相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Metagenomic analysis of a high carbon dioxide subsurface microbial community populated by chemolithoautotrophs and bacteria and archaea from candidate phyla
Joanne B. Emerson et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Aquifer environment selects for microbial species cohorts in sediment and groundwater
Laura A. Hug et al.
ISME JOURNAL (2015)
Unusual biology across a group comprising more than 15% of domain Bacteria
Christopher T. Brown et al.
NATURE (2015)
Diverse uncultivated ultra-small bacterial cells in groundwater
Birgit Luef et al.
NATURE COMMUNICATIONS (2015)
Rfam 12.0: updates to the RNA families database
Eric P. Nawrocki et al.
NUCLEIC ACIDS RESEARCH (2015)
InterProScan 5: genome-scale protein function classification
Philip Jones et al.
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Relative Amino Acid Composition Signatures of Organisms and Environments
Alexandra Moura et al.
PLOS ONE (2013)
Small Genomes and Sparse Metabolisms of Sediment-Associated Bacteria from Four Candidate Phyla
Rose S. Kantor et al.
MBIO (2013)
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
Yu Peng et al.
BIOINFORMATICS (2012)
Geneious Basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
Matthew Kearse et al.
BIOINFORMATICS (2012)
Lipoproteins in bacteria: structures and biosynthetic pathways
Hiroshi Nakayama et al.
FEBS JOURNAL (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Fermentation, Hydrogen, and Sulfur Metabolism in Multiple Uncultivated Bacterial Phyla
Kelly C. Wrighton et al.
SCIENCE (2012)
Acetate Availability and its Influence on Sustainable Bioremediation of Uranium-Contaminated Groundwater
Kenneth H. Williams et al.
GEOMICROBIOLOGY JOURNAL (2011)
Origins and Early Evolution of the Mevalonate Pathway of Isoprenoid Biosynthesis in the Three Domains of Life
Jonathan Lombard et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes
Nancy Y. Yu et al.
BIOINFORMATICS (2010)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Prodigal: prokaryotic gene recognition and translation initiation site identification
Doug Hyatt et al.
BMC BIOINFORMATICS (2010)
Community-wide analysis of microbial genome sequence signatures
Gregory J. Dick et al.
GENOME BIOLOGY (2009)
Graph clustering via a discrete uncoupling process
Stijn Van Dongen
SIAM JOURNAL ON MATRIX ANALYSIS AND APPLICATIONS (2008)
SILVA:: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB
Elmar Pruesse et al.
NUCLEIC ACIDS RESEARCH (2007)
UniRef: comprehensive and non-redundant UniProt reference clusters
Baris E. Suzek et al.
BIOINFORMATICS (2007)
Prediction of effective genome size in metagenomic samples
Jeroen Raes et al.
GENOME BIOLOGY (2007)
Folate cross-feeding supports symbiotic homoacetogenic spirochetes
JR Graber et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
Sortase-catalysed anchoring of surface proteins to the cell wall of Staphylococcus aureus
SK Mazmanian et al.
MOLECULAR MICROBIOLOGY (2001)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)
分享论文
