4.7 Review

Limb development: a paradigm of gene regulation

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Progressive Loss of Function in a Limb Enhancer during Snake Evolution

Evgeny Z. Kvon et al.

Article Biochemistry & Molecular Biology

Loss and Re-emergence of Legs in Snakes by Modular Evolution of Sonic hedgehog and HOXD Enhancers

Francisca Leal et al.

CURRENT BIOLOGY (2016)

Article Developmental Biology

Shh and ZRS enhancer colocalisation is specific to the zone of polarising activity

Iain Williamson et al.

DEVELOPMENT (2016)

Article Genetics & Heredity

Phenotypic subregions within the split-hand/foot malformation 1 locus

Malene B. Rasmussen et al.

HUMAN GENETICS (2016)

Review Biochemistry & Molecular Biology

Looking beyond the genes: the role of non-coding variants in human disease

Malte Spielmann et al.

HUMAN MOLECULAR GENETICS (2016)

Article Multidisciplinary Sciences

Modulation of tissue repair by regeneration enhancer elements

Junsu Kang et al.

NATURE (2016)

Article Multidisciplinary Sciences

Evolution of Hoxa11 regulation in vertebrates is linked to the pentadactyl state

Yacine Kherdjemil et al.

NATURE (2016)

Article Multidisciplinary Sciences

Formation of new chromatin domains determines pathogenicity of genomic duplications

Martin Franke et al.

NATURE (2016)

Article Multidisciplinary Sciences

A developmental coordinate of pluripotency among mice, monkeys and humans

Tomonori Nakamura et al.

NATURE (2016)

Article Genetics & Heredity

Transcriptomic and epigenomic characterization of the developing bat wing

Walter L. Eckalbar et al.

NATURE GENETICS (2016)

Article Multidisciplinary Sciences

Regulatory evolution of Tbx5 and the origin of paired appendages

Noritaka Adachi et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Genetics & Heredity

Bat Accelerated Regions Identify a Bat Forelimb Specific Enhancer in the HoxD Locus

Betty M. Booker et al.

PLOS GENETICS (2016)

Article Developmental Biology

Epigenetic modification maintains intrinsic limb-cell identity in Xenopus limb bud regeneration

Shinichi Hayashi et al.

DEVELOPMENTAL BIOLOGY (2015)

Review Biochemistry & Molecular Biology

Structure, function and evolution of topologically associating domains (TADs) at HOX loci

Nicolas Lonfat et al.

FEBS LETTERS (2015)

Review Biotechnology & Applied Microbiology

Decoding enhancers using massively parallel reporter assays

Fumitaka Inoue et al.

GENOMICS (2015)

Article Orthopedics

Whole Transcriptome Expression Profiling of Mouse Limb Tendon Development by Using RNA-Seq

Han Liu et al.

JOURNAL OF ORTHOPAEDIC RESEARCH (2015)

Review Genetics & Heredity

High-throughput functional genomics using CRISPR-Cas9

Ophir Shalem et al.

NATURE REVIEWS GENETICS (2015)

Article Multidisciplinary Sciences

Deep conservation of wrist and digit enhancers in fish

Andrew R. Gehrke et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Letter Genetics & Heredity

A Chromosomal 5q31.1 Gain Involving PITX1 Causes Liebenberg Syndrome

Deirdre Maire Seoighe et al.

AMERICAN JOURNAL OF MEDICAL GENETICS PART A (2014)

Article Developmental Biology

Heterozygous DLX5 Nonsense Mutation Associated with Isolated Split-Hand/Foot Malformation with Reduced Penetrance and Variable Expressivity in Two Unrelated Families

Anna Sowinska-Seidler et al.

BIRTH DEFECTS RESEARCH PART A-CLINICAL AND MOLECULAR TERATOLOGY (2014)

Article Developmental Biology

Genome-wide identification of signaling center enhancers in the developing limb

Julia E. VanderMeer et al.

DEVELOPMENT (2014)

Article Developmental Biology

Development of five digits is controlled by a bipartite long-range cis-regulator

Laura A. Lettice et al.

DEVELOPMENT (2014)

Article Biochemistry & Molecular Biology

Exome sequencing reveals a heterozygous DLX5 mutation in a Chinese family with autosomal-dominant split-hand/foot malformation

Xue Wang et al.

EUROPEAN JOURNAL OF HUMAN GENETICS (2014)

Article Multidisciplinary Sciences

Attenuated sensing of SHH by Ptch1 underlies evolution of bovine limbs

Javier Lopez-Rios et al.

