相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Sources of dynamic variability in NF-kappa B signal transduction: A mechanistic model
Janina Mothes et al.
BIOESSAYS (2015)
Noise Facilitates Transcriptional Control under Dynamic Inputs
Ryan A. Kellogg et al.
CELL (2015)
Anthracyclines induce double-strand DNA breaks at active gene promoters
Fan Yang et al.
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2015)
A resource for cell line authentication, annotation and quality control
Mamie Yu et al.
NATURE (2015)
Multiple facets of histone variant H2AX: a DNA double-strand-break marker with several biological functions
Valentina Turinetto et al.
NUCLEIC ACIDS RESEARCH (2015)
Distinct single-cell signaling characteristics are conferred by the MyD88 and TRIF pathways during TLR4 activation
Zhang Cheng et al.
SCIENCE SIGNALING (2015)
In vitro gamma-ray-induced inflammatory response is dominated by culturing conditions rather than radiation exposures
G. Babini et al.
SCIENTIFIC REPORTS (2015)
Distinct single-cell signaling characteristics are conferred by the MyD88 and TRIF pathways during TLR4 activation
Zhang Cheng et al.
SCIENCE SIGNALING (2015)
NF-κB and the cell cycle
Adeline C. Ledoux et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2014)
Modulation of Gene Expression Regulated by the Transcription Factor NF-κB/RelA
Xueling Li et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
Nucleosome loss facilitates the chemotactic response of macrophages
I. De Toma et al.
JOURNAL OF INTERNAL MEDICINE (2014)
A simple model of NF-κB dynamics reproduces experimental observations
Samuel Zambrano et al.
JOURNAL OF THEORETICAL BIOLOGY (2014)
Fold Change of Nuclear NF-κB Determines TNF-Induced Transcription in Single Cells
Robin E. C. Lee et al.
MOLECULAR CELL (2014)
Robust synchronization of coupled circadian and cell cycle oscillators in single mammalian cells
Jonathan Bieler et al.
MOLECULAR SYSTEMS BIOLOGY (2014)
High-Throughput Analysis of NF-κB Dynamics in Single Cells Reveals Basal Nuclear Localization of NF-κB and Spontaneous Activation of Oscillations
Samuel Zambrano et al.
PLOS ONE (2014)
Accurate information transmission through dynamic biochemical signaling networks
Jangir Selimkhanov et al.
SCIENCE (2014)
Switching of the Relative Dominance Between Feedback Mechanisms in Lipopolysaccharide-Induced NF-κB Signaling
Myong-Hee Sung et al.
SCIENCE SIGNALING (2014)
Live-cell imaging The cell's perspective
Richard Cole
CELL ADHESION & MIGRATION (2014)
Encoding and Decoding Cellular Information through Signaling Dynamics
Jeremy E. Purvis et al.
CELL (2013)
Standard fluorescent imaging of live cells is highly genotoxic
Jing Ge et al.
CYTOMETRY PART A (2013)
RNA splicing regulates the temporal order of TNF-induced gene expression
Shengli Hao et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Functional Roles of Pulsing in Genetic Circuits
Joe H. Levine et al.
SCIENCE (2013)
Direct observation of frequency modulated transcription in single cells using light activation
Daniel R. Larson et al.
ELIFE (2013)
Signal-dependent dynamics of transcription factor translocation controls gene expression
Nan Hao et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2012)
p53 Dynamics Control Cell Fate
Jeremy E. Purvis et al.
SCIENCE (2012)
An integrative clustering and modeling algorithm for dynamical gene expression data
Julia Sivriver et al.
BIOINFORMATICS (2011)
UV-induced histone H2AX phosphorylation and DNA damage related proteins accumulate and persist in nucleotide excision repair-deficient XP-B cells
Kyu-Seon Oh et al.
DNA REPAIR (2011)
Metabolic labeling of RNA uncovers principles of RNA production and degradation dynamics in mammalian cells
Michal Rabani et al.
NATURE BIOTECHNOLOGY (2011)
NF-κB addiction and its role in cancer: 'one size does not fit all'
M. M. Chaturvedi et al.
ONCOGENE (2011)
Mammalian Genes Are Transcribed with Widely Different Bursting Kinetics
David M. Suter et al.
SCIENCE (2011)
Entrainment of a Population of Synthetic Genetic Oscillators
Octavio Mondragon-Palomino et al.
SCIENCE (2011)
Substantial Histone Reduction Modulates Genomewide Nucleosomal Occupancy and Global Transcriptional Output
Barbara Celona et al.
PLOS BIOLOGY (2011)
Oscillatory control of signalling molecules
Pawel Paszek et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2010)
Noncooperative Interactions between Transcription Factors and Clustered DNA Binding Sites Enable Graded Transcriptional Responses to Environmental Inputs
Luca Giorgetti et al.
