4.8 Article

ECOdrug: a database connecting drugs and conservation of their targets across species

期刊

NUCLEIC ACIDS RESEARCH
卷 46, 期 D1, 页码 D930-D936

出版社

OXFORD UNIV PRESS
DOI: 10.1093/nar/gkx1024

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资金

  1. Innovative Medicines Initiative Joint Undertaking under Intelligent Assessment of Pharmaceuticals [115735]
  2. European Union's Seventh Framework Programme [FP7]
  3. European Federation of Pharmaceutical Industries and Associations companies
  4. FORMAS Research Council
  5. Wallenberg Foundation
  6. FRAM centre for future and chemical risk assessment and management strategies at University of Gothenburg
  7. AstraZeneca
  8. NC3Rs [102519]
  9. Virtual Fish EcoToxicology Laboratory
  10. AstraZeneca Global SHE
  11. Innovate UK [102519] Funding Source: UKRI
  12. NERC [NE/K004263/1, NE/F007787/1] Funding Source: UKRI
  13. Natural Environment Research Council [NE/F007787/1, NE/K004263/1] Funding Source: researchfish

向作者/读者索取更多资源

Pharmaceuticals are designed to interact with specific molecular targets in humans and these targets generally have orthologs in other species. This provides opportunities for the drug discovery community to use alternative model species for drug development. It also means, however, there is potential for mode of action related effects in non-target wildlife species as many pharmaceuticals reach the environment through patient use and manufacturing wastes. Acquiring insight in drug target ortholog predictions across species and taxonomic groups has proven difficult because of the lack of an optimal strategy and because necessary information is spread across multiple and diverse sources and platforms. We introduce a new research platform tool, ECOdrug, that reliably connects drugs to their protein targets across divergent species. It harmonizes ortholog predictions from multiple sources via a simple user interface underpinning critical applications for a wide range of studies in pharmacology, ecotoxicology and comparative evolutionary biology. ECOdrug can be used to identify species with drug targets and identify drugs that interact with those targets. As such, it can be applied to support intelligent targeted drug safety testing by ensuring appropriate and relevant species are selected in ecological risk assessments. ECOdrug is freely accessible and available at: http://www.ecodrug.org.

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