相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。c-di-GMP Arms an Anti-σ to Control Progression of Multicellular Differentiation in Streptomyces
Kelley A. Gallagher et al.
MOLECULAR CELL (2020)
RNA extension drives a stepwise displacement of an initiation-factor structural module in initial transcription
Lingting Li et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Stepwise Promoter Melting by Bacterial RNA Polymerase
James Chen et al.
MOLECULAR CELL (2020)
Mechanisms of σ54-Dependent Transcription Initiation and Regulation
Amy E. Danson et al.
JOURNAL OF MOLECULAR BIOLOGY (2019)
CarD and RbpA modify the kinetics of initial transcription and slow promoter escape of the Mycobacterium tuberculosis RNA polymerase
Drake Jensen et al.
NUCLEIC ACIDS RESEARCH (2019)
Structural basis for the recognition of MucA by MucB and AlgU in Pseudomonas aeruginosa
Shanshan Li et al.
FEBS JOURNAL (2019)
The dormancy-specific regulator, SutA, is intrinsically disordered and modulates transcription initiation in Pseudomonas aeruginosa
Megan Bergkessel et al.
MOLECULAR MICROBIOLOGY (2019)
Structural basis of σ appropriation
Jing Shi et al.
NUCLEIC ACIDS RESEARCH (2019)
Structural basis for transcription activation by Crl through tethering of σs and RNA polymerase
Alexis Jaramillo Cartagena et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Structures of an RNA polymerase promoter melting intermediate elucidate DNA unwinding
Hande Boyaci et al.
NATURE (2019)
Structural Basis of Transcription Inhibition by Fidaxomicin (Lipiarmycin A3)
Wei Lin et al.
MOLECULAR CELL (2018)
Allosteric Effector ppGpp Potentiates the Inhibition of Transcript Initiation by DksA
Vadim Molodtsov et al.
MOLECULAR CELL (2018)
The crystal structure of the RsbN-σBIdN complex from Streptomyces venezuelae defines a new structural class of anti-σ factor
Maria A. Schumacher et al.
NUCLEIC ACIDS RESEARCH (2018)
Structural insights into the unique mechanism of transcription activation by Caulobacter crescentus GcrA
Xiaoxian Wu et al.
NUCLEIC ACIDS RESEARCH (2018)
The RNA polymerase clamp interconverts dynamically among three states and is stabilized in a partly closed state by ppGpp
Diego Duchi et al.
NUCLEIC ACIDS RESEARCH (2018)
Fidaxomicin jams Mycobacterium tuberculosis RNA polymerase motions needed for initiation via RbpA contacts
Hande Boyaci et al.
ELIFE (2018)
Single-molecule analysis reveals the mechanism of transcription activation in M. tuberculosis
Rishi Kishore Vishwakarma et al.
SCIENCE ADVANCES (2018)
Mode of Action of Kanglemycin A, an Ansamycin Natural Product that Is Active against Rifampicin-Resistant Mycobacterium tuberculosis
Hamed Mosaei et al.
MOLECULAR CELL (2018)
Rifamycin congeners kanglemycins are active against rifampicin-resistant bacteria via a distinct mechanism
James Peek et al.
NATURE COMMUNICATIONS (2018)
6S RNA Mimics B-Form DNA to Regulate Escherichia coli RNA Polymerase
James Chen et al.
MOLECULAR CELL (2017)
Structural Basis of Mycobacterium tuberculosis Transcription and Transcription Inhibition
Wei Lin et al.
MOLECULAR CELL (2017)
TraR directly regulates transcription initiation by mimicking the combined effects of the global regulators DksA and ppGpp
Saumya Gopalkrishnan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Structural basis of bacterial transcription activation
Bin Liu et al.
SCIENCE (2017)
RNA polymerase motions during promoter melting
Andrey Feklistov et al.
SCIENCE (2017)
Structural insights into the mycobacteria transcription initiation complex from analysis of X-ray crystal structures
Elizabeth A. Hubin et al.
NATURE COMMUNICATIONS (2017)
Structure and function of the mycobacterial transcription initiation complex with the essential regulator RbpA
Elizabeth A. Hubin et al.
ELIFE (2017)
Antibacterial Nucleoside-Analog Inhibitor of Bacterial RNA Polymerase
Sonia I. Maffioli et al.
CELL (2017)
Themes and variations in gene regulation by extracytoplasmic function (ECF) sigma factors
Elena Sineva et al.
CURRENT OPINION IN MICROBIOLOGY (2017)
The essential activities of the bacterial sigma factor
Maria C. Davis et al.
