4.6 Article

A Phylogenomic Analysis of the Bacterial Phylum Fibrobacteres

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Donovan H. Parks et al.

GENOME RESEARCH (2015)

Article Biotechnology & Applied Microbiology

Classifying the bacterial gut microbiota of termites and cockroaches: A curated phylogenetic reference database (DictDb)

Aram Mikaelyan et al.

SYSTEMATIC AND APPLIED MICROBIOLOGY (2015)

Article Biochemical Research Methods

Prokka: rapid prokaryotic genome annotation

Torsten Seemann

BIOINFORMATICS (2014)

Article Biochemical Research Methods

STAMP: statistical analysis of taxonomic and functional profiles

Donovan H. Parks et al.

BIOINFORMATICS (2014)

Article Biochemical Research Methods

InterProScan 5: genome-scale protein function classification

Philip Jones et al.

BIOINFORMATICS (2014)

Review Biochemical Research Methods

Genomics of cellulolytic bacteria

Daniela E. Koeck et al.

CURRENT OPINION IN BIOTECHNOLOGY (2014)

Article Evolutionary Biology

An Expanded Genomic Representation of the Phylum Cyanobacteria

Rochelle M. Soo et al.

GENOME BIOLOGY AND EVOLUTION (2014)

Review Microbiology

Symbiotic digestion of lignocellulose in termite guts

Andreas Brune

NATURE REVIEWS MICROBIOLOGY (2014)

Article Biochemistry & Molecular Biology

The carbohydrate-active enzymes database (CAZy) in 2013

Vincent Lombard et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biochemistry & Molecular Biology

IMG/M 4 version of the integrated metagenome comparative analysis system

Victor M. Markowitz et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biology

Metabolomic profiling of 13C-labelled cellulose digestion in a lower termite: insights into gut symbiont function

Gaku Tokuda et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2014)

Article Biotechnology & Applied Microbiology

Distribution and diversity of members of the bacterial phylum Fibrobacteres in environments where cellulose degradation occurs

Emma Ransom-Jones et al.

SYSTEMATIC AND APPLIED MICROBIOLOGY (2014)

Article Multidisciplinary Sciences

GroopM: an automated tool for the recovery of population genomes from related metagenomes

Michael Imelfort et al.

Article Biotechnology & Applied Microbiology

Phylogenetic Distribution of Potential Cellulases in Bacteria

Renaud Berlemont et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biotechnology & Applied Microbiology

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

Mads Albertsen et al.

NATURE BIOTECHNOLOGY (2013)

Article Biochemistry & Molecular Biology

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Biotechnology & Applied Microbiology

A phylogenetic analysis of the phylum Fibrobacteres

Kelsea A. Jewell et al.

SYSTEMATIC AND APPLIED MICROBIOLOGY (2013)

Review Microbiology

Bacterial chitin degradation-mechanisms and ecophysiological strategies

Sara Beier et al.

FRONTIERS IN MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

Bacterial chitin utilisation at extremely haloalkaline conditions

D. Y. Sorokin et al.

EXTREMOPHILES (2012)

Review Ecology

The Fibrobacteres: an Important Phylum of Cellulose-Degrading Bacteria

Emma Ransom-Jones et al.

MICROBIAL ECOLOGY (2012)

Review Microbiology

Type IV Pilin Proteins: Versatile Molecular Modules

Carmen L. Giltner et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2012)

Article Biochemistry & Molecular Biology

dbCAN: a web resource for automated carbohydrate-active enzyme annotation

Yanbin Yin et al.

NUCLEIC ACIDS RESEARCH (2012)

Article Multidisciplinary Sciences

Metagenomic Insights into the Fibrolytic Microbiome in Yak Rumen

Xin Dai et al.

PLOS ONE (2012)

Review Biochemistry & Molecular Biology

The cytochrome bd respiratory oxygen reductases

Vitaliy B. Borisov et al.

BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS (2011)

Letter Biochemical Research Methods

SignalP 4.0: discriminating signal peptides from transmembrane regions

Thomas Nordahl Petersen et al.

NATURE METHODS (2011)

Article Multidisciplinary Sciences

Targeted Discovery of Glycoside Hydrolases from a Switchgrass-Adapted Compost Community

Martin Allgaier et al.

PLOS ONE (2010)

Article Biotechnology & Applied Microbiology

Isolation and Identification of Cellulose-Binding Proteins from Sheep Rumen Contents

Atsushi Toyoda et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2009)

Article Biochemical Research Methods

Infernal 1.0: inference of RNA alignments

Eric P. Nawrocki et al.

BIOINFORMATICS (2009)

Article Materials Science, Paper & Wood

Evidence for a novel mechanism of microbial cellulose degradation

David B. Wilson

CELLULOSE (2009)

Review Biochemical Research Methods

Plant biomass degradation by gut microbiomes: more of the same or something new?

Mark Morrison et al.

CURRENT OPINION IN BIOTECHNOLOGY (2009)

Article Biochemistry & Molecular Biology

FastTree: Computing Large Minimum Evolution Trees with Profiles instead of a Distance Matrix

Morgan N. Price et al.

MOLECULAR BIOLOGY AND EVOLUTION (2009)

Article Multidisciplinary Sciences

Gene-centric metagenomics of the fiber-adherent bovine rumen microbiome reveals forage specific glycoside hydrolases

Jennifer M. Brulc et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Biotechnology & Applied Microbiology

Characterization and synergistic interactions of Fibrobacter succinogenes glycoside hydrolases

Meng Qi et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Multidisciplinary Sciences

Stepwise formation of the bacterial flagellar system

Renyi Liu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2007)

Article Microbiology

Comparison of chitinolytic enzymes from an alkaline, hypersaline lake and an estuary

Gary R. LeCleir et al.

ENVIRONMENTAL MICROBIOLOGY (2007)

Article Biotechnology & Applied Microbiology

Intra- and interspecific comparisons of bacterial diversity and community structure support coevolution of gut microbiota and termite host

Y Hongoh et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2005)

Article Microbiology

Towards a genome-based taxonomy for prokaryotes

KT Konstantinidis et al.

JOURNAL OF BACTERIOLOGY (2005)

Article Biochemistry & Molecular Biology

ARB:: a software environment for sequence data

W Ludwig et al.

NUCLEIC ACIDS RESEARCH (2004)

Article Multidisciplinary Sciences

Extracellular polysaccharides mediate pilus retraction during social motility of Myxococcus xanthus

YN Li et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Review Agriculture, Dairy & Animal Science

Invited review:: Adhesion mechanisms of rumen cellulolytic bacteria

J Miron et al.

JOURNAL OF DAIRY SCIENCE (2001)