相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Solution structure of the 5′-terminal hairpin of the 7SK small nuclear RNA
Sarah Bourbigot et al.
RNA (2016)
Intermolecular recognition of the non-coding RNA 7SK and HEXIM protein in perspective
Denise Martinez-Zapien et al.
BIOCHIMIE (2015)
Structural insight into the mechanism of stabilization of the 7SK small nuclear RNA by LARP7
Emiko Uchikawa et al.
NUCLEIC ACIDS RESEARCH (2015)
Distinct Conformational Transition Patterns of Noncoding 7SK snRNA and HIV TAR RNAs upon Tat Binding
Jia Lu et al.
BIOCHEMISTRY (2014)
Vfold: A Web Server for RNA Structure and Folding Thermodynamics Prediction
Xiaojun Xu et al.
PLOS ONE (2014)
Building a stable RNA U-turn with a protonated cytidine
Sina R. Gottstein-Schmidtke et al.
RNA (2014)
RNA elements directing in vivo assembly of the 7SK/MePCE/Larp7 transcriptional regulatory snRNP
Lisa Muniz et al.
NUCLEIC ACIDS RESEARCH (2013)
Automated 3D structure composition for large RNAs
Mariusz Popenda et al.
NUCLEIC ACIDS RESEARCH (2012)
7SK snRNA: a noncoding RNA that plays a major role in regulating eukaryotic transcription
B. Matija Peterlin et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2012)
The Bin3 RNA methyltransferase targets 7SK RNA to control transcription and translation
Michael S. Cosgrove et al.
WILEY INTERDISCIPLINARY REVIEWS-RNA (2012)
Protonation of Base Pairs in RNA: Context Analysis and Quantum Chemical Investigations of Their Geometries and Stabilities
Mohit Chawla et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2011)
Essential structural requirements for specific recognition of HIV TAR RNA by peptide mimetics of Tat protein
Amy Davidson et al.
NUCLEIC ACIDS RESEARCH (2011)
CURVES plus web server for analyzing and visualizing the helical, backbone and groove parameters of nucleic acid structures
Christophe Blanchet et al.
NUCLEIC ACIDS RESEARCH (2011)
A Flexible Bipartite Coiled Coil Structure Is Required for the Interaction of Hexim1 with the P-TEFb Subunit Cyclin T1
Andre Schoenichen et al.
BIOCHEMISTRY (2010)
Assemble: an interactive graphical tool to analyze and build RNA architectures at the 2D and 3D levels
Fabrice Jossinet et al.
BIOINFORMATICS (2010)
Specificity of Hexim1 and Hexim2 Complex Formation with Cyclin T1/T2, Importin α and 7SK snRNA
Nadine Czudnochowski et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Solving novel RNA structures using only secondary structural fragments
Michael P. Robertson et al.
METHODS (2010)
A capping-independent function of MePCE in stabilizing 7SK snRNA and facilitating the assembly of 7SK snRNP
Yuhua Xue et al.
NUCLEIC ACIDS RESEARCH (2010)
HEXIM1 targets a repeated GAUC motif in the riboregulator of transcription 7SK and promotes base pair rearrangements
Isabelle Lebars et al.
NUCLEIC ACIDS RESEARCH (2010)
The Mechanism of Release of P-TEFb and HEXIM1 from the 7SK snRNP by Viral and Cellular Activators Includes a Conformational Change in 7SK
Brian J. Krueger et al.
PLOS ONE (2010)
Controlling Cellular P-TEFb Activity by the HIV-1 Transcriptional Transactivator Tat
Lisa Muniz et al.
PLOS PATHOGENS (2010)
U30 of 7SK RNA Forms a Specific Photo-cross-link with Hexim1 in the Context of Both a Minimal RNA-binding site and a Fully Reconstituted 7SK/Hexim1/P-TEFb Ribonucleoprotein Complex
Francois Belanger et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Evolution of 7SK RNA and Its Protein Partners in Metazoa
Manja Marz et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
Conformational analysis of nucleic acids revisited: Curves
R. Lavery et al.
NUCLEIC ACIDS RESEARCH (2009)
7SK RNA, a non-coding RNA regulating P-TEFb, a general transcription factor
Gaelle Diribarne et al.
