相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Histone methyltransferase TXR1 is required for both H3 and H3.3 lysine 27 methylation in the well-known ciliated protist Tetrahymena thermophila
Xiaolu Zhao et al.
SCIENCE CHINA-LIFE SCIENCES (2017)
Widespread adenine N6-methylation of active genes in fungi
Stephen J. Mondo et al.
NATURE GENETICS (2017)
Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification
Lakshminarayan M. Iyer et al.
BIOESSAYS (2016)
DNA methylation on N6-adenine in mammalian embryonic stem cellse
Tao P. Wu et al.
NATURE (2016)
Enzymatic and chemical mapping of nucleosome distribution in purified micro- and macronuclei of the ciliated model organism, Tetrahymena thermophila
Xiao Chen et al.
SCIENCE CHINA-LIFE SCIENCES (2016)
Characterization of eukaryotic DNA N6-methyladenine by a highly sensitive restriction enzyme-assisted sequencing
Guan-Zheng Luo et al.
NATURE COMMUNICATIONS (2016)
Abundant DNA 6mA methylation during early embryogenesis of zebrafish and pig
Jianzhao Liu et al.
NATURE COMMUNICATIONS (2016)
DNA Methylation on N6-Adenine in C-elegans
Eric Lieberman Greer et al.
CELL (2015)
N6-Methyladenine DNA Modification in Drosophila
Guoqiang Zhang et al.
CELL (2015)
N6-Methyldeoxyadenosine Marks Active Transcription Start Sites in Chlamydomonas
Ye Fu et al.
CELL (2015)
DNA-guided establishment of nucleosome patterns within coding regions of a eukaryotic genome
Leslie Y. Beh et al.
GENOME RESEARCH (2015)
Small-RNA-Mediated Genome-wide trans-Recognition Network in Tetrahymena DNA Elimination
Tomoko Noto et al.
MOLECULAR CELL (2015)
Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes
Jason T. Huff et al.
CELL (2014)
Quantifying the role of steric constraints in nucleosome positioning
H. Tomas Rube et al.
NUCLEIC ACIDS RESEARCH (2014)
deepTools: a flexible platform for exploring deep-sequencing data
Fidel Ramirez et al.
NUCLEIC ACIDS RESEARCH (2014)
Identification of RNA polymerase III-transcribed genes in eukaryotic genomes
Giorgio Dieci et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2013)
Using GBrowse 2.0 to visualize and share next-generation sequence data
Lincoln D. Stein
BRIEFINGS IN BIOINFORMATICS (2013)
SWR-C and INO80 Chromatin Remodelers Recognize Nucleosome-free Regions Near+1 Nucleosomes
Kuangyu Yen et al.
CELL (2013)
Impaired replication elongation in Tetrahymena mutants deficient in histone H3 Lys 27 monomethylation
Shan Gao et al.
GENES & DEVELOPMENT (2013)
DNA methylation: roles in mammalian development
Zachary D. Smith et al.
NATURE REVIEWS GENETICS (2013)
Precise deposition of histone H2A.Z in chromatin for genome expression and maintenance
Pierre Billon et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Transcriptome Analysis of the Model Protozoan, Tetrahymena thermophila, Using Deep RNA Sequencing
Jie Xiong et al.
PLOS ONE (2012)
Determinants of nucleosome organization in primary human cells
Anton Valouev et al.
NATURE (2011)
Structure of DNMT1-DNA Complex Reveals a Role for Autoinhibition in Maintenance DNA Methylation
Jikui Song et al.
SCIENCE (2011)
Genomic Distribution and Inter-Sample Variation of Non-CpG Methylation across Human Cell Types
Michael J. Ziller et al.
PLOS GENETICS (2011)
Transcriptional Activity Affects the H3K4me3 Level and Distribution in the Coding Region
Cindy Yen Okitsu et al.
MOLECULAR AND CELLULAR BIOLOGY (2010)
A clustering approach for identification of enriched domains from histone modification ChIP-Seq data
Chongzhi Zang et al.
BIOINFORMATICS (2009)
Circos: An information aesthetic for comparative genomics
Martin Krzywinski et al.
GENOME RESEARCH (2009)
KAAS: an automatic genome annotation and pathway reconstruction server
Yuki Moriya et al.
NUCLEIC ACIDS RESEARCH (2007)
Rules and regulation in the primary structure of chromatin
Oliver J. Rando et al.
CURRENT OPINION IN CELL BIOLOGY (2007)
N6-methyladenine: the other methylated base of DNA
D Ratel et al.
BIOESSAYS (2006)
Macronuclear genome sequence of the ciliate Tetrahymena thermophila, a model eukaryote
Jonathan A. Eisen et al.
PLOS BIOLOGY (2006)
Variant histone H2A.Z is globally localized to the promoters of inactive yeast genes and regulates nucleosome positioning
B Guillemette et al.
PLOS BIOLOGY (2005)
WebLogo: A sequence logo generator
GE Crooks et al.
GENOME RESEARCH (2004)
Methylation of adenine in the nuclear DNA of Tetrahymena is internucleosomal and independent of histone H1
KM Karrer et al.
NUCLEIC ACIDS RESEARCH (2002)
Nongenic, bidirectional transcription precedes and may promote developmental DNA deletion in Tetrahymena thermophila
DL Chalker et al.
GENES & DEVELOPMENT (2001)
ATP-dependent chromatin remodeling activities
K Havas et al.
CELLULAR AND MOLECULAR LIFE SCIENCES (2001)
Non-CpG methylation is prevalent in embryonic stem cells and may be mediated by DNA methyltransferase 3a
BH Ramsahoye et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
SWI-SNF-mediated nucleosome remodeling: Role of histone octamer mobility in the persistence of the remodeled state
M Jaskelioff et al.
MOLECULAR AND CELLULAR BIOLOGY (2000)