4.3 Review

The future of scientific workflows

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Editorial Material Multidisciplinary Sciences

Enhancing reproducibility for computational methods

Victoria Stodden et al.

SCIENCE (2016)

Proceedings Paper Computer Science, Hardware & Architecture

Bredala: Semantic Data Redistribution for In Situ Applications

Matthieu Dreher et al.

2016 IEEE INTERNATIONAL CONFERENCE ON CLUSTER COMPUTING (CLUSTER) (2016)

Article Computer Science, Theory & Methods

Pegasus, a workflow management system for science automation

Ewa Deelman et al.

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE (2015)

Article Computer Science, Hardware & Architecture

Parallel Reproducible Summation

James Demmel et al.

IEEE TRANSACTIONS ON COMPUTERS (2015)

Proceedings Paper Computer Science, Hardware & Architecture

On the Need for Reproducible Numerical Accuracy through Intelligent Runtime Selection of Reduction Algorithms at the Extreme Scale

Dylan Chapp et al.

2015 IEEE INTERNATIONAL CONFERENCE ON CLUSTER COMPUTING - CLUSTER 2015 (2015)

Article Computer Science, Information Systems

Similarity assessment and efficient retrieval of semantic workflows

Ralph Bergmann et al.

INFORMATION SYSTEMS (2014)

Article Biochemical Research Methods

Likelihood-Based Gene Annotations for Gap Filling and Quality Assessment in Genome-Scale Metabolic Models

Matthew N. Benedict et al.

PLOS COMPUTATIONAL BIOLOGY (2014)

Proceedings Paper Computer Science, Hardware & Architecture

Flexpath: Type-Based Publish/Subscribe System for Large-scale Science Analytics

Jai Dayal et al.

2014 14TH IEEE/ACM INTERNATIONAL SYMPOSIUM ON CLUSTER, CLOUD AND GRID COMPUTING (CCGRID) (2014)

Proceedings Paper Computer Science, Theory & Methods

Flexible Scheduling and Control of Bandwidth and In-transit Services for End-to-End Application Workflows

Mehmet Fatih Aktas et al.

2014 FOURTH INTERNATIONAL WORKSHOP ON NETWORK-AWARE DATA MANAGEMENT (NDM) (2014)

Proceedings Paper Computer Science, Theory & Methods

Combining Workflow Templates with a Shared Space-based Execution Model

Javier Rojas Balderrama et al.

2014 9TH WORKSHOP ON WORKFLOWS IN SUPPORT OF LARGE-SCALE SCIENCE (WORKS) (2014)

Proceedings Paper Computer Science, Information Systems

A Tale of Two Data-Intensive Paradigms: Applications, Abstractions, and Architectures

Shantenu Jha et al.

2014 IEEE INTERNATIONAL CONGRESS ON BIG DATA (BIGDATA CONGRESS) (2014)

Proceedings Paper Computer Science, Hardware & Architecture

Designing Bit-Reproducible Portable High-Performance Applications

Andrea Arteaga et al.

2014 IEEE 28TH INTERNATIONAL PARALLEL AND DISTRIBUTED PROCESSING SYMPOSIUM (2014)

Proceedings Paper Computer Science, Hardware & Architecture

Extreme-scale viability of collective communication for resilient task scheduling and work stealing

Jeremiah Wilke et al.

2014 44TH ANNUAL IEEE/IFIP INTERNATIONAL CONFERENCE ON DEPENDABLE SYSTEMS AND NETWORKS (DSN) (2014)

Article Computer Science, Theory & Methods

Characterizing and profiling scientific workflows

Gideon Juve et al.

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE (2013)

Article Biochemistry & Molecular Biology

The Taverna workflow suite: designing and executing workflows of Web Services on the desktop, web or in the cloud

Katherine Wolstencroft et al.

