☆ 4.5 Review

Cactus Endophytic Fungi and Bioprospecting for their Enzymes and Bioactive Molecules: A Systematic Review

CHEMISTRY & BIODIVERSITY (2023)

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Review Ecology

Current Scenario and Future Prospects of Endophytic Microbes: Promising Candidates for Abiotic and Biotic Stress Management for Agricultural and Environmental Sustainability

Uttpal Anand et al.

Summary: Globally, substantial research is being conducted on endophytic microbes to increase agricultural and environmental sustainability. Endophytic microbes, such as bacteria, actinomycetes, and fungi, inhabit plant tissues without causing harm and can regulate various host functions. They play a dominant role in nutrient cycling, biodegradation, and bioremediation, and have potential applications in industries. Endophytes can also synthesize bioactive compounds with high competence, making them promising candidates for new drugs. Biotechnological interventions with endophytes have played a pivotal role in crop improvement and could open new avenues in agricultural research and development.

MICROBIAL ECOLOGY (2023)

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Article Biochemistry & Molecular Biology

Chemical Characterization of Trichoderma spp. Extracts with Antifungal Activity against Cocoa Pathogens

Ivan Choez-Guaranda et al.

Summary: Ecuador, as a major cocoa producer, has experienced decreased productivity due to diseases. This study characterized the chemical compounds of Trichoderma species extracts that showed inhibition against cocoa pathogens. Solid-liquid extraction was used to obtain the extracts, and the inhibitory activity was found to be associated with alkaloids, lactones, quinones, flavonoids, triterpenes, and sterols. The extract of T. spirale (C10) exhibited the highest inhibitory effect, making it a potential biocontrol agent against witches' broom disease.

MOLECULES (2023)

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Article Plant Sciences

Endophytic Fusarium clavum confers growth and salt tolerance in Cucumis melo

Vineet Meshram et al.

Summary: In this study, the effects of root endophytic fungi from squirting cucumber on muskmelon under salt stress were investigated. The endophytic fungus F. clavum EeR24 exhibited the highest salt tolerance and was selected for further studies. Inoculation with F. clavum EeR24 significantly improved growth, biomass, and physiological traits of muskmelon under both controlled and saline conditions. The endophyte also decreased Na+ and Cl- absorption, increased K+ absorption, and enhanced antioxidant enzyme activity and phenolic content in response to salt stress.

ENVIRONMENTAL AND EXPERIMENTAL BOTANY (2023)

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Review Chemistry, Medicinal

Specialized metabolites of the fungal genus Phomopsis: Structures, bioactivities and biosynthesis

Meilu Zhao et al.

Summary: Fungi are valuable sources of bioactive compounds, with Phomopsis being a widely distributed genus that produces a variety of compounds with diverse biological activities. This review focuses on the chemical structures and biological activities of 183 specialized metabolites isolated from Phomopsis sp. between 2013 and 2022, as well as summarizing some biosynthetic pathways of typical components.

FITOTERAPIA (2023)

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Article Biotechnology & Applied Microbiology

Larvicidal activity against Aedes aegypti and molecular docking studies of compounds extracted from the endophytic fungus Aspergillus sp. isolated from Bertholletia excelsa Humn. & Bonpl

Inana F. Araujo et al.

Summary: The study of secondary metabolites produced by endophytic fungi is important for the discovery of new products for biotechnological and agrochemical applications. Extracts from the endophytic fungus Aspergillus sp. isolated from almonds showed oviposition deterrent and larvicidal activity against Aedes aegypti. The compound Aspergillol B was identified as a potent larvicide by inhibiting the acetylcholinesterase enzyme.

BIOTECHNOLOGY LETTERS (2022)

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Review Biotechnology & Applied Microbiology

Plant-associated endophytic fungi as potential bio-factories for extracellular enzymes: Progress, Challenges and Strain improvement with precision approaches

Divyangi Raghav et al.

Summary: There is a complex network of relations between endophytic fungi and their hosts, which affects the production of various bioactive compounds. Endophytic fungal enzymes have broad applications in biotransformation, bioremediation and industrial processes. However, there are limited reports on fungal endophytes that can meet the demand for industrially stable enzymes, and it is crucial to enhance their biosynthetic and secretory potential.

JOURNAL OF APPLIED MICROBIOLOGY (2022)

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Review Plant Sciences

Bixa orellana L. (Achiote, Annatto) as an antimicrobial agent: A scoping review of its efficiency and technological prospecting

Daniela Coelho dos Santos et al.

Summary: The present study systematically reviewed articles and patents related to the antimicrobial activity of B.orellana. The results suggest that this herbal medicine is effective against several fungi, Gram-positive and Gram-negative bacteria, being more effective against Gram-negative bacteria. However, further research is needed to determine the effectiveness of B.orellana preparations as antimicrobial agents and to expand their application at an industrial level.