NATURE (2014)

Article Multidisciplinary Sciences

Patterning and post-patterning modes of evolutionary digit loss in mammals

Kimberly L. Cooper et al.

NATURE (2014)

Article Biology

Unique expression patterns of multiple key genes associated with the evolution of mammalian flight

Zhe Wang et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2014)

Review Cell Biology

In search of the determinants of enhancer-promoter interaction specificity

Joris van Arensbergen et al.

TRENDS IN CELL BIOLOGY (2014)

Article Biochemistry & Molecular Biology

Conservation and Divergence of Regulatory Strategies at Hox Loci and the Origin of Tetrapod Digits

Joost M. Woltering et al.

PLOS BIOLOGY (2014)

Article Genetics & Heredity

GATA6 Is a Crucial Regulator of Shh in the Limb Bud

Elena Kozhemyakina et al.

PLOS GENETICS (2014)

Article Biochemistry & Molecular Biology

The Evolution of Lineage-Specific Regulatory Activities in the Human Embryonic Limb

Justin Cotney et al.

Article Developmental Biology

Pitx1 broadly associates with limb enhancers and is enriched on hindlimb cis-regulatory elements

Carlos R. Infante et al.

DEVELOPMENTAL BIOLOGY (2013)

Article Biochemistry & Molecular Biology

The genomic landscape of cohesin-associated chromatin interactions

Laura E. DeMare et al.

GENOME RESEARCH (2013)

Article Multidisciplinary Sciences

Multiple phases of chondrocyte enlargement underlie differences in skeletal proportions

Kimberly L. Cooper et al.

NATURE (2013)

Article Multidisciplinary Sciences

A Switch Between Topological Domains Underlies HoxD Genes Collinearity in Mouse Limbs

Guillaume Andrey et al.

SCIENCE (2013)

Review Genetics & Heredity

The origin of the tetrapod limb: from expeditions to enhancers

Igor Schneider et al.

TRENDS IN GENETICS (2013)

Article Genetics & Heredity

Homeotic Arm-to-Leg Transformation Associated with Genomic Rearrangements at the PITX1 Locus

Malte Spielmann et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2012)

Article Developmental Biology

Hox genes regulate the onset of Tbx5 expression in the forelimb

Carolina Minguillon et al.

DEVELOPMENT (2012)

Article Biochemistry & Molecular Biology

Coding exons function as tissue-specific enhancers of nearby genes

Ramon Y. Birnbaum et al.

GENOME RESEARCH (2012)

Article Biochemistry & Molecular Biology

Functional characterization of tissue-specific enhancers in the DLX5/6 locus

Ramon Y. Birnbaum et al.

HUMAN MOLECULAR GENETICS (2012)

Article Evolutionary Biology

Disparate Igf1 Expression and Growth in the Fore- and Hind Limbs of a Marsupial Mammal (Monodelphis domestica)

Karen E. Sears et al.

JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION (2012)

Article Genetics & Heredity

Identification of a novel DLX5 mutation in a family with autosomal recessive split hand and foot malformation

Hanan E. Shamseldin et al.

JOURNAL OF MEDICAL GENETICS (2012)

Article Multidisciplinary Sciences

Transcriptional Enhancers in Protein-Coding Exons of Vertebrate Developmental Genes

Deborah I. Ritter et al.

PLOS ONE (2012)

Article Biology

Repeated modification of early limb morphogenesis programmes underlies the convergence of relative limb length in Anolis lizards

Thomas J. Sanger et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)

Review Anatomy & Morphology

cis-Regulatory Mutations Are a Genetic Cause of Human Limb Malformations

Julia E. VanderMeer et al.

DEVELOPMENTAL DYNAMICS (2011)

Article Evolutionary Biology

Developmental basis of mammalian digit reduction: a case study in pigs

Karen E. Sears et al.

EVOLUTION & DEVELOPMENT (2011)

Article Genetics & Heredity

Enhancer-adoption as a mechanism of human developmental disease

Laura A. Lettice et al.

HUMAN MUTATION (2011)

Review Biotechnology & Applied Microbiology

A Symphony of Regulations Centered on p63 to Control Development of Ectoderm-Derived Structures

Luisa Guerrini et al.

JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY (2011)

Review Genetics & Heredity

Charting histone modifications and the functional organization of mammalian genomes

Vicky W. Zhou et al.

