4.5 Review

Knowledge gaps in the assessment of antimicrobial resistance in surface waters

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Environmental Sciences

Selection of antibiotic resistance by metals in a riverine bacterial community

Isabel Silva et al.

Summary: This study investigated the role of copper and zinc in the selection of antibiotic resistant bacteria and genes in a riverine bacterial community. Results showed that metal exposure led to the prevalence of bacteria intrinsically resistant to antibiotics, suggesting the importance of cross-resistance mechanisms in antibiotic resistance selection.

CHEMOSPHERE (2021)

Article Environmental Sciences

Metagenomic exploration of antibiotic resistome in treated wastewater effluents and their receiving water

Shahbaz Raza et al.

Summary: The study investigated the impact of urban wastewater treatment plant effluents on receiving water in terms of resistomes and mobilomes. The effluent samples showed the highest abundance and diversity of ARGs, including clinically important ones, while upstream water samples did not. Plasmid-mediated ARGs were most abundant in effluent samples, suggesting a higher transmissibility in downstream environments.

SCIENCE OF THE TOTAL ENVIRONMENT (2021)

Article Environmental Sciences

Heavy metal pollution promotes antibiotic resistance potential in the aquatic environment

Majid Komijani et al.

Summary: The study identified a strong correlation between waste discharge, heavy metal concentration, and the abundance of ARGs in lakes, with heavy metals showing a stronger impact than antibiotics. Global lake data also confirmed that overuse of antibiotics and discharge of heavy metals are increasing the distribution of ARGs.

ENVIRONMENTAL POLLUTION (2021)

Article Environmental Sciences

Ecological insights into the elevational biogeography of antibiotic resistance genes in a pristine river: Metagenomic analysis along the Yarlung Tsangpo River on the Tibetan Plateau

Sheng Liu et al.

Summary: This study analyzed the biogeographical pattern of ARGs along the pristine Yarlung Tsangpo River on the Tibetan Plateau using metagenomics approaches, revealing the distribution characteristics of ARGs at different elevations. The study found that bacA, resistant to bacitracin, dominated the ARGs in the pristine river, and elevational gradients could influence the assembly processes of ARGs.

ENVIRONMENTAL POLLUTION (2021)

Review Environmental Sciences

Distribution of antibiotic resistance genes in the environment☆

Mei Zhuang et al.

Summary: The presence of antibiotic resistant bacteria (ARB) and antibiotic resistance genes (ARGs) in the microbiome poses a significant global public health concern. Different habitats are at risk due to excessive antibiotic use and evolutionary changes in the resistome. China leads in the number of papers related to ARGs compared to other countries, with varied distributions of ARG subtypes across different environments.

ENVIRONMENTAL POLLUTION (2021)

Article Engineering, Environmental

Dawning of a new ERA: Environmental Risk Assessment of antibiotics and their potential to select for antimicrobial resistance

Aimee K. Murray et al.

Summary: Antibiotics and antimicrobials are widely used, misused and overused in human and veterinary medicine, animal husbandry and aquaculture, potentially leading to the enrichment of antimicrobial resistant bacteria in the environment. There is a need to develop a new methodology for environmental risk assessment to ensure that diffuse and point source discharges are safe choices.

WATER RESEARCH (2021)

Review Microbiology

Interactions Between Microplastics and Heavy Metals in Aquatic Environments: A Review

Sitong Liu et al.

Summary: This review examines the interactions between microplastics and heavy metals, highlighting the crucial role of microorganisms in these interactions and discussing the potential hazards to human health. It suggests future research directions to uncover action mechanisms and mitigate the risks associated with the presence of microplastics.

FRONTIERS IN MICROBIOLOGY (2021)

Article Engineering, Environmental

Anthropogenic disturbances on antibiotic resistome along the Yarlung Tsangpo River on the Tibetan Plateau: Ecological dissemination mechanisms of antibiotic resistance genes to bacterial pathogens

Sheng Liu et al.

Summary: Human activities accelerate the prevalence of the antibiotic resistome and pose threats to ecological safety and public health globally. The biogeography of antibiotic resistance genes (ARGs) and pathogenic antibiotic resistant bacteria (PARB) under anthropogenic disturbances along the Yarlung Tsangpo River was studied using a metagenomic approach. Human activities significantly promote the dissemination of ARGs and PARB along the river, with land use pattern identified as a key factor influencing ARG composition.

WATER RESEARCH (2021)

Article Biochemical Research Methods

Biodegradation of antibiotics: The new resistance determinants - part II

Ana C. Reis et al.

