3.8 Article

Genome-Wide Binding Analyses of HOXB1 Revealed a Novel DNA Binding Motif Associated with Gene Repression

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Cell Biology

A six-amino-acid motif is a major determinant in functional evolution of HOX1 proteins

Narendra Pratap Singh et al.

GENES & DEVELOPMENT (2020)

Review Cell Biology

Embryonic timing, axial stem cells, chromatin dynamics, and the Hox clock

Jacqueline Deschamps et al.

GENES & DEVELOPMENT (2017)

Article Multidisciplinary Sciences

Dynamic regulation of Nanog and stem cell-signaling pathways by Hoxa1 during early neuro-ectodermal differentiation of ES cells

Bony De Kumar et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Review Developmental Biology

Segmental arithmetic: summing up the Hox gene regulatory network for hindbrain development in chordates

Hugo J. Parker et al.

WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2017)

Article Developmental Biology

Hoxa1 targets signaling pathways during neural differentiation of ES cells and mouse embryogenesis

Bony De Kumar et al.

DEVELOPMENTAL BIOLOGY (2017)

Article Multidisciplinary Sciences

Survey of variation in human transcription factors reveals prevalent DNA binding changes

Luis A. Barrera et al.

SCIENCE (2016)

Review Genetics & Heredity

To Be Specific or Not: The Critical Relationship Between Hox And TALE Proteins

Samir Merabet et al.

TRENDS IN GENETICS (2016)

Article Biochemistry & Molecular Biology

The sea lamprey meiotic map improves resolution of ancient vertebrate genome duplications

Jeramiah J. Smith et al.

GENOME RESEARCH (2015)

Article Biotechnology & Applied Microbiology

ChIP-nexus enables improved detection of in vivo transcription factor binding footprints

Qiye He et al.

NATURE BIOTECHNOLOGY (2015)

Article Biochemistry & Molecular Biology

DNA-Binding Specificities of Human Transcription Factors

Arttu Jolma et al.

Article Developmental Biology

Evolution of homeobox genes

Peter W. H. Holland

WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2013)

Article Genetics & Heredity

HOXB1 Founder Mutation in Humans Recapitulates the Phenotype of Hoxb1-/- Mice

Bryn D. Webb et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2012)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Review Genetics & Heredity

Transcription factors: from enhancer binding to developmental control

Francois Spitz et al.

NATURE REVIEWS GENETICS (2012)

Review Genetics & Heredity

A Genetic Approach to the Transcriptional Regulation of Hox Gene Clusters

Patrick Tschopp et al.

ANNUAL REVIEW OF GENETICS, VOL 45 (2011)

Article Biochemistry & Molecular Biology

Cofactor Binding Evokes Latent Differences in DNA Binding Specificity between Hox Proteins

Matthew Slattery et al.

Article Multidisciplinary Sciences

Repressor element 1 silencing transcription factor (REST) controls radial migration and temporal neuronal specification during neocortical development

Gail Mandel et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)

Article Biochemistry & Molecular Biology

Deacetylase Inhibitors Dissociate the Histone-Targeting ING2 Subunit from the Sin3 Complex

Karen T. Smith et al.

CHEMISTRY & BIOLOGY (2010)

Review Developmental Biology

Hox genes and regional patterning of the vertebrate body plan

Moises Mallo et al.

DEVELOPMENTAL BIOLOGY (2010)

Review Genetics & Heredity

Determining the specificity of protein-DNA interactions

Gary D. Stormo et al.

NATURE REVIEWS GENETICS (2010)

Review Genetics & Heredity

A census of human transcription factors: function, expression and evolution

Juan M. Vaquerizas et al.

NATURE REVIEWS GENETICS (2009)

Article Multidisciplinary Sciences

Poly(ADP-ribosyl)ation directs recruitment and activation of an ATP-dependent chromatin remodeler

Aaron J. Gottschalk et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Biochemistry & Molecular Biology

Variation in homeodomain DNA binding revealed by high-resolution analysis of sequence preferences

Michael F. Berger et al.

Article Biotechnology & Applied Microbiology

Model-based Analysis of ChIP-Seq (MACS)

Yong Zhang et al.

GENOME BIOLOGY (2008)

Article Multidisciplinary Sciences

Emerging principles of regulatory evolution

Benjamin Prud'homme et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Biotechnology & Applied Microbiology

Quantifying similarity between motifs

Shobhit Gupta et al.

GENOME BIOLOGY (2007)

Review Developmental Biology

Hox cofactors in vertebrate development

CB Moens et al.

DEVELOPMENTAL BIOLOGY (2006)

Review Genetics & Heredity

Modulating Hox gene functions during animal body patterning

JC Pearson et al.

NATURE REVIEWS GENETICS (2005)

Review Neurosciences

The many faces of REST oversee epigenetic programming of neuronal genes

N Ballas et al.

CURRENT OPINION IN NEUROBIOLOGY (2005)

Article Biochemistry & Molecular Biology

Hoxb1 enhancer and control of rhombomere 4 expression:: Complex interplay between PREP1-PBX1-HOXB1 binding sites

E Ferretti et al.

MOLECULAR AND CELLULAR BIOLOGY (2005)

Article Biochemistry & Molecular Biology

From 2R to 3R: evidence for a fish-specific genome duplication (FSGD)

A Meyer et al.

BIOESSAYS (2005)

Article Biochemistry & Molecular Biology

Evolution at two levels: On genes and form

SB Carroll

PLOS BIOLOGY (2005)

Review Multidisciplinary Sciences

Transcription regulation and animal diversity

M Levine et al.

NATURE (2003)

Article Multidisciplinary Sciences

Molecular evolution of FOXP2, a gene involved in speech and language

W Enard et al.

NATURE (2002)

Article Biochemistry & Molecular Biology

TRANSCompel((R)): a database on composite regulatory elements in eukaryotic genes

OV Kel-Margoulis et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Biochemical Research Methods

DTASelect and contrast: Tools for assembling and comparing protein identifications from shotgun proteomics

DL Tabb et al.

JOURNAL OF PROTEOME RESEARCH (2002)

Article Multidisciplinary Sciences

The genetic architecture of divergence between threespine stickleback species

CL Peichel et al.

NATURE (2001)

Article Neurosciences

An impulse to the brain -: using in vivo electroporation

T Inoue et al.

NATURE NEUROSCIENCE (2001)

Article Biotechnology & Applied Microbiology

Large-scale analysis of the yeast proteome by multidimensional protein identification technology

MP Washburn et al.

NATURE BIOTECHNOLOGY (2001)