4.6 Article

Circuitscape in Julia: Empowering Dynamic Approaches to Connectivity Assessment

期刊

LAND
卷 10, 期 3, 页码 -

出版社

MDPI
DOI: 10.3390/land10030301

关键词

Circuitscape; dynamic connectivity; conservation planning; computational ecology; Earth observations; Julia programming language; landscape connectivity; Omniscape

资金

  1. NASA through the Earth Science Applications: Ecological Forecasting program [16-ECO4CAST-0018]
  2. Wilburforce Foundation
  3. Doris Duke Charitable Foundation
  4. NSF's Office of Advanced Cyberinfrastructure [OAC-1835443]

向作者/读者索取更多资源

The conservation field is experiencing rapid growth in spatial data, with a focus on improving movement and connectivity analysis for species and landscapes. By updating and improving tools like Circuitscape and collaborating with computer scientists, conservation efforts can benefit from faster computations and more dynamic assessments, ultimately leading to better incorporation of connectivity science in land use decisions.
The conservation field is experiencing a rapid increase in the amount, variety, and quality of spatial data that can help us understand species movement and landscape connectivity patterns. As interest grows in more dynamic representations of movement potential, modelers are often limited by the capacity of their analytic tools to handle these datasets. Technology developments in software and high-performance computing are rapidly emerging in many fields, but uptake within conservation may lag, as our tools or our choice of computing language can constrain our ability to keep pace. We recently updated Circuitscape, a widely used connectivity analysis tool developed by Brad McRae and Viral Shah, by implementing it in Julia, a high-performance computing language. In this initial re-code (Circuitscape 5.0) and later updates, we improved computational efficiency and parallelism, achieving major speed improvements, and enabling assessments across larger extents or with higher resolution data. Here, we reflect on the benefits to conservation of strengthening collaborations with computer scientists, and extract examples from a collection of 572 Circuitscape applications to illustrate how through a decade of repeated investment in the software, applications have been many, varied, and increasingly dynamic. Beyond empowering continued innovations in dynamic connectivity, we expect that faster run times will play an important role in facilitating coproduction of connectivity assessments with stakeholders, increasing the likelihood that connectivity science will be incorporated in land use decisions.

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