NEW BIOTECHNOLOGY (2020)

Review Environmental Sciences

Platforms for elucidating antibiotic resistance in single genomes and complex metagenomes

Chhedi Lal Gupta et al.

ENVIRONMENT INTERNATIONAL (2020)

Article Environmental Sciences

Heavy metal copper accelerates the conjugative transfer of antibiotic resistance genes in freshwater microcosms

Qing Wang et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2020)

Article Engineering, Environmental

Effect-Based Identification of Hazardous Antibiotic Transformation Products after Water Chlorination

Adrian Jaen-Gil et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2020)

Article Environmental Sciences

Plastics in the marine environment are reservoirs for antibiotic and metal resistance genes

Yuyi Yang et al.

ENVIRONMENT INTERNATIONAL (2019)

Review Pathology

How to discover new antibiotic resistance genes?

Linda Hadjadj et al.

EXPERT REVIEW OF MOLECULAR DIAGNOSTICS (2019)

Article Environmental Sciences

Micro(nano)plastics: Unignorable vectors for organisms

Maocai Shen et al.

MARINE POLLUTION BULLETIN (2019)

Article Multidisciplinary Sciences

Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage

Rene S. Hendriksen et al.

NATURE COMMUNICATIONS (2019)

Article Environmental Sciences

Does nano silver promote the selection of antibiotic resistance genes in soil and plant?

Qing-Lin Chen et al.

ENVIRONMENT INTERNATIONAL (2019)

Review Engineering, Environmental

Association between heavy metals and antibiotic-resistant human pathogens in environmental reservoirs: A review

Christine C. Nguyen et al.

FRONTIERS OF ENVIRONMENTAL SCIENCE & ENGINEERING (2019)

Review Microbiology

Antibiotic Pollution in the Environment: From Microbial Ecology to Public Policy

Susanne A. Kraemer et al.

MICROORGANISMS (2019)

Article Environmental Sciences

A conceptual framework for the environmental surveillance of antibiotics and antibiotic resistance

Patricia M. C. Huijbers et al.

ENVIRONMENT INTERNATIONAL (2019)

Article Environmental Sciences

Heavy metal pollution and co-selection for antibiotic resistance: A microbial palaeontology approach

A. W. Dickinson et al.

ENVIRONMENT INTERNATIONAL (2019)

Review Infectious Diseases

Antifungal Resistance: a Concerning Trend for the Present and Future

Joshua A. Hendrickson et al.

CURRENT INFECTIOUS DISEASE REPORTS (2019)

Article Environmental Sciences

High prevalence of colistin resistance genes in German municipal wastewater

David Kneis et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2019)

Article Engineering, Environmental

Cell-free DNA: A Neglected Source for Antibiotic Resistance Genes Spreading from WWTPs

Yan Zhang et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2018)

Article Biotechnology & Applied Microbiology

Comparison of normalization methods for the analysis of metagenomic gene abundance data

Mariana Buongermino Pereira et al.

BMC GENOMICS (2018)

Review Environmental Sciences

Antibiotics and antibiotic resistance genes in global lakes: A review and meta-analysis

Yuyi Yang et al.

ENVIRONMENT INTERNATIONAL (2018)

Review Environmental Sciences

Critical knowledge gaps and research needs related to the environmental dimensions of antibiotic resistance

D. G. Joakim Larsson et al.

ENVIRONMENT INTERNATIONAL (2018)

Article Engineering, Environmental

Antibiotic distribution, risk assessment, and microbial diversity in river water and sediment in Hong Kong

Wen-Jing Deng et al.

ENVIRONMENTAL GEOCHEMISTRY AND HEALTH (2018)

Article Environmental Sciences

Adsorption of antibiotics on microplastics

Jia Li et al.

ENVIRONMENTAL POLLUTION (2018)

Article Environmental Sciences

Microplastics increase impact of treated wastewater on freshwater microbial community

Ester M. Eckert et al.

ENVIRONMENTAL POLLUTION (2018)

Article Environmental Sciences

Prevalence of antibiotic resistance genes from effluent of coastal aquaculture, South Korea

Hyun Min Jang et al.

ENVIRONMENTAL POLLUTION (2018)

Article Environmental Sciences

Microplastic pollution increases gene exchange in aquatic ecosystems

Maria Arias-Andres et al.

ENVIRONMENTAL POLLUTION (2018)

Review Infectious Diseases

Antimicrobial resistance in aquaculture: Current knowledge and alternatives to tackle the problem

Lucia Santos et al.

INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS (2018)

Article Environmental Sciences

Arctic antibiotic resistance gene contamination, a result of anthropogenic activities and natural origin

Lu Tan et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2018)

Article Environmental Sciences

Emergence of mcr-1 plasmid-mediated colistin-resistant Escherichia coli isolates from seawater

Rezak Drali et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2018)

Article Engineering, Environmental

Biofilms as a sink for antibiotic resistance genes (ARGs) in the Yangtze Estuary

Xing-pan Guo et al.

WATER RESEARCH (2018)

Article Multidisciplinary Sciences

The global distribution and spread of the mobilized colistin resistance gene mcr-1

Ruobing Wang et al.

NATURE COMMUNICATIONS (2018)

Article Microbiology

In-depth resistome analysis by targeted metagenomics

Val F. Lanza et al.

MICROBIOME (2018)

Review Environmental Sciences

Nanoparticles in the environment: where do we come from, where do we go to?

Mirco Bundschuh et al.

ENVIRONMENTAL SCIENCES EUROPE (2018)

Article Microbiology

Environmental dimensions of antibiotic resistance: assessment of basic science gaps

Kornelia Smalla et al.

FEMS MICROBIOLOGY ECOLOGY (2018)

Article Environmental Sciences

PAHs accelerate the propagation of antibiotic resistance genes in coastal water microbial community

Jing Wang et al.

ENVIRONMENTAL POLLUTION (2017)

Article Infectious Diseases

Quinolone-resistant gyrase mutants demonstrate decreased susceptibility to triclosan

Mark A. Webber et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2017)

Article Environmental Sciences

Mechanisms of antibiotic resistance in bacteria mediated by silver nanoparticles

Chitrada Kaweeteerawat et al.

JOURNAL OF TOXICOLOGY AND ENVIRONMENTAL HEALTH-PART A-CURRENT ISSUES (2017)

Review Biochemistry & Molecular Biology

At the Nexus of Antibiotics and Metals: The Impact of Cu and Zn on Antibiotic Activity and Resistance

Keith Poole

TRENDS IN MICROBIOLOGY (2017)

Article Engineering, Environmental

Untreated urban waste contaminates Indian river sediments with resistance genes to last resort antibiotics

Nachiket P. Marathe et al.

WATER RESEARCH (2017)

Article Biotechnology & Applied Microbiology

Comparative metagenomics reveals insights into the deep-sea adaptation mechanism of the microorganisms in Iheya hydrothermal fields

Hai-Liang Wang et al.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2017)

Article Multidisciplinary Sciences

Dissemination of antibiotic resistance genes from antibiotic producers to pathogens

Xinglin Jiang et al.

NATURE COMMUNICATIONS (2017)

Review Genetics & Heredity

The Complex Relationship between Virulence and Antibiotic Resistance

Meredith Schroeder et al.

Review Microbiology

Chemical ecology of antibiotic production by actinomycetes

Anne Van der Meij et al.

FEMS MICROBIOLOGY REVIEWS (2017)

Article Environmental Sciences

Concentrations of antibiotics predicted to select for resistant bacteria: Proposed limits for environmental regulation

Johan Bengtsson-Palme et al.

ENVIRONMENT INTERNATIONAL (2016)

Article Engineering, Environmental

Metagenomic Analysis Revealing Antibiotic Resistance Genes (ARGs) and Their Genetic Compartments in the Tibetan Environment

Baowei Chen et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2016)

Article Environmental Sciences

Environmental and human health risks of antimicrobials used in Fenneropenaeus chinensis aquaculture production in China

Ming Sun et al.

ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH (2016)

Article Genetics & Heredity

Metagenomics as a preliminary screen for antimicrobial bioprospecting

Soha Al-Amoudi et al.

Article Biochemistry & Molecular Biology

Antimicrobial Resistance Profile of Planktonic and Biofilm Cells of Staphylococcus aureus and Coagulase-Negative Staphylococci

Adilson de Oliveira et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2016)

Article Environmental Sciences

Molecular Methods for Assessment of Antibiotic Resistance in Agricultural Ecosystems: Prospects and Challenges

Elizabeth Luby et al.

JOURNAL OF ENVIRONMENTAL QUALITY (2016)

Article Environmental Sciences

Minimal selective concentrations of tetracycline in complex aquatic bacterial biofilms

Sara V. Lundstrom et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2016)

Article Biotechnology & Applied Microbiology

Plasmid transfer in biofilms: a perspective on limitations and opportunities

Thibault Stalder et al.

