期刊
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY
卷 139, 期 40, 页码 13985-13988出版社
AMER CHEMICAL SOC
DOI: 10.1021/jacs.7b07383
关键词
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资金
- MINECO [CTQ2014-52658-R, BFU2014-61670-EXP, BFU2014-52864-R]
- European Research Council (ERC SimDNA)
- European Union's Horizon program [676556]
- Biomolecular and Bioinformatics Resources Platform [ISCIII PT 13/0001/0030]
- MINECO (Government of Spain)
- ADR University
We report here the solution structure of several repetitive DNA sequences containing d(TCGT-TCCGT) and related repeats. At physiological pH, these sequences fold into i-motif like quadruplexes in which every two repeats a globular structure is stabilized by two hemiprotonated C:C+ base pairs, flanked by two minor groove tetrads resulting from the association of G:C or G:T base pairs. The interaction between the minor groove tetrads and the nearby C:C+ base pairs affords a strong stabilization, which results in effective pH(T) values above 7.5. Longer sequences with more than two repeats are able to fold in tandem, forming a rosary bead-like structure. Bioinformatics analysis shows that these sequences are prevalent in the human genome, and are present in development-related genes.
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