相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Protist taxonomic and functional diversity in soil, freshwater and marine ecosystems
David Singer et al.
ENVIRONMENT INTERNATIONAL (2021)
Environmental drivers of plankton protist communities along latitudinal and vertical gradients in the oldest and deepest freshwater lake
Gwendoline M. David et al.
ENVIRONMENTAL MICROBIOLOGY (2021)
A global overview of the trophic structure within microbiomes across ecosystems
Wu Xiong et al.
ENVIRONMENT INTERNATIONAL (2021)
Freshwater Perkinsea: diversity, ecology and genomic information
M. Jobard et al.
JOURNAL OF PLANKTON RESEARCH (2020)
A metagenomic assessment of microbial eukaryotic diversity in the global ocean
Aleix Obiol et al.
MOLECULAR ECOLOGY RESOURCES (2020)
Tracing the Origin of Planktonic Protists in an Ancient Lake
Nataliia Annenkova et al.
MICROORGANISMS (2020)
Variability and Community Composition of Marine Unicellular Eukaryote Assemblages in a Eutrophic Mediterranean Urban Coastal Area with Marked Plankton Blooms and Red Tides
Savvas Genitsaris et al.
DIVERSITY-BASEL (2020)
Diversity of photosynthetic picoeukaryotes in eutrophic shallow lakes as assessed by combining flow cytometry cell-sorting and high throughput sequencing
Sebastian Metz et al.
FEMS MICROBIOLOGY ECOLOGY (2019)
Diversity, spatial distribution and activity of fungi in freshwater ecosystems
Cecile Lepere et al.
PEERJ (2019)
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2019)
Microbial eukaryotes in the suboxic chemosynthetic ecosystem of Movile Cave, Romania
Guillaume Reboul et al.
ENVIRONMENTAL MICROBIOLOGY REPORTS (2019)
Annual Protist Community Dynamics in a Freshwater Ecosystem Undergoing Contrasted Climatic Conditions: The Saint-Charles River (Canada)
Perrine Cruaud et al.
FRONTIERS IN MICROBIOLOGY (2019)
Widespread Dominance of Kinetoplastids and Unexpected Presence of Diplonemids in Deep Freshwater Lakes
Indranil Mukherjee et al.
FRONTIERS IN MICROBIOLOGY (2019)
Denitrification, anaerobic ammonium oxidation, and dissimilatory nitrate reduction to ammonium in an East African Great Lake (Lake Kivu)
Fleur A. E. Roland et al.
LIMNOLOGY AND OCEANOGRAPHY (2018)
High planktonic diversity in mountain lakes contains similar contributions of autotrophic, heterotrophic and parasitic eukaryotic life forms
Rudiger Ortiz-Alvarez et al.
SCIENTIFIC REPORTS (2018)
Diversity and Evolutionary History of the Symbiontida (Euglenozoa)
Naoji Yubuki et al.
FRONTIERS IN ECOLOGY AND EVOLUTION (2018)
Novel Diversity of Deeply Branching Holomycota and Unicellular Holozoans Revealed by Metabarcoding in Middle Parana River, Argentina
Alicia S. Arroyo et al.
FRONTIERS IN ECOLOGY AND EVOLUTION (2018)
Microbial Food-Web Drivers in Tropical Reservoirs
Carolina Davila Domingues et al.
MICROBIAL ECOLOGY (2017)
Transition boundaries for protistan species turnover in hypersaline waters of different biogeographic regions
Sabine Filker et al.
ENVIRONMENTAL MICROBIOLOGY (2017)
ModelFinder: fast model selection for accurate phylogenetic estimates
Subha Kalyaanamoorthy et al.
NATURE METHODS (2017)
Patterns and Drivers of Vertical Distribution of the Ciliate Community from the Surface to the Abyssopelagic Zone in the Western Pacific Ocean
Feng Zhao et al.
FRONTIERS IN MICROBIOLOGY (2017)
Microbiome Datasets Are Compositional: And This Is Not Optional
Gregory B. Gloor et al.
FRONTIERS IN MICROBIOLOGY (2017)
Parasites dominate hyperdiverse soil protist communities in Neotropical rainforests
Frédéric Mahé et al.
Nature Ecology & Evolution (2017)
Overview of freshwater microbial eukaryotes diversity: a first analysis of publicly available metabarcoding data
Didier Debroas et al.
FEMS MICROBIOLOGY ECOLOGY (2017)
Large variability of bathypelagic microbial eukaryotic communities across the world's oceans
Massimo C. Pernice et al.
ISME JOURNAL (2016)
Functional ecology of aquatic phagotrophic protists - Concepts, limitations, and perspectives
Thomas Weisse et al.
EUROPEAN JOURNAL OF PROTISTOLOGY (2016)
Chemoautotrophy and anoxygenic photosynthesis within the water column of a large meromictic tropical lake (Lake Kivu, East Africa)
Cedric Morana et al.
