Adam Monier et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
Phylogenomics of T4 cyanophages: lateral gene transfer in the 'core' and origins of host genes
J. Cesar Ignacio-Espinoza et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
The ecology of viruses that infect eukaryotic algae
Steven M. Short
ENVIRONMENTAL MICROBIOLOGY (2012)
Multiple Horizontal Gene Transfers of Ammonium Transporters/Ammonia Permeases from Prokaryotes to Eukaryotes: Toward a New Functional and Evolutionary Classification
Tami R. McDonald et al.
MOLECULAR BIOLOGY AND EVOLUTION (2012)
OCEAN SCIENCE The power of plankton
Paul Falkowski
NATURE (2012)
ProtTest 3: fast selection of best-fit models of protein evolution
Diego Darriba et al.
BIOINFORMATICS (2011)
Acquisition and maintenance of resistance to viruses in eukaryotic phytoplankton populations
Rozenn Thomas et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Viruses with More Than 1,000 Genes: Mamavirus, a New Acanthamoeba polyphagamimivirus Strain, and Reannotation of Mimivirus Genes
Philippe Colson et al.
Genome Biology and Evolution (2011)
Genome Sequence of Ostreococcus tauri Virus OtV-2 Throws Light on the Role of Picoeukaryote Niche Separation in the Ocean
Karen D. Weynberg et al.
JOURNAL OF VIROLOGY (2011)
Niche of harmful alga Aureococcus anophagefferens revealed through ecogenomics
Christopher J. Gobler et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Phage auxiliary metabolic genes and the redirection of cyanobacterial host carbon metabolism
Luke R. Thompson et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Accelerated Profile HMM Searches
Sean R. Eddy
PLOS COMPUTATIONAL BIOLOGY (2011)
pplacer: linear time maximum-likelihood and Bayesian phylogenetic placement of sequences onto a fixed reference tree
Frederick A. Matsen et al.
BMC BIOINFORMATICS (2010)
Genomic analysis of oceanic cyanobacterial myoviruses compared with T4-like myoviruses from diverse hosts and environments
Matthew B. Sullivan et al.
ENVIRONMENTAL MICROBIOLOGY (2010)
Marine Prasinovirus Genomes Show Low Evolutionary Divergence and Acquisition of Protein Metabolism Genes by Horizontal Gene Transfer
Herve Moreau et al.
JOURNAL OF VIROLOGY (2010)
The Mixed Lineage Nature of Nitrogen Transport and Assimilation in Marine Eukaryotic Phytoplankton: A Case Study of Micromonas
Sarah M. McDonald et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
PLOS ONE (2010)
Molecular Phylogeny and Classification of the Mamiellophyceae class. nov (Chlorophyta) based on Sequence Comparisons of the Nuclear- and Plastid-encoded rRNA Operons
Birger Marin et al.
PROTIST (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
From small hosts come big viruses: the complete genome of a second Ostreococcus tauri virus, OtV-1
Karen D. Weynberg et al.
ENVIRONMENTAL MICROBIOLOGY (2009)
Horizontal gene transfer of an entire metabolic pathway between a eukaryotic alga and its DNA virus
Adam Monier et al.
GENOME RESEARCH (2009)
Photosystem I gene cassettes are present in marine virus genomes
Itai Sharon et al.
NATURE (2009)
Viruses manipulate the marine environment
Forest Rohwer et al.
NATURE (2009)
Global phenotypic characterization of bacteria
Barry R. Bochner
FEMS MICROBIOLOGY REVIEWS (2009)
I-TASSER server for protein 3D structure prediction
Yang Zhang
BMC BIOINFORMATICS (2008)
Efficient phage-mediated pigment biosynthesis in oceanic cyanabacteria
Thorben Dammeyer et al.
CURRENT BIOLOGY (2008)
Functional metagenomic profiling of nine biomes
Elizabeth A. Dinsdale et al.