JOURNAL OF ETHNOPHARMACOLOGY (2022)

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Article Plant Sciences

Cytotoxic Bromine- and Iodine-Containing Cytochalasins Produced by the Mangrove Endophytic Fungus Phomopsis sp. QYM-13 Using the OSMAC Approach

Yan Chen et al.

Summary: In this study, twelve new cytochalasins were isolated from a mangrove-derived fungus, including two iodinated cytochalasins that were reported for the first time. Some of these compounds exhibited significant cytotoxicity against cancer cell lines.

JOURNAL OF NATURAL PRODUCTS (2022)

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Article Microbiology

The plant microbiota signature of the Anthropocene as a challenge for microbiome research

Gabriele Berg et al.

Summary: This commentary discusses the specific signatures in microbiota affected by human activities and highlights the importance of microbiome research in addressing the challenges associated with anthropogenic-driven changes. The findings suggest that these changes in microbiota diversity and composition have implications for both plant health and planetary health, leading to dysbiosis, loss of resilience, and increased pathogen outbreaks.

MICROBIOME (2022)

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Article Environmental Sciences

Cladophialophora bantiana metabolites are efficient in the larvicidal and ovicidal control of Aedes aegypti, and Culex quinquefasciatus and have low toxicity in zebrafish embryo

Chinnasamy Ragavendran et al.

Summary: Mosquitoes' resistance to currently available public health insecticides is a serious threat to mosquito control efforts. This study identified Cladophialophora bantiana, an endophytic fungus, as a potential control agent for Aedes aegypti and Culex quinquefasciatus mosquitoes. The fungus exhibited strong mosquitocidal activity and low toxicity in zebrafish embryos.

SCIENCE OF THE TOTAL ENVIRONMENT (2022)

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Review Infectious Diseases

Overview of Bioactive Fungal Secondary Metabolites: Cytotoxic and Antimicrobial Compounds

Rafael Conrado et al.

Summary: This review discusses the importance of microorganisms as sources of natural compounds, particularly in pharmaceutical applications, and presents examples of bioactive secondary metabolites produced by fungi with pharmacological effects.

ANTIBIOTICS-BASEL (2022)

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Article Materials Science, Biomaterials

Extracellular Enzyme of Endophytic Fungi Isolated from Ziziphus spina Leaves as Medicinal Plant

Sumaiya Naeema Hawar

Summary: Endophytic fungi living in plants have shown strong biological activities and enzyme production. This study isolated different fungal strains from the medicinal plant Ziziphus spina, and quantified extracellular enzyme production using agar plate-based methods. Some of the strains exhibited high activity in secreting specific enzymes, suggesting potential applications in various fields.

INTERNATIONAL JOURNAL OF BIOMATERIALS (2022)

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Article Microbiology

Methods used for the study of endophytic fungi: a review on methodologies and challenges, and associated tips

Jefferson Brendon Almeida dos Reis et al.

Summary: Endophytic fungi are microorganisms that colonize plant tissues without causing disease symptoms. They have the potential to synthesize bioactive compounds for applications in agriculture, medicine, and biotechnology. However, studying the diversity and chemical potential of these fungi faces challenges such as inappropriate disinfection methods, culture medium composition, and misidentification.

ARCHIVES OF MICROBIOLOGY (2022)

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Article Biotechnology & Applied Microbiology

Cacti as low-cost substrates to produce L-asparaginase by endophytic fungi

Leticia Francisca da Silva et al.

Summary: This study aimed to select endophytic fungi capable of producing L-asparaginase and optimize its production using cacti as a substrate. Several endophytes were evaluated for their enzymatic potential, and the best producer was identified. The optimal conditions for enzyme production were determined, and Opuntia ficus-indica flour was found to be a cost-effective substrate for L-asparaginase production by the selected fungus.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2022)

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Review Soil Science

Brazilian scenario of inoculant production: A look at patents

Augusto Matias de Oliveira et al.

Summary: Technological advances have highlighted the importance of intellectual property rights, with patent granting being a widespread form of protection. Brazil is a leading country in the formulation of agricultural inoculants, and the number of patents for these formulations has increased over time. However, many patent applications for inoculants are still denied, possibly due to the low reproducibility of results. The use of endophytic microorganisms in patent applications shows a higher acceptance rate, as they are mainly protected from external factors. This growing trend reflects Brazil's increasing interest in the business and technological development of inoculants.

REVISTA BRASILEIRA DE CIENCIA DO SOLO (2022)

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Article Biotechnology & Applied Microbiology

Fungal endophytes from leaves of Avicennia marina growing in semi-arid environment as a promising source for bioactive compounds

A. M. A. Khalil et al.

Summary: Endophytic fungi residing inside plant tissues are proven to be a valuable source of bioactive natural products. In this study, seventeen isolates of endophytic fungi were obtained from the leaves of