相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。The Dynamic SecYEG Translocon
Julia Oswald et al.
FRONTIERS IN MOLECULAR BIOSCIENCES (2021)
Mini Review: Bacterial Membrane Composition and Its Modulation in Response to Stress
Jessica R. Willdigg et al.
FRONTIERS IN MOLECULAR BIOSCIENCES (2021)
Enthalpy-Entropy Compensation in Biomolecular Recognition: A Computational Perspective
Francesca Peccati et al.
ACS OMEGA (2021)
Scalable molecular dynamics on CPU and GPU architectures with NAMD
James C. Phillips et al.
JOURNAL OF CHEMICAL PHYSICS (2020)
Structural Relaxation Processes and Collective Dynamics of Water in Biomolecular Environments
Sara Capponi et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2019)
A molecular dynamics study on the resilience of Sec61 channel from open to closed state
Sujuan Sun et al.
RSC ADVANCES (2019)
Driving Forces of Translocation Through Bacterial Translocon SecYEG
Denis G. Knyazev et al.
JOURNAL OF MEMBRANE BIOLOGY (2018)
The Molecular Origin of Enthalpy/Entropy Compensation in Biomolecular Recognition
Jerome M. Fox et al.
ANNUAL REVIEW OF BIOPHYSICS, VOL 47 (2018)
CHARMM-GUI Input Generator for NAMD, GROMACS, AMBER, OpenMM, and CHARMM/OpenMM Simulations Using the CHARMM36 Additive Force Field
Jumin Lee et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2016)
Crystal structure of a substrate-engaged SecY protein-translocation channel
Long Li et al.
NATURE (2016)
Anomalous behavior of water inside the SecY translocon
Sara Capponi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Crystal Structures of SecYEG in Lipidic Cubic Phase Elucidate a Precise Resting and a Peptide-Bound State
Yoshiki Tanaka et al.
CELL REPORTS (2015)
Ion Conductivity of the Bacterial Translocation Channel SecYEG Engaged in Translocation
Denis G. Knyazev et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
Convergence and error estimation in free energy calculations using the weighted histogram analysis method
Fangqiang Zhu et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2012)
Preserving the membrane barrier for small molecules during bacterial protein translocation
Eunyong Park et al.
NATURE (2011)
Water in Cavity-Ligand Recognition
Riccardo Baron et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
Hydrophobically stabilized open state for the lateral gate of the Sec translocon
Bin Zhang et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Software news and updates - CHARNIM-GUI: A web-based grraphical user interface for CHARMM
Sunhwan Jo et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2008)
The Roles of Pore Ring and Plug in the SecY Protein-conducting Channel
James Gumbart et al.
JOURNAL OF GENERAL PHYSIOLOGY (2008)
Structural determinants of lateral gate opening in the protein translocon
James Gumbart et al.
BIOCHEMISTRY (2007)
The plug domain of the SecY protein stabilizes the closed state of the translocation channel and maintains a membrane seal
Weikai Li et al.
MOLECULAR CELL (2007)
Determining the conductance of the SecY protein translocation channel for small molecules
Sapar M. Saparov et al.
MOLECULAR CELL (2007)
Size, motion, and function of the SecY translocon revealed by molecular dynamics simulations with virtual probes
P Tian et al.
BIOPHYSICAL JOURNAL (2006)
Molecular dynamics studies of the archaeal translocon
J Gumbart et al.
BIOPHYSICAL JOURNAL (2006)
X-ray structure of a protein-conducting channel
B van den Berg et al.
NATURE (2004)
Empirical force fields for biological macromolecules: Overview and issues
AD Mackerell
JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)
Free energy calculation from steered molecular dynamics simulations using Jarzynski's equality
S Park et al.
JOURNAL OF CHEMICAL PHYSICS (2003)
分享论文