NPJ BIOFILMS AND MICROBIOMES (2016)

Article Microbiology

Virome-associated antibiotic-resistance genes in an experimental aquaculture facility

Stefano Colombo et al.

FEMS MICROBIOLOGY ECOLOGY (2016)

Article Biochemical Research Methods

Systematic suspect screening and identification of sulfonamide antibiotic transformation products in the aquatic environment

Marius Majewsky et al.

ANALYTICAL AND BIOANALYTICAL CHEMISTRY (2015)

Article Biotechnology & Applied Microbiology

The Ocean as a Global Reservoir of Antibiotic Resistance Genes

Stephen M. Hatosy et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)

Article Biochemistry & Molecular Biology

Combined Toxic Effects of Heavy Metals and Antibiotics on a Pseudomonas fluorescens Strain ZY2 Isolated from Swine Wastewater

Yan Zhou et al.

INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2015)

Article Ecology

Validated predictive modelling of the environmental resistome

Gregory C. A. Amos et al.

ISME JOURNAL (2015)

Article Infectious Diseases

Silver resistance in Gram-negative bacteria: a dissection of endogenous and exogenous mechanisms

Christopher P. Randall et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2015)

Review Infectious Diseases

Framework for optimisation of the clinical use of colistin and polymyxin B: the Prato polymyxin consensus

Roger L. Nation et al.

LANCET INFECTIOUS DISEASES (2015)

Review Microbiology

Tackling antibiotic resistance: the environmental framework

Thomas U. Berendonk et al.

NATURE REVIEWS MICROBIOLOGY (2015)

Article Microbiology

Current and future resources for functional metagenomics

Kathy N. Lam et al.

FRONTIERS IN MICROBIOLOGY (2015)

Review Microbiology

The impact of triclosan on the spread of antibiotic resistance in the environment

Daniel E. Carey et al.

FRONTIERS IN MICROBIOLOGY (2015)

Review Microbiology

The role of biofilms as environmental reservoirs of antibiotic resistance

Jose L. Balcazar et al.

FRONTIERS IN MICROBIOLOGY (2015)

Article Environmental Sciences

Concentration and distribution of antibiotics in water-sediment system of Bosten Lake, Xinjiang

Xiaoning Lei et al.

ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH (2015)

Review Infectious Diseases

Antimicrobial susceptibility testing in biofilm-growing bacteria

M. D. Macia et al.

CLINICAL MICROBIOLOGY AND INFECTION (2014)

Editorial Material Biochemistry & Molecular Biology

Antibiotic resistance and the environment-there and back again

Silvia Berkner et al.

EMBO REPORTS (2014)

Article Multidisciplinary Sciences

Bloom of resident antibiotic-resistant bacteria in soil following manure fertilization

Nikolina Udikovic-Kolic et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Article Engineering, Environmental

Metagenomic Profiles of Antibiotic Resistance Genes (ARGs) between Human Impacted Estuary and Deep Ocean Sediments

Baowei Chen et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2013)

Review Microbiology

Intrinsic antibiotic resistance: Mechanisms, origins, challenges and solutions

Georgina Cox et al.

INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2013)

Review Microbiology

Antimicrobial activity of metals: mechanisms, molecular targets and applications

Joseph A. Lemire et al.

NATURE REVIEWS MICROBIOLOGY (2013)

Review Microbiology

Context matters - the complex interplay between resistome genotypes and resistance phenotypes

Gautam Dantas et al.

CURRENT OPINION IN MICROBIOLOGY (2012)

Review Pharmacology & Pharmacy

Evolution of antibiotic resistance at non-lethal drug concentrations

Dan I. Andersson et al.

DRUG RESISTANCE UPDATES (2012)

Article Environmental Sciences

Occurrence and risks of antibiotics in the Laizhou Bay, China: Impacts of river discharge

Ruijie Zhang et al.

ECOTOXICOLOGY AND ENVIRONMENTAL SAFETY (2012)

Article Engineering, Environmental

Correlation Between Upstream Human Activities and Riverine Antibiotic Resistance Genes

Amy Pruden et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2012)

Review Immunology

The interconnection between biofilm formation and horizontal gene transfer

Jonas Stenlokke Madsen et al.

FEMS IMMUNOLOGY AND MEDICAL MICROBIOLOGY (2012)

Article Multidisciplinary Sciences

Class 1 Integrons in Environments with Different Degrees of Urbanization

Maximiliano Nardelli et al.

PLOS ONE (2012)

Article Multidisciplinary Sciences

Salmon Aquaculture and Antimicrobial Resistance in the Marine Environment

Alejandro H. Buschmann et al.