LIMNOLOGY AND OCEANOGRAPHY (2016)
Status of the Archaeal and Bacterial Census: an Update
Patrick D. Schloss et al.
MBIO (2016)
Infections of Hypostomus spp. by Trypanosoma spp. and leeches: a study of hematology and record of these hirudineans as potential vectors of these hemoflagellates
Lincoln Lima Correa et al.
REVISTA BRASILEIRA DE PARASITOLOGIA VETERINARIA (2016)
Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France)
Cecile Lepere et al.
FRONTIERS IN MICROBIOLOGY (2016)
Resilience of Freshwater Communities of Small Microbial Eukaryotes Undergoing Severe Drought Events
Marianne Simon et al.
FRONTIERS IN MICROBIOLOGY (2016)
Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing
Ramon Massana et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Marked seasonality and high spatial variability of protist communities in shallow freshwater systems
Marianne Simon et al.
ISME JOURNAL (2015)
Recent radiation in a marine and freshwater dinoflagellate species flock
Nataliia V. Annenkova et al.
ISME JOURNAL (2015)
Vertical Distribution of Functional Potential and Active Microbial Communities in Meromictic Lake Kivu
Ozgul Inceoglu et al.
MICROBIAL ECOLOGY (2015)
Evidence for an active rare biosphere within freshwater protists community
Didier Debroas et al.
MOLECULAR ECOLOGY (2015)
Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes
Alexandra Z. Worden et al.
SCIENCE (2015)
Eukaryotic plankton diversity in the sunlit ocean
Colomban de Vargas et al.
SCIENCE (2015)
Complex communities of small protists and unexpected occurrence of typical marine lineages in shallow freshwater systems
Marianne Simon et al.
ENVIRONMENTAL MICROBIOLOGY (2015)
Microbial abundance patterns along a transparency gradient suggest a weak coupling between heterotrophic bacteria and flagellates in eutrophic shallow Pampean lakes
Paulina Fermani et al.
HYDROBIOLOGIA (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Methanotrophy within the water column of a large meromictic tropical lake (Lake Kivu, East Africa)
C. Morana et al.
BIOGEOSCIENCES (2015)
High diversity of protistan plankton communities in remote high mountain lakes in the European Alps and the Himalayan mountains
Barbara Kammerlander et al.
FEMS MICROBIOLOGY ECOLOGY (2015)
Patterns of Rare and Abundant Marine Microbial Eukaryotes
Ramiro Logares et al.
CURRENT BIOLOGY (2014)
Protistan grazing in a meromictic freshwater lake with anoxic bottom water
Andreas Oikonomou et al.
FEMS MICROBIOLOGY ECOLOGY (2014)
Production of dissolved organic matter by phytoplankton and its uptake by heterotrophic prokaryotes in large tropical lakes
Cedric Morana et al.
LIMNOLOGY AND OCEANOGRAPHY (2014)
Decadal Trends and Common Dynamics of the Bio-Optical and Thermal Characteristics of the African Great Lakes
Steven Loiselle et al.
PLOS ONE (2014)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
The Protist Ribosomal Reference database (PR2): a catalog of unicellular eukaryote Small Sub-Unit rRNA sequences with curated taxonomy
Laure Guillou et al.
NUCLEIC ACIDS RESEARCH (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
Genetic diversity of planktonic eukaryotes in high mountain lakes (Central Pyrenees, Spain)
Xavier Triado-Margarit et al.
ENVIRONMENTAL MICROBIOLOGY (2012)
New paradigms in tropical limnology: the importance of the microbial food web
Hugo Sarmento
HYDROBIOLOGIA (2012)
Analysis of the community structure of abyssal kinetoplastids revealed similar communities at larger spatial scales
Faezeh Shah Salani et al.
ISME JOURNAL (2012)
Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing
Ramiro Logares et al.
ISME JOURNAL (2012)
Pyrosequencing analysis of the protist communities in a High Arctic meromictic lake: DNA preservation and change
Sophie Charvet et al.
FRONTIERS IN MICROBIOLOGY (2012)
Molecular characterisation of the small-eukaryote community in a tropical Great Lake (Lake Tanganyika, East Africa)
Anne-Laure Tarbe et al.
AQUATIC MICROBIAL ECOLOGY (2011)
UCHIME improves sensitivity and speed of chimera detection
Robert C. Edgar et al.
BIOINFORMATICS (2011)
Borders of Biodiversity: Life at the Edge of the World's Large Lakes
Yvonne Vadeboncoeur et al.
BIOSCIENCE (2011)
Chimeric 16S rRNA sequence formation and detection in Sanger and 454-pyrosequenced PCR amplicons
Brian J. Haas et al.
GENOME RESEARCH (2011)
Sequence diversity and novelty of natural assemblages of picoeukaryotes from the Indian Ocean
Ramon Massana et al.
