4.3 Article

Identifying patterns in amyotrophic lateral sclerosis progression from sparse longitudinal data

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NATURE COMPUTATIONAL SCIENCE
卷 2, 期 9, 页码 605-+

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SPRINGERNATURE
DOI: 10.1038/s43588-022-00299-w

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资金

  1. Department of Veterans Affairs of Research and Development [IK2CX001595-02]
  2. Department of Defense [AL200156]
  3. NSF Gradate Research Fellowship Program (GRFP)
  4. Siebel Scholars Fellowship
  5. Answer ALS
  6. United States Army Medical Research Acquisition Activity [W81XWH-21-1-0245]
  7. NIH [U54NS091046]
  8. NIH/NINDS [K23NS099380]
  9. MIT-IBM Watson AI Lab [W1771646]
  10. Muscular Dystrophy Association

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This study developed an approach based on a mixture of Gaussian processes to identify patterns of disease progression in patients with ALS. The results showed that ALS progression is often nonlinear and can involve periods of stable disease followed by rapid decline. The approach can also be applied to Alzheimer's and Parkinson's diseases.
The clinical presentation of amyotrophic lateral sclerosis (ALS), a fatal neurodegenerative disease, varies widely across patients, making it challenging to determine if potential therapeutics slow progression. We sought to determine whether there were common patterns of disease progression that could aid in the design and analysis of clinical trials. We developed an approach based on a mixture of Gaussian processes to identify clusters of patients sharing similar disease progression patterns, modeling their average trajectories and the variability in each cluster. We show that ALS progression is frequently nonlinear, with periods of stable disease preceded or followed by rapid decline. We also show that our approach can be extended to Alzheimer's and Parkinson's diseases. Our results advance the characterization of disease progression of ALS and provide a flexible modeling approach that can be applied to other progressive diseases.

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