4.1 Article

Identifying differential networks based on multi-platform gene expression data

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Statistics & Probability

Estimation Stability With Cross-Validation (ESCV)

Chinghway Lim et al.

JOURNAL OF COMPUTATIONAL AND GRAPHICAL STATISTICS (2016)

Article Biochemistry & Molecular Biology

Personalized characterization of diseases using sample-specific networks

Xiaoping Liu et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Multidisciplinary Sciences

Part mutual information for quantifying direct associations in networks

Juan Zhao et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Biochemical Research Methods

DINGO: differential network analysis in genomics

Min Jin Ha et al.

BIOINFORMATICS (2015)

Article Biochemical Research Methods

Determining minimum set of driver nodes in protein-protein interaction networks

Xiao-Fei Zhang et al.

BMC BIOINFORMATICS (2015)

Article Biotechnology & Applied Microbiology

Identifying binary protein-protein interactions from affinity purification mass spectrometry data

Xiao-Fei Zhang et al.

BMC GENOMICS (2015)

Article Biochemistry & Molecular Biology

Conditional mutual inclusive information enables accurate quantification of associations in gene regulatory networks

Xiujun Zhang et al.

NUCLEIC ACIDS RESEARCH (2015)

Review Oncology

The dynamic control of signal transduction networks in cancer cells

Walter Kolch et al.

NATURE REVIEWS CANCER (2015)

Article Biochemical Research Methods

Gene Sets Net Correlations Analysis (GSNCA): a multivariate differential coexpression test for gene sets

Yasir Rahmatallah et al.

BIOINFORMATICS (2014)

Article Biochemical Research Methods

PLIDA: cross-platform gene expression normalization using perturbed topic models

Amit G. Deshwar et al.

BIOINFORMATICS (2014)

Article Biology

Direct estimation of differential networks

Sihai Dave Zhao et al.

BIOMETRIKA (2014)

Article Biochemical Research Methods

Detecting temporal protein complexes from dynamic protein-protein interaction networks

Le Ou-Yang et al.

BMC BIOINFORMATICS (2014)

Article Biochemical Research Methods

Gene differential coexpression analysis based on biweight correlation and maximum clique

Chun-Hou Zheng et al.

BMC BIOINFORMATICS (2014)

Article Statistics & Probability

The joint graphical lasso for inverse covariance estimation across multiple classes

Patrick Danaher et al.

JOURNAL OF THE ROYAL STATISTICAL SOCIETY SERIES B-STATISTICAL METHODOLOGY (2014)

Review Oncology

Overcoming acquired resistance to anticancer therapy: focus on the PI3K/AKT/mTOR pathway

Howard A. Burris

CANCER CHEMOTHERAPY AND PHARMACOLOGY (2013)

Article Biotechnology & Applied Microbiology

Network deconvolution as a general method to distinguish direct dependencies in networks

Soheil Feizi et al.

NATURE BIOTECHNOLOGY (2013)

Article Multidisciplinary Sciences

Upregulated expression of FGF13/FHF2 mediates resistance to platinum drugs in cervical cancer cells

Tomoko Okada et al.

SCIENTIFIC REPORTS (2013)

Article Biochemical Research Methods

Inferring gene regulatory networks by ANOVA

Robert Kueffner et al.

BIOINFORMATICS (2012)

Article Multidisciplinary Sciences

Pancreatic cancer genomes reveal aberrations in axon guidance pathway genes

Andrew V. Biankin et al.

NATURE (2012)

Article Biochemical Research Methods

Wisdom of crowds for robust gene network inference

Daniel Marbach et al.

NATURE METHODS (2012)

Article Biology

Joint estimation of multiple graphical models

Jian Guo et al.

BIOMETRIKA (2011)

Article Biochemical Research Methods

Link-based quantitative methods to identify differentially coexpressed genes and gene Pairs

Hui Yu et al.

BMC BIOINFORMATICS (2011)

Review Oncology

Platinum resistance in breast and ovarian cancer cell lines

Niels Eckstein

JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH (2011)

Article Multidisciplinary Sciences

Integrated genomic analyses of ovarian carcinoma

D. Bell et al.

NATURE (2011)

Review Oncology

Cancer research: past, present and future

Ya Cao et al.

NATURE REVIEWS CANCER (2011)

Article Oncology

Inhibition of FGFR2 and FGFR1 increases cisplatin sensitivity in ovarian cancer

Claire Cole et al.

CANCER BIOLOGY & THERAPY (2010)

Review Multidisciplinary Sciences

Molecular networks as sensors and drivers of common human diseases

Eric E. Schadt

NATURE (2009)

Article Biochemical Research Methods

Inferring gene regulatory networks from multiple microarray datasets

Yong Wang et al.

BIOINFORMATICS (2006)

Article Biochemical Research Methods

ARACNE: An algorithm for the reconstruction of gene regulatory networks in a mammalian cellular context

AA Margolin et al.

BMC BIOINFORMATICS (2006)

Article Biochemistry & Molecular Biology

A shrinkage approach to large-scale covariance matrix estimation and implications for functional genomics

J Schafer et al.

STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY (2005)

Review Oncology

A census of human cancer genes

PA Futreal et al.

NATURE REVIEWS CANCER (2004)

Article Statistics & Probability

Sparse graphical models for exploring gene expression data

A Dobra et al.

JOURNAL OF MULTIVARIATE ANALYSIS (2004)

Article Biochemistry & Molecular Biology

KEGG: Kyoto Encyclopedia of Genes and Genomes

M Kanehisa et al.

NUCLEIC ACIDS RESEARCH (2000)