4.8 Article

Alternative polyadenylation is involved in auxin-based plant growth and development

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Plant Sciences

Seed Dormancy in Arabidopsis Is Controlled by Alternative Polyadenylation of DOG1

Malgorzata Cyrek et al.

PLANT PHYSIOLOGY (2016)

Article Plant Sciences

PlantAPA: A Portal for Visualization and Analysis of Alternative Polyadenylation in Plants

Xiaohui Wu et al.

FRONTIERS IN PLANT SCIENCE (2016)

Article Multidisciplinary Sciences

A Genome-wide Study of Non-3UTR Polyadenylation Sites in Arabidopsis thaliana

Cheng Guo et al.

SCIENTIFIC REPORTS (2016)

Article Biochemistry & Molecular Biology

The MEME Suite

Timothy L. Bailey et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Biochemistry & Molecular Biology

The identification and characterization of specific ARF-Aux/IAA regulatory modules in plant growth and development

Naden T. Krogan et al.

PLANT SIGNALING & BEHAVIOR (2015)

Review Biochemistry & Molecular Biology

CPSF30 at the Interface of Alternative Polyadenylation and Cellular Signaling in Plants

Manohar Chakrabarti et al.

BIOMOLECULES (2015)

Article Biotechnology & Applied Microbiology

Moderated estimation of fold change and dispersion for RNA-seq data with DESeq2

Michael I. Love et al.

GENOME BIOLOGY (2014)

Article Biotechnology & Applied Microbiology

Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants

Arthur G. Hunt et al.

BMC GENOMICS (2012)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Biochemistry & Molecular Biology

Ensembl 2012

Paul Flicek et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Biotechnology & Applied Microbiology

clusterProfiler: an R Package for Comparing Biological Themes Among Gene Clusters

Guangchuang Yu et al.

OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY (2012)

Article Biochemical Research Methods

MEME-ChIP: motif analysis of large DNA datasets

Philip Machanick et al.

BIOINFORMATICS (2011)

Review Plant Sciences

Auxin conjugates: their role for plant development and in the evolution of land plants

Jutta Ludwig-Mueller

JOURNAL OF EXPERIMENTAL BOTANY (2011)

Article Biochemistry & Molecular Biology

KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases

Chen Xie et al.

NUCLEIC ACIDS RESEARCH (2011)

Article Multidisciplinary Sciences

Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation

Xiaohui Wu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Review Cell Biology

Alternative polyadenylation and gene expression regulation in plants

Denghui Xing et al.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2011)

Article Biochemistry & Molecular Biology

Molecular mechanisms of eukaryotic pre-mRNA 3' end processing regulation

Stefania Millevoi et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Biochemistry & Molecular Biology

agriGO: a GO analysis toolkit for the agricultural community

Zhou Du et al.

NUCLEIC ACIDS RESEARCH (2010)

Article Multidisciplinary Sciences

Arabidopsis PIS1 encodes the ABCG37 transporter of auxinic compounds including the auxin precursor indole-3-butyric acid

Kamil Ruzicka et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biotechnology & Applied Microbiology

Differential expression analysis for sequence count data

Simon Anders et al.

GENOME BIOLOGY (2010)

Review Biochemistry & Molecular Biology

Auxin: A Trigger for Change in Plant Development

Steffen Vanneste et al.

Article Biochemistry & Molecular Biology

MEME SUITE: tools for motif discovery and searching

Timothy L. Bailey et al.

NUCLEIC ACIDS RESEARCH (2009)

Review Biochemistry & Molecular Biology

Hormone interactions during lateral root formation

Hidehiro Fukaki et al.

PLANT MOLECULAR BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Comprehensive transcriptome analysis of auxin responses in Arabidopsis

Ivan A. Paponov et al.

MOLECULAR PLANT (2008)

Article Plant Sciences

PIN polar targeting

Elena Feraru et al.

PLANT PHYSIOLOGY (2008)

Article Multidisciplinary Sciences

Auxin transport is sufficient to generate a maximum and gradient guiding root growth

Veronica A. Grieneisen et al.

NATURE (2007)

Article Biochemistry & Molecular Biology

The Arabidopsis Aux/IAA protein family has diversified in degradation and auxin responsiveness

KA Dreher et al.

PLANT CELL (2006)

Article Multidisciplinary Sciences

The F-box protein TIR1 is an auxin receptor

N Dharmasiri et al.

NATURE (2005)

Article Multidisciplinary Sciences

The Arabidopsis F-box protein TIR1 is an auxin receptor

S Kepinski et al.

NATURE (2005)

Article Biochemistry & Molecular Biology

Aux/IAA proteins contain a potent transcriptional repression domain

SB Tiwari et al.

PLANT CELL (2004)

Review Cell Biology

MRNA export: an assembly line from genes to nuclear pores

P Vinciguerra et al.

CURRENT OPINION IN CELL BIOLOGY (2004)

Review Biochemistry & Molecular Biology

Evolutionary patterns in auxin action

TJ Cooke et al.

PLANT MOLECULAR BIOLOGY (2002)

Article Biochemistry & Molecular Biology

AUX/IAA proteins are active repressors, and their stability and activity are modulated by auxin

SB Tiwari et al.

PLANT CELL (2001)

Article Multidisciplinary Sciences

Auxin regulates SCFTIR1-dependent degradation of AUX/IAA proteins

WM Gray et al.

NATURE (2001)

Review Plant Sciences

Roles and activities of Aux/IAA proteins in Arabidopsis

JW Reed

TRENDS IN PLANT SCIENCE (2001)

Review Biochemistry & Molecular Biology

Omiga™:: A PC-based sequence analysis tool

JA Kramer

MOLECULAR BIOTECHNOLOGY (2001)

Article Biochemistry & Molecular Biology

Auxin transport promotes Arabidopsis lateral root initiation

I Casimiro et al.

PLANT CELL (2001)