4.7 Article

Optimal descriptor as a translator of eclectic data into prediction of cytotoxicity for metal oxide nanoparticles under different conditions

期刊

ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY
卷 112, 期 -, 页码 39-45

出版社

ACADEMIC PRESS INC ELSEVIER SCIENCE
DOI: 10.1016/j.ecoenv.2014.10.003

关键词

QSAR; Quasi-SMILES; Quasi-QSAR, Nano-QSAR; Monte Carlo method; Cytotoxicity; Metal oxide nanoparticle

资金

  1. EC project PreNanoTox [309666]
  2. EC project NanoPUZZLES [309837]
  3. EU project PROSIL under the LIFE program [LIFE12 ENV/IT/000154]
  4. National Science Foundation [NSF/CREST HRD-0833178]
  5. EPSCoR [362492-190200-01/NSFEPS-090378]
  6. Division Of Human Resource Development
  7. Direct For Education and Human Resources [0833178] Funding Source: National Science Foundation

向作者/读者索取更多资源

The Monte Carlo technique has been used to build up quantitative structure-activity relationships (QSARs) for prediction of dark cytotoxicity and photo-induced cytotoxicity of metal oxide nanoparticles to bacteria Escherichia coli (minus logarithm of lethal concentration for 50% bacteria pLC50, LC50 in mol/L). The representation of nanoparticles include (i) in the case of the dark cytotoxicity a simplified molecular input-line entry system (SMILES), and (ii) in the case of photo-induced cytotoxicity a SMILES plus symbol The predictability of the approach is checked up with six random distributions of available data into the visible training and calibration sets, and invisible validation set. The statistical characteristics of these models are correlation coefficient 0.90-0.94 (training set) and 0.73-0.98 (validation set). (C) 2014 Elsevier Inc. All rights reserved.

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