CANADIAN JOURNAL OF MICROBIOLOGY (2017)
Molecular Mechanisms of Transcription Initiation-Structure, Function, and Evolution of TFE/TFIIE-Like Factors and Open Complex Formation
Fabian Blombach et al.
JOURNAL OF MOLECULAR BIOLOGY (2016)
RNA Polymerase Pausing during Initial Transcription
Diego Duchi et al.
MOLECULAR CELL (2016)
Transcription initiation complex structures elucidate DNA opening
C. Plaschka et al.
NATURE (2016)
Local and global regulation of transcription initiation in bacteria
Douglas F. Browning et al.
NATURE REVIEWS MICROBIOLOGY (2016)
Bacterial RNA polymerase can retain σ70 throughout transcription
Timothy T. Harden et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
The bacterial cell cycle regulator GcrA is a σ70 cofactor that drives gene expression from a subset of methylated promoters
Diane L. Haakonsen et al.
GENES & DEVELOPMENT (2015)
E. coli RNA Polymerase Determinants of Open Complex Lifetime and Structure
Emily F. Ruff et al.
JOURNAL OF MOLECULAR BIOLOGY (2015)
Crosslink Mapping at Amino Acid-Base Resolution Reveals the Path of Scrunched DNA in Initial Transcribing Complexes
Jared T. Winkelman et al.
MOLECULAR CELL (2015)
Crystal Structures of the E. coli Transcription Initiation Complexes with a Complete Bubble
Yuhong Zuo et al.
MOLECULAR CELL (2015)
CarD stabilizes mycobacterial open complexes via a two-tiered kinetic mechanism
Jayan Rammohan et al.
NUCLEIC ACIDS RESEARCH (2015)
CBR antimicrobials inhibit RNA polymerase via at least two bridge-helix cap-mediated effects on nucleotide addition
Brian Bae et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Structural, functional, and genetic analyses of the actinobacterial transcription factor RbpA
Elizabeth A. Hubin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Structural Basis of Transcription Inhibition by CBR Hydroxamidines and CBR Pyrazoles
Yu Feng et al.
STRUCTURE (2015)
Leaderless Transcripts and Small Proteins Are Common Features of the Mycobacterial Translational Landscape
Scarlet S. Shell et al.
PLOS GENETICS (2015)
Mycobacterial RNA polymerase forms unstable open promoter complexes that are stabilized by CarD
Elizabeth Davis et al.
NUCLEIC ACIDS RESEARCH (2015)
Bacterial Sigma Factors and Anti-Sigma Factors: Structure, Function and Distribution
Mark S. Paget
BIOMOLECULES (2015)
Initial Events in Bacterial Transcription Initiation
Emily F. Ruff et al.
BIOMOLECULES (2015)
Bacterial Sigma Factors: A Historical, Structural, and Genomic Perspective
Andrey Feklistov et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 68 (2014)
The Crystal Structure of the Anti-σ Factor CnrY in Complex with the σ Factor CnrH Shows a New Structural Class of Anti-σ Factors Targeting Extracytoplasmic Function σ Factors
Antoine P. Maillard et al.
JOURNAL OF MOLECULAR BIOLOGY (2014)
Structural basis for-10 promoter element melting by environmentally induced sigma factors
Sebastien Campagne et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2014)
Distinct functions of the RNA polymerase Σ subunit region 3.2 in RNA priming and promoter escape
Danil Pupov et al.
NUCLEIC ACIDS RESEARCH (2014)
Transcription inhibition by the depsipeptide antibiotic salinamide A
David Degen et al.
ELIFE (2014)
Structural basis for the redox sensitivity of the Mycobacterium tuberculosis SigK-RskA σ-anti-σ complex
Jinal Shukla et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2014)
Transcription Regulation at the Core: Similarities Among Bacterial, Archaeal, and Eukaryotic RNA Polymerases
Kimberly B. Decker et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 67 (2013)
Insights into the Mechanism of Initial Transcription in Escherichia coli RNA Polymerase
Satamita Samanta et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
Mycobacterium tuberculosis RNA Polymerase-binding Protein A (RbpA) and Its Interactions with Sigma Factors
Alessio Bortoluzzi et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
X-ray Crystal Structure of Escherichia coli RNA Polymerase σ70 Holoenzyme
Katsuhiko S. Murakami
JOURNAL OF BIOLOGICAL CHEMISTRY (2013)
The Mechanism of E. coli RNA Polymerase Regulation by ppGpp Is Suggested by the Structure of their Complex
Yuhong Zuo et al.