PLOS ONE (2012)

Article Microbiology

Nitric Oxide Protects Bacteria from Aminoglycosides by Blocking the Energy-Dependent Phases of Drug Uptake

Bruce D. McCollister et al.

ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2011)

Review Microbiology

Antibiotic resistance gene spread due to manure application on agricultural fields

Holger Heuer et al.

CURRENT OPINION IN MICROBIOLOGY (2011)

Article Engineering, Environmental

Temporal Dynamics of Periphyton Exposed to Tetracycline in Stream Mesocosms

Erin L. Quinlan et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2011)

Review Engineering, Biomedical

Antibiotic-induced biofilm formation

Jeffrey B. Kaplan

INTERNATIONAL JOURNAL OF ARTIFICIAL ORGANS (2011)

Article Multidisciplinary Sciences

Antibiotic resistance is ancient

Vanessa M. D'Costa et al.

NATURE (2011)

Article Environmental Sciences

Sorption and desorption of antibiotic tetracycline on marine sediments

Xiang-Rong Xu et al.

CHEMOSPHERE (2010)

Review Microbiology

Call of the wild: antibiotic resistance genes in natural environments

Heather K. Allen et al.

NATURE REVIEWS MICROBIOLOGY (2010)

Article Engineering, Environmental

Antimicrobial resistance of fecal indicators in municipal wastewater treatment plant

A. Luczkiewicz et al.

WATER RESEARCH (2010)

Review Biotechnology & Applied Microbiology

Antibiotic resistance genes in water environment

Xu-Xiang Zhang et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2009)

Review Environmental Sciences

Antibiotics in the aquatic environment - A review - Part I

Klaus Kuemmerer

CHEMOSPHERE (2009)

Article Environmental Sciences

Wastewater treatment contributes to selective increase of antibiotic resistance among Acinetobacter spp.

Yongli Zhang et al.

SCIENCE OF THE TOTAL ENVIRONMENT (2009)

Review Biochemical Research Methods

Antibiotics and antibiotic resistance in water environments

Fernando Baquero et al.

CURRENT OPINION IN BIOTECHNOLOGY (2008)

Review Infectious Diseases

Antibiotic resistance in the absence of antimicrobial use: mechanisms and implications

Lucia Pallecchi et al.

EXPERT REVIEW OF ANTI-INFECTIVE THERAPY (2008)

Article Chemistry, Analytical

Identification and determination of metabolites and degradation products of sulfonamide antibiotics

M. Jesus Garcia-Galan et al.

TRAC-TRENDS IN ANALYTICAL CHEMISTRY (2008)

Article Immunology

Microbial Adaptation Putting the Best Team on the Field

Shiv Patel et al.

INFECTIOUS DISEASES IN CLINICAL PRACTICE (2007)

Article Microbiology

Antimicrobial resistance patterns in Enterobacteriaceae isolated from an urban wastewater treatment plant

Miguel Ferreira da Silva et al.

FEMS MICROBIOLOGY ECOLOGY (2007)

Review Infectious Diseases

The emergence of antibiotic resistance by mutation

N. Woodford et al.

CLINICAL MICROBIOLOGY AND INFECTION (2007)

Article Microbiology

Bacterial tolerances to metals and antibiotics in metal-contaminated and reference streams

Meredith S. Wright et al.

FEMS MICROBIOLOGY ECOLOGY (2006)

Article Microbiology

Coselection for microbial resistance to metals and antibiotics in freshwater microcosms

Ramunas Stepanauskas et al.

ENVIRONMENTAL MICROBIOLOGY (2006)

Review Microbiology

Integrons: agents of bacterial evolution

Didier Mazel

NATURE REVIEWS MICROBIOLOGY (2006)

Article Multidisciplinary Sciences

Aminoglycoside antibiotics induce bacterial biofilm formation

LR Hoffman et al.

NATURE (2005)

Article Infectious Diseases

Resistance integrons and super-integrons

AC Fluit et al.

CLINICAL MICROBIOLOGY AND INFECTION (2004)

Article Marine & Freshwater Biology

Potential drug (oxytetracycline and oxolinic acid) pollution from Mediterranean sparid fish farms

G Rigos et al.

AQUATIC TOXICOLOGY (2004)

Article Microbiology

Mechanisms of antibiotic resistance in bacterial biofilms

PS Stewart

INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2002)

Article Environmental Sciences

Biodegradability properties of sulfonamides in activated sludge

F Ingerslev et al.

ENVIRONMENTAL TOXICOLOGY AND CHEMISTRY (2000)