ISME JOURNAL (2011)
Diffusive methane emissions to the atmosphere from Lake Kivu (Eastern Africa)
A. V. Borges et al.
JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES (2011)
Paleolimnological evidence of the effects of recent cultural eutrophication during the last 200 years in Lake Malawi, East Africa
Megan K. Otu et al.
JOURNAL OF GREAT LAKES RESEARCH (2011)
Protist Herbivory: a Key Pathway in the Pelagic Food Web of Lake Tanganyika
Anne-Laure Tarbe et al.
MICROBIAL ECOLOGY (2011)
Emerging Diversity within Chrysophytes, Choanoflagellates and Bicosoecids Based on Molecular Surveys
Javier del Campo et al.
PROTIST (2011)
Vertical Distribution of Ammonia-Oxidizing Crenarchaeota and Methanogens in the Epipelagic Waters of Lake Kivu (Rwanda-Democratic Republic of the Congo)
Marc Lliros et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Freshwater Perkinsea and marine-freshwater colonizations revealed by pyrosequencing and phylogeny of environmental rDNA
Jon Brate et al.
ISME JOURNAL (2010)
DNA BARCODING OF CHLORARACHNIOPHYTES USING NUCLEOMORPH ITS SEQUENCES1
Gillian H. Gile et al.
JOURNAL OF PHYCOLOGY (2010)
Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water
T. Stoeck et al.
MOLECULAR ECOLOGY (2010)
QIIME allows analysis of high-throughput community sequencing data
J. Gregory Caporaso et al.
NATURE METHODS (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
Photosynthetic picoplankton in Lake Tanganyika: biomass distribution patterns with depth, season and basin
Stephane Stenuite et al.
JOURNAL OF PLANKTON RESEARCH (2009)
Physical and biogeochemical limits to internal nutrient loading of meromictic Lake Kivu
Natacha Pasche et al.
LIMNOLOGY AND OCEANOGRAPHY (2009)
Genetic Diversity of Eukaryotic Plankton Assemblages in Eastern Tibetan Lakes Differing by their Salinity and Altitude
Qinglong L. Wu et al.
MICROBIAL ECOLOGY (2009)
The importance of dispersal related and local factors in shaping the taxonomic structure of diatom metacommunities
Elie Verleyen et al.
OIKOS (2009)
Molecular Phylogeny and Description of the Novel Katablepharid Roombia truncata gen. et sp nov., and Establishment of the Hacrobia Taxon nov
Noriko Okamoto et al.
PLOS ONE (2009)
Unexpected importance of potential parasites in the composition of the freshwater small-eukaryote community
Cecile Lepere et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2008)
Abundance and distribution of picoplankton in tropical, oligotrophic Lake Kivu, eastern Africa
Hugo Sarmento et al.
FRESHWATER BIOLOGY (2008)
Evaluating different approaches that test whether microbial communities have the same structure
Patrick D. Schloss
ISME JOURNAL (2008)
FactoMineR: An R package for multivariate analysis
Sebastien Le et al.
JOURNAL OF STATISTICAL SOFTWARE (2008)
Genetic diversity of eukaryotic microorganisms in Lake Taihu, a large shallow subtropical lake in China
Meijun Chen et al.
MICROBIAL ECOLOGY (2008)
Unveiling fungal zooflagellates as members of freshwater picoeukaryotes: evidence from a molecular diversity study in a deep meromictic lake
Emilie Lefevre et al.
ENVIRONMENTAL MICROBIOLOGY (2007)
Eukaryotic microbes, species recognition and the geographic limits of species: examples from the kingdom Fungi
John W. Taylor et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2006)
Phytoplankton ecology of Lake Kivu (eastern Africa)
Hugo Sarmento et al.
JOURNAL OF PLANKTON RESEARCH (2006)
Genetic diversity of small eukaryotes in lakes differing by their trophic status
M Lefranc et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
Weak mixing in Lake Kivu:: New insights indicate increasing risk of uncontrolled gas eruption -: art. no. Q07009
M Schmid et al.
GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS (2005)
Abundance and biomass of heterotrophic microorganisms in Lake Tanganyika
S Pirlot et al.
FRESHWATER BIOLOGY (2005)
Development of a real-time PCR assay for rapid detection and quantification of Alexandrium minutum (a dinoflagellate)
L Galluzzi et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Phylogenetic and ecological analysis of novel marine stramenopiles
R Massana et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2004)
Environmental assessment of the East African Rift Valley lakes
EO Odada et al.
AQUATIC SCIENCES (2003)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)
Changes in archaeal, bacterial and eukaryal assemblages along a salinity gradient by comparison of genetic fingerprinting methods in a multipond solar saltern
EO Casamayor et al.
ENVIRONMENTAL MICROBIOLOGY (2002)
Bacterivory by heterotrophic flagellates: community structure and feeding strategies
J Boenigk et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2002)