NATURE REVIEWS GENETICS (2011)

Article Biochemistry & Molecular Biology

Transcription initiation platforms and GTF recruitment at tissue-specific enhancers and promoters

Frederic Koch et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)

Article Multidisciplinary Sciences

Appendage expression driven by the Hoxd Global Control Region is an ancient gnathostome feature

Igor Schneider et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Developmental Biology

Developmental origins of precocial forelimbs in marsupial neonates

Anna L. Keyte et al.

DEVELOPMENT (2010)

Article Multidisciplinary Sciences

Adaptive Evolution of Pelvic Reduction in Sticklebacks by Recurrent Deletion of a Pitx1 Enhancer

Yingguang Frank Chan et al.

SCIENCE (2010)

Article Multidisciplinary Sciences

Divergent transcriptional activities determine limb identity

Jean-Francois Ouimette et al.

NATURE COMMUNICATIONS (2010)

Article Developmental Biology

Patched 1 is a crucial determinant of asymmetry and digit number in the vertebrate limb

Natalie C. Butterfield et al.

DEVELOPMENT (2009)

Article Multidisciplinary Sciences

ChIP-seq accurately predicts tissue-specific activity of enhancers

Axel Visel et al.

NATURE (2009)

Review Genetics & Heredity

Vertebrate limb bud development: moving towards integrative analysis of organogenesis

Rolf Zeller et al.

NATURE REVIEWS GENETICS (2009)

Article Multidisciplinary Sciences

Tbx4/5 gene duplication and the origin of vertebrate paired appendages

Carolina Minguillon et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Review Cell Biology

Regulatory divergence modifies limb length between mammals

Chris J. Cretekos et al.

GENES & DEVELOPMENT (2008)

Article Multidisciplinary Sciences

The pectoral fin of Panderichthys and the origin of digits

Catherine A. Boisvert et al.

NATURE (2008)

Article Multidisciplinary Sciences

A second wave of Sonic hedgehog expression during the development of the bat limb

Dorit Hockman et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Evolutionary Biology

Fish fingers: Digit homologues in Sarcopterygian fish fins

Zerina Johanson et al.

JOURNAL OF EXPERIMENTAL ZOOLOGY PART B-MOLECULAR AND DEVELOPMENTAL EVOLUTION (2007)

Article Multidisciplinary Sciences

An autopodial-like pattern of Hox expression in the fins of a basal actinopterygian fish

Marcus C. Davis et al.

NATURE (2007)

Article Developmental Biology

Isolation, genomic structure and developmental expression of Fgf8 in the short-tailed fruit bat Carollia perspicillata

Chris J. Cretekos et al.

INTERNATIONAL JOURNAL OF DEVELOPMENTAL BIOLOGY (2007)

Article Developmental Biology

Pitx1 determines the morphology of muscle, tendon, and bones of the hindlimb

April DeLaurier et al.

DEVELOPMENTAL BIOLOGY (2006)

Article Multidisciplinary Sciences

Developmental basis for hind-limb loss in dolphins and origin of the cetacean bodyplan

J. G. M. Thewissen et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

Development of bat flight: Morphologic and molecular evolution of bat wing digits

KE Sears et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Multidisciplinary Sciences

The pectoral fin of Tiktaalik roseae and the origin of the tetrapod limb

NH Shubin et al.

NATURE (2006)

Article Developmental Biology

A stepwise model system for limb regeneration

T Endo et al.

DEVELOPMENTAL BIOLOGY (2004)

Article Developmental Biology

Tbx5 is required for forelimb bud formation and continued outgrowth

C Rallis et al.

DEVELOPMENT (2003)

Article Multidisciplinary Sciences

T-box gene tbx5 is essential for formation of the pectoral limb bud

DG Ahn et al.

NATURE (2002)

Article Multidisciplinary Sciences

Disruption of a long-range cis-acting regulator for Shh causes preaxial polydactyly

LA Lettice et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)

Article Genetics & Heredity

A 117-kb microdeletion removing HOXD9-HOXD13 and EVX2 causes synpolydactyly

FR Goodman et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2002)

Article Biochemistry & Molecular Biology

WNT signals control FGF-dependent limb initiation and AER induction in the chick embryo

Y Kawakami et al.

Article Genetics & Heredity

Split-hand/split-foot malformation is caused by mutations in the p63 gene on 3q27

P Ianakiev et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2000)