期刊
JOURNAL OF COMPUTATIONAL BIOLOGY
卷 24, 期 5, 页码 447-449出版社
MARY ANN LIEBERT, INC
DOI: 10.1089/cmb.2016.0213
关键词
genome browser; next generation sequencing; Python; R; visualization; WordPress
类别
资金
- Operational Programme of Youth Employment, European Social Fund (ESF), Junta de Castilla y Leon (JCyL)
- Spanish Ministry of Economy, Industry and Competitiveness (MINECO) [PTA2015-10483-I]
Genome browsers are useful not only for showing final results but also for improving analysis protocols, testing data quality, and generating result drafts. Its integration in analysis pipelines allows the optimization of parameters, which leads to better results. New developments that facilitate the creation and utilization of genome browsers could contribute to improving analysis results and supporting the quick visualization of genomic data. D3 Genome Browser is an interactive genome browser that can be easily integrated in analysis protocols and shared on the Web. It is distributed as an R package, a Python module, and a WordPress plugin to facilitate its integration in pipelines and the utilization of platform capabilities. It is compatible with popular data formats such as GenBank, GFF, BED, FASTA, and VCF, and enables the exploration of genomic data with a Web browser.
作者
我是这篇论文的作者
点击您的名字以认领此论文并将其添加到您的个人资料中。
推荐
暂无数据