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Mariam Jamal-Hanjani et al.
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Christopher T. Brown et al.
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Anja Spang et al.
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Joel Ackelsberg et al.
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Anthony Rhoads et al.
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Cristiane C. Thompson et al.
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poRe: an R package for the visualization and analysis of nanopore sequencing data
Mick Watson et al.
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Genomics Virtual Laboratory: A Practical Bioinformatics Workbench for the Cloud
Enis Afgan et al.
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Joshua Quick et al.
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N. Stoesser et al.
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Phi-Vu Nguyen et al.
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Poretools: a toolkit for analyzing nanopore sequence data
Nicholas J. Loman et al.
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Susannah J. Salter et al.
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Johannes Alneberg et al.
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D. Ewen Cameron et al.
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Vivien G. Dugan et al.
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Eric A. Franzosa et al.
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Claudio U. Koeser et al.
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Emma L. Doughty et al.
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Nathan S. Watson-Haigh et al.
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Allegra Via et al.
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LJ Forney et al.
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