RNA BIOLOGY (2009)
Non-coding RNAs regulating the transcriptional machinery
Charlotte Barrandon et al.
BIOLOGY OF THE CELL (2008)
Invertebrate 7SK snRNAs
Andreas R. Gruber et al.
JOURNAL OF MOLECULAR EVOLUTION (2008)
Arthropod 7SK RNA
Andreas R. Gruber et al.
MOLECULAR BIOLOGY AND EVOLUTION (2008)
A la-related protein modulates 7SK snRNP integrity to suppress P-TEFb-dependent transcriptional elongation and tumorigenesis
Nanhai He et al.
MOLECULAR CELL (2008)
The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data
Marc Parisien et al.
NATURE (2008)
Structural insights into the Cyclin T1-Tat-TAR RNA transcription activation complex from EIAV
Kanchan Anand et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2008)
LARP7 is a stable component of the 7SK snRNP while P-TEFb, HEXIM1 and hnRNP A1 are reversibly associated
Brian J. Krueger et al.
NUCLEIC ACIDS RESEARCH (2008)
Structure of the Cyclin T binding domain of Hexim 1 and molecular basis for its recognition of P-TEFb
Sonja A. Dames et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)
Systematic analysis of the protein interaction network for the human transcription machinery reveals the identity of the 7SK capping enzyme
Celia Jeronimo et al.
MOLECULAR CELL (2007)
Refinenement of the AMBER force field for nucleic acids:: Improving the description of α/γ conformers
Alberto Perez et al.
BIOPHYSICAL JOURNAL (2007)
Calculation of pKas in RNA:: On the structural origins and functional roles of protonated nucleotides
Christopher L. Tang et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
Manipulation of P-TEFb control machinery by HIV: recruitment of P-TEFb from the large form by Tat and binding of HEXIM1 to TAR
Stanley C. Sedore et al.
NUCLEIC ACIDS RESEARCH (2007)
Regulation of polymerase II transcription by 7SK snRNA: Two distinct RNA elements direct P-TEFb and HEXIM1 binding
S Egloff et al.
MOLECULAR AND CELLULAR BIOLOGY (2006)
Identification of a cyclin T-binding domain in Hexim1 and biochemical analysis of its binding competition with HIV-1 Tat
A Schulte et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Binding of the 7SK snRNA turns the HEXIM1 protein into a P-TEFb (CDK9/cyclin T) inhibitor
AA Michels et al.
EMBO JOURNAL (2004)
A human immunodeficiency virus type 1 tat-like arginine-rich RNA-binding domain is essential for HEXIM1 to inhibit RNA polymerase II transcription through 7SK snRNA-Mediated inactivation of P-TEFb
JHN Yik et al.
MOLECULAR AND CELLULAR BIOLOGY (2004)
MAQ1 and 7SK RNA interact with CDK9/cyclin T complexes in a transcription-dependent manner
AA Michels et al.
MOLECULAR AND CELLULAR BIOLOGY (2003)
The 7SK small nuclear RNA inhibits the CDK9/cyclin T1 kinase to control transcription
ZY Yang et al.
NATURE (2001)
7SK small nuclear RNA binds to and inhibits the activity of CDK9/cyclin T complexes
VT Nguyen et al.
NATURE (2001)
Geometric nomenclature and classification of RNA base pairs
NB Leontis et al.
RNA (2001)
Adenine protonation in domain B of the hairpin ribozyme
S Ravindranathan et al.
BIOCHEMISTRY (2000)
The crystal structure of UUCG tetraloop
E Ennifar et al.
JOURNAL OF MOLECULAR BIOLOGY (2000)
The G•U wobble base pair -: A fundamental building block of RNA structure crucial to RNA function in diverse biological systems
G Varani et al.
EMBO REPORTS (2000)
On the wobble GoU and related pairs
B Masquida et al.
RNA (2000)