MOLECULAR CELL (2010)
Single-cell NF-κB dynamics reveal digital activation and analogue information processing
Savas Tay et al.
NATURE (2010)
A synchronized quorum of genetic clocks
Tal Danino et al.
NATURE (2010)
GFP-p65 Knock-in Mice as a Tool to Study NF-κB Dynamics In Vivo
Rossana De Lorenzi et al.
GENESIS (2009)
Rapid and sustained nuclear-cytoplasmic ERK oscillations induced by epidermal growth factor
Harish Shankaran et al.
MOLECULAR SYSTEMS BIOLOGY (2009)
Sustained Oscillations of NF-κB Produce Distinct Genome Scanning and Gene Expression Profiles
Myong-Hee Sung et al.
PLOS ONE (2009)
Kinetic control of negative feedback regulators of NF-κB/RelA determines their pathogen- and cytokine-receptor signaling specificity
Vincent F. -S. Shiha et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)
Pulsatile Stimulation Determines Timing and Specificity of NF-κB-Dependent Transcription
Louise Ashall et al.
SCIENCE (2009)
A Noisy Paracrine Signal Determines the Cellular NF-κB Response to Lipopolysaccharide
Timothy K. Lee et al.
SCIENCE SIGNALING (2009)
NF-κB and cancer -: identifying targets and mechanisms
Willscott E. Naugler et al.
CURRENT OPINION IN GENETICS & DEVELOPMENT (2008)
Kinetics of γ-H2AX Focus Formation Upon Treatment of Cells With UV Light and Alkylating Agents
Ori Staszewski et al.
ENVIRONMENTAL AND MOLECULAR MUTAGENESIS (2008)
Encoding NF-κB temporal control in response to TNF:: distinct roles for the negative regulators IκBα and A20
Shannon L. Werner et al.
GENES & DEVELOPMENT (2008)
Frequency-modulated nuclear localization bursts coordinate gene regulation
Long Cai et al.
NATURE (2008)
New regulators of NF-κB in inflammation
Sankar Ghosh et al.
NATURE REVIEWS IMMUNOLOGY (2008)
Single TNF α trimers mediating NF-κB activation:: stochastic robustness of NF-κB signaling
Tomasz Lipniacki et al.
BMC BIOINFORMATICS (2007)
Tunability and noise dependence in differentiation dynamics
Guerol M. Sueel et al.
SCIENCE (2007)
Mfuzz: A software package for soft clustering of microarray data
Lokesh Kumar et al.
BIOINFORMATION (2007)
Error propagation in relative real-time reverse transcription polymerase chain reaction quantification models:: The balance between accuracy and precision
Oddmund Nordgard et al.
ANALYTICAL BIOCHEMISTRY (2006)
H2AX phosphorylation within the G1 phase after UV irradiation depends on nucleotide excision repair and not DNA double-strand breaks
Thomas M. Marti et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Nuclear factor-κB in cancer development and progression
Michael Karin
NATURE (2006)
Stochastic regulation in early immune response
T Lipniacki et al.
BIOPHYSICAL JOURNAL (2006)
Transcriptional stochasticity in gene expression
T Lipniacki et al.
JOURNAL OF THEORETICAL BIOLOGY (2006)
Oscillations and variability in the p53 system
Naama Geva-Zatorsky et al.
MOLECULAR SYSTEMS BIOLOGY (2006)
A TNF-induced gene expression program under oscillatory NF-κB control -: art. no. 137
B Tian et al.
BMC GENOMICS (2005)
DNA labeling in living cells
RM Martin et al.
CYTOMETRY PART A (2005)
Circadian rhythms from multiple oscillators: Lessons from diverse organisms
D Bell-Pedersen et al.
NATURE REVIEWS GENETICS (2005)
Identification of direct genomic targets downstream of the nuclear factor-κB transcription factor mediating tumor necrosis factor signaling
B Tian et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2005)
Ultraviolet radiation-mediated damage to cellular DNA
J Cadet et al.
MUTATION RESEARCH-FUNDAMENTAL AND MOLECULAR MECHANISMS OF MUTAGENESIS (2005)
Oscillations in NF-κB signaling control the dynamics of gene expression
DE Nelson et al.
SCIENCE (2004)
Mathematical model of NF-κB regulatory module
T Lipniacki et al.
JOURNAL OF THEORETICAL BIOLOGY (2004)
The IκB-NF-κB signaling module:: Temporal control and selective gene activation
A Hoffmann et al.
SCIENCE (2002)
UV-induced DNA damage and repair: a review
RP Sinha et al.
PHOTOCHEMICAL & PHOTOBIOLOGICAL SCIENCES (2002)
Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
Jo Vandesompele et al.
GENOME BIOLOGY (2002)