NUCLEIC ACIDS RESEARCH (2013)

Proceedings Paper Computer Science, Information Systems

On the Reproducibility of MPI Reduction Operations

Pavan Balaji et al.

2013 IEEE 15TH INTERNATIONAL CONFERENCE ON HIGH PERFORMANCE COMPUTING AND COMMUNICATIONS & 2013 IEEE INTERNATIONAL CONFERENCE ON EMBEDDED AND UBIQUITOUS COMPUTING (HPCC_EUC) (2013)

Article Computer Science, Information Systems

A Provenance-based Adaptive Scheduling Heuristic for Parallel Scientific Workflows in Clouds

Daniel de Oliveira et al.

JOURNAL OF GRID COMPUTING (2012)

Article Computer Science, Theory & Methods

Storing, reasoning, and querying OPM-compliant scientific workflow provenance using relational databases

Chunhyeok Lim et al.

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE (2011)

Article Computer Science, Theory & Methods

The Open Provenance Model core specification (v1.1)

Luc Moreau et al.

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE (2011)

Article Computer Science, Theory & Methods

Swift: A language for distributed parallel scripting

Michael Wilde et al.

PARALLEL COMPUTING (2011)

Article Computer Science, Information Systems

Scalable SQL and NoSQL data stores

Rick Cattell

SIGMOD RECORD (2011)

Article Geochemistry & Geophysics

CyberShake: A Physics-Based Seismic Hazard Model for Southern California

Robert Graves et al.

PURE AND APPLIED GEOPHYSICS (2011)

Article Computer Science, Hardware & Architecture

PARALLEL SCRIPTING FOR APPLICATIONS AT THE PETASCALE AND BEYOND

Michael Wilde et al.

COMPUTER (2009)

Article Computer Science, Software Engineering

Multiobjective differential evolution for scheduling workflow applications on global Grids

A. K. M. Khaled Ahsan Talukder et al.

CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE (2009)

Article Computer Science, Hardware & Architecture

FAULT TOLERANCE IN PETASCALE/EXASCALE SYSTEMS: CURRENT KNOWLEDGE, CHALLENGES AND RESEARCH OPPORTUNITIES

Franck Cappello

INTERNATIONAL JOURNAL OF HIGH PERFORMANCE COMPUTING APPLICATIONS (2009)

Article Computer Science, Software Engineering

Time dependent processing in a parallel pipeline architecture

John Biddiscombe et al.

IEEE TRANSACTIONS ON VISUALIZATION AND COMPUTER GRAPHICS (2007)

Article Computer Science, Interdisciplinary Applications

Provenance for visualizations - Reproducibility and beyond

Claudio T. Silva et al.

COMPUTING IN SCIENCE & ENGINEERING (2007)

Article Computer Science, Theory & Methods

Performance metrics and ontologies for Grid workflows

Hong-Linh Truong et al.

FUTURE GENERATION COMPUTER SYSTEMS-THE INTERNATIONAL JOURNAL OF ESCIENCE (2007)

Article Biochemistry & Molecular Biology

Development and validation of a modular, extensible docking program: DOCK 5

Demetri T. Moustakas et al.

JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN (2006)

Article Computer Science, Software Engineering

Programming scientific and distributed workflow with Triana services

David Churches et al.

CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE (2006)

Article Computer Science, Software Engineering

Taverna: lessons in creating a workflow environment for the life sciences

Tom Oinn et al.

CONCURRENCY AND COMPUTATION-PRACTICE & EXPERIENCE (2006)

Article Biochemistry & Molecular Biology

Galaxy: A platform for interactive large-scale genome analysis

B Giardine et al.

GENOME RESEARCH (2005)

Article Computer Science, Interdisciplinary Applications

High-precision floating-point arithmetic in scientific computation

DH Bailey

COMPUTING IN SCIENCE & ENGINEERING (2005)

Article Biochemical Research Methods

Parallel BLAST on split databases

DR Mathog

BIOINFORMATICS (2003)