4.3 Article

Protein-ion Interactions: Simulations of Bovine Serum Albumin in Physiological Solutions of NaCl, KCl and LiCl

期刊

ISRAEL JOURNAL OF CHEMISTRY
卷 57, 期 5, 页码 403-412

出版社

WILEY-V C H VERLAG GMBH
DOI: 10.1002/ijch.201600119

关键词

specific ion interactions; molecular dynamics simulations

资金

  1. Swedish National Infrastructure for Computing (SNIC) at the centre for scientific and technical computing at Lund University (Lunarc) [SNIC 2015/1-226]
  2. PDC Center for High Performance Computing at the KTH Royal Institute of Technology [SNIC 2016/1-222]
  3. PRID

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Specific interactions that depend on the nature of electrolytes are observed when proteins and other molecules are studied by potentiometric, spectroscopic and theoretical methods at high salt concentrations. More recently, it became clear that such interactions may also be observed in solutions that can be described by the Debye-Huckel theory, i.e., at physiological (0.1moldm(-3)) and lower concentrations. We carried out molecular dynamics simulations of bovine serum albumin in physiological solutions at T=300 and 350K. Analysis of the simulations revealed some differences between LiCl solutions and those of NaCl and KCl. The binding of Li+ ions to the protein was associated with a negative free energy of interaction whereas much fewer Na+ and K+ ions were associated with the protein surface. Interestingly, unlike other proteins BSA does not show a preference to Na+ over K+. Quantum chemical calculations identified a significant contribution from polarisation to the hydration of Li+ and (to a lesser degree) Na+, which may indicate that polarisable force-fields will provide more accurate results for such systems.

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