4.1 Article

An optimized, amplicon-based approach for sequencing of SARS-CoV-2 from patient samples using COVIDSeq assay on Illumina MiSeq sequencing platforms

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

High throughput detection and genetic epidemiology of SARS-CoV-2 using COVIDSeq next-generation sequencing

Rahul C. Bhoyar et al.

Summary: The study utilized the COVIDSeq protocol for high-throughput detection of SARS-CoV-2, showing high concordance with RT-PCR and potential as a confirmatory test. It also provided insights into the genetic epidemiology of SARS-CoV-2 samples, identifying several new variants.

PLOS ONE (2021)

Article Biology

Computational Analysis and Phylogenetic Clustering of SARS-CoV-2 Genomes

Bani Jolly et al.

Summary: COVID-19, originating as a local outbreak in Hubei province, China, has now become a global pandemic posing a major threat to healthcare systems worldwide. Efforts have been made to generate genome sequence data for the virus, enabling in-depth analysis and understanding of the disease, its origin, and its epidemiology. Systematic phylogenetic analysis is a powerful tool for tracking virus transmission patterns and identifying potential interventions.

BIO-PROTOCOL (2021)

Article Microbiology

A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology

Andrew Rambaut et al.

NATURE MICROBIOLOGY (2020)

Article Biochemical Research Methods

Nextstrain: real-time tracking of pathogen evolution

James Hadfield et al.

BIOINFORMATICS (2018)