NATURE (2008)
Life-Cycle and Genome of OtV5, a Large DNA Virus of the Pelagic Marine Unicellular Green Alga Ostreococcus tauri
Evelyne Derelle et al.
PLOS ONE (2008)
Marine mimivirus relatives are probably large algal viruses
Adam Monier et al.
VIROLOGY JOURNAL (2008)
High-Throughput Phenotypic Characterization of Pseudomonas aeruginosa Membrane Transport Genes
Daniel A. Johnson et al.
PLOS GENETICS (2008)
Taxonomic distribution of large DNA viruses in the sea
Adam Monier et al.
GENOME BIOLOGY (2008)
The role of functional traits and trade-offs in structuring phytoplankton communities: scaling from cellular to ecosystem level
Elena Litchman et al.
ECOLOGY LETTERS (2007)
Patterns and implications of gene gain and loss in the evolution of Prochlorococcus
Gregory C. Kettler et al.
PLOS GENETICS (2007)
Marine viruses - major players in the global ecosystem
Curtis A. Suttle
NATURE REVIEWS MICROBIOLOGY (2007)
The Amt/Mep/Rh family of ammonium transport proteins
Susana L. A. Andrade et al.
MOLECULAR MEMBRANE BIOLOGY (2007)
The effect of host Chlorella NC64A carbon : phosphorus ratio on the production of Paramecium bursaria Chlorella Virus-1
Jessica L. Clasen et al.
FRESHWATER BIOLOGY (2007)
An unusual twin-His arrangement in the pore of ammonia channels is essential for substrate conductance
Arnaud Javelle et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Additive contribution of AMT1;1 and AMT1;3 to high-affinity ammonium uptake across the plasma membrane of nitrogen-deficient Arabidopsis roots
Dominique Loque et al.
PLANT JOURNAL (2006)
Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features
Evelyne Derelle et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Tools for integrated sequence-structure analysis with UCSF Chimera
Elaine C. Meng et al.
BMC BIOINFORMATICS (2006)
An ecological and evolutionary context for integrated nitrogen metabolism and related signaling pathways in marine diatoms
Andrew E. Allen et al.
CURRENT OPINION IN PLANT BIOLOGY (2006)
Crystal structure of the archaeal ammonium transporter Amt-1 from Archaeoglobus fulgidus
SLA Andrade et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)
Marine microorganisms and global nutrient cycles
KR Arrigo
NATURE (2005)
Cloning and functional characterization of ammonium transporters from the marine diatom Cylindrotheca fusiformis (Bacillariophyceae)
M Hildebrand
JOURNAL OF PHYCOLOGY (2005)
Optimization of procedures for counting viruses by flow cytometry
CPD Brussaard
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Viral control of phytoplankton populations - a review
CPD Brussaard
JOURNAL OF EUKARYOTIC MICROBIOLOGY (2004)
Mechanism of ammonia transport by Amt/MEP/Rh:: Structure of AmtB at 1.3.5 Å
S Khademi et al.
SCIENCE (2004)
The mechanism of ammonia transport based on the crystal structure of AmtB of Escherichia coli
L Zheng et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2004)
Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic component
AZ Worden et al.
LIMNOLOGY AND OCEANOGRAPHY (2004)
AtDUR3 encodes a new type of high-affinity urea/H+ symporter in Arabidopsis
LH Liu et al.
PLANT CELL (2003)
The TIGRFAMs database of protein families
DH Haft et al.
NUCLEIC ACIDS RESEARCH (2003)
Consumer versus resource control of species diversity and ecosystem functioning
B Worm et al.
NATURE (2002)
Common origin of four diverse families of large eukaryotic DNA viruses
LM Iyer et al.
JOURNAL OF VIROLOGY (2001)
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
A Krogh et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
The molecular physiology of ammonium uptake and retrieval
N von Wirén et al.
CURRENT OPINION IN PLANT BIOLOGY (2000)
分享论文
