期刊
JOURNAL OF MOLECULAR GRAPHICS & MODELLING
卷 72, 期 -, 页码 96-105出版社
ELSEVIER SCIENCE INC
DOI: 10.1016/j.jmgm.2016.12.018
关键词
beta TrCP1; ACV; Molecular docking; Molecular dynamics simulation
The critical role of beta TrCP1 in cancer development makes it a discerning target for the development of small drug like molecules. Currently, no inhibitor exists that is able to target its substrate binding site. Through molecular docking and dynamics simulation assays, we explored the comparative binding pattern of beta TrCP1-WD40 domain with ACV and its phospho-derivatives (ACVMP, ACVDP and ACVTP). Consequently, through principal component analysis, beta TrCP1-ACVTP was found to be more stable complex by obscuring a reduced conformational space than other systems. Thus based on the residual contribution and hydrogen bonding pattern, ACVTP was considered as a noteworthy inhibitor which demarcated binding in the cleft formed by beta TrCP1-WD40 specific beta-propeller. The outcomes of this study may provide a platform for rational design of specific and potent Inhibitor against beta TrCP1, with special emphasis on anticancer activity. (C) 2016 Elsevier Inc. All rights reserved.
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