MOLECULAR CELL (2013)
Design of orthogonal genetic switches based on a crosstalk map of rs, anti-rs, and promoters
Virgil A. Rhodius et al.
MOLECULAR SYSTEMS BIOLOGY (2013)
The actinobacterial transcription factor RbpA binds to the principal sigma subunit of RNA polymerase
Aline Tabib-Salazar et al.
NUCLEIC ACIDS RESEARCH (2013)
Phage T7 Gp2 inhibition of Escherichia coli RNA polymerase involves misappropriation of σ70 domain 1.1
Brian Bae et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Key features of σS required for specific recognition by Crl, a transcription factor promoting assembly of RNA polymerase holoenzyme
Amy B. Banta et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Structure and function of CarD, an essential mycobacterial transcription factor
Devendra B. Srivastava et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Genome-wide Mapping of Transcriptional Start Sites Defines an Extensive Leaderless Transcriptome in Mycobacterium tuberculosis
Teresa Cortes et al.
CELL REPORTS (2013)
Fidaxomicin: A Novel Macrocyclic Antibiotic Approved for Treatment of Clostridium difficile Infection
Anilrudh A. Venugopal et al.
CLINICAL INFECTIOUS DISEASES (2012)
Mycobacterium tuberculosis RbpA protein is a new type of transcriptional activator that stabilizes the ΣA-containing RNA polymerase holoenzyme
Yangbo Hu et al.
NUCLEIC ACIDS RESEARCH (2012)
Structural basis of a protein partner switch that regulates the general stress response of α-proteobacteria
Julien Herrou et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Structural basis for sigma factor mimicry in the general stress response of Alphaproteobacteria
Sebastien Campagne et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Opening and Closing of the Bacterial RNA Polymerase Clamp
Anirban Chakraborty et al.
SCIENCE (2012)
Structural Basis of Transcription Initiation
Yu Zhang et al.
SCIENCE (2012)
Structural Basis for Promoter-10 Element Recognition by the Bacterial RNA Polymerase σ Subunit
Andrey Feklistov et al.
CELL (2011)
New target for inhibition of bacterial RNA polymerase: 'switch region'
Aashish Srivastava et al.
CURRENT OPINION IN MICROBIOLOGY (2011)
Mechanism of Bacterial Transcription Initiation: RNA Polymerase - Promoter Binding, Isomerization to Initiation-Competent Open Complexes, and Initiation of RNA Synthesis
Ruth M. Saecker et al.
JOURNAL OF MOLECULAR BIOLOGY (2011)
Evolution of multisubunit RNA polymerases in the three domains of life
Finn Werner et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Molecular Evolution of Multisubunit RNA Polymerases: Structural Analysis
William J. Lane et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Molecular Evolution of Multisubunit RNA Polymerases: Sequence Analysis
William J. Lane et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Allosteric control of Escherichia coli rRNA promoter complexes by DksA
Steven T. Rutherford et al.
GENES & DEVELOPMENT (2009)
The third pillar of bacterial signal transduction: classification of the extracytoplasmic function (ECF) σ factor protein family
Anna Staron et al.
MOLECULAR MICROBIOLOGY (2009)
Transcription inactivation through local refolding of the RNA polymerase structure
Georgiy A. Belogurov et al.
NATURE (2009)
Direct Detection of Abortive RNA Transcripts in Vivo
Seth R. Goldman et al.
SCIENCE (2009)
The RNA Polymerase Switch Region Is a Target for Inhibitors
Jayanta Mukhopadhyay et al.
CELL (2008)
Regulation of bacterial RNA polymerase sigma factor activity: a structural perspective
Elizabeth A. Campbell et al.
CURRENT OPINION IN MICROBIOLOGY (2008)
The X-ray crystal structure of RNA polymerase from Archaea
Akira Hirata et al.
NATURE (2008)
Advances in bacterial promoter recognition and its control by factors that do not bind DNA
Shanil P. Haugen et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Crystal structure of the Escherichia coli regulator of σ70, Rsd, in complex with σ70 domain 4
Georgia A. Patikoglou et al.
JOURNAL OF MOLECULAR BIOLOGY (2007)
A conserved structural module regulates transcriptional responses to diverse stress signals in bacteria
Elizabeth A. Campbell et al.
MOLECULAR CELL (2007)
Synthesis-mediated release of a small RNA inhibitor of RNA polymerase
Karen M. Wassarman et al.
SCIENCE (2006)
Initial transcription by RNA polymerase proceeds through a DNA-scrunching mechanism
Achillefs N. Kapanidis et al.
SCIENCE (2006)
Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching
Andrey Revyakin et al.
SCIENCE (2006)
Crl facilitates RNA polymerase holoenzyme formation
Tamas Gaal et al.
JOURNAL OF BACTERIOLOGY (2006)
Region 3.2 of the σ subunit contributes to the binding of the 3′-initiating nucleotide in the RNA polymerase active center and facilitates promoter clearance during initiation
Andrey Kulbachinskiy et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
rRNA promoter regulation by nonoptimal binding of a region 1.2: An additional recognition element for RNA polymerase
Shanil P. Haugen et al.
CELL (2006)
Retention of transcription initiation factor σ70 in transcription elongation:: Single-molecule analysis
AN Kapanidis et al.
MOLECULAR CELL (2005)
Sigma and RNA polymerase: An on-again, off-again relationship?
RA Mooney et al.
MOLECULAR CELL (2005)
Structural basis of transcription inhibition by antibiotic streptolydigin
D Temiakov et al.
MOLECULAR CELL (2005)
Inhibition of bacterial RNA polymerase by streptolydigin: Stabilization of a straight-bridge-helix active-center conformation
S Tuske et al.
CELL (2005)
6S RNA is a widespread regulator of eubacterial RNA polymerase that resembles an open promoter
JE Barrick et al.
RNA (2005)
Mechanistic differences in promoter DNA melting by Thermus aquaticus and Escherichia coli RNA polymerases
LA Schroeder et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
A highly conserved 6S RNA structure is required for regulation of transcription
AE Trotochaud et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2005)
Structural, functional, and genetic analysis of sorangicin inhibition of bacterial RNA polymerase
EA Campbell et al.
EMBO JOURNAL (2005)
Crystal structure of the flagellar σ/anti-σ complex σ28/FlgM reveals an intact σ factor in an inactive conformation
MK Sorenson et al.
MOLECULAR CELL (2004)
Oscillating global regulators control the genetic circuit driving a bacterial cell cycle
J Holtzendorff et al.
SCIENCE (2004)
Tethering σ70 to RNA polymerase reveals high in vivo activity of Cr factors and σ70-dependent pausing at promoter-distal locations
RA Mooney et al.
GENES & DEVELOPMENT (2003)
A new class of bacterial RNA polymerase inhibitor affects nucleotide addition
I Artsimovitch et al.
SCIENCE (2003)
In vitro studies of transcript initiation by Escherichia coli RNA polymerase.: 1.: RNA chain initiation, abortive initiation, and promoter escape at three bacteriophage promoters
LLM Hsu et al.
BIOCHEMISTRY (2003)
Co-overexpression of Escherichia coli RNA polymerase subunits allows isolation and analysis of mutant enzymes lacking lineage-specific sequence insertions
I Artsimovitch et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2003)
Crystal structure of Escherichia coli σE with the cytoplasmic domain of its anti-σ RseA
EA Campbell et al.
MOLECULAR CELL (2003)
Multiple sigma subunits and the partitioning of bacterial transcription space
TM Gruber et al.
ANNUAL REVIEW OF MICROBIOLOGY (2003)
Crystal structure of a bacterial RNA polymerase holoenzyme at 2.6 Å resolution
DG Vassylyev et al.
NATURE (2002)
Structural basis of transcription initiation: RNA polymerase holoenzyme at 4 Å resolution
KS Murakami et al.
SCIENCE (2002)
Structural basis of transcription initiation: An RNA polymerase holoenzyme-DNA complex
KS Murakami et al.
SCIENCE (2002)
Crystal structure of the Bacillus stearothermophilus anti-σ factor SpoIIAB with the sporulation σ factor σF
EA Campbell et al.
CELL (2002)
Structure of the bacterial RNA polymerase promoter specificity sigma subunit
EA Campbell et al.
MOLECULAR CELL (2002)
Isolation and characterization of σ70-retaining transcription elongation complexes from Escherichia coli
G Bar-Nahum et al.
CELL (2001)
Translocation of σ70 with RNA polymerase during transcription:: Fluorescence resonance energy transfer assay for movement relative to DNA
J Mukhopadhyay et al.
CELL (2001)
Structural basis of transcription:: An RNA polymerase II elongation complex at 3.3 Å resolution
AL Gnatt et al.
SCIENCE (2001)
Structural mechanism for rifampicin inhibition of bacterial RNA polymerase
EA Campbell et al.
CELL (2001)
Architecture of RNA polymerase II and implications for the transcription mechanism
P Cramer et al.
SCIENCE (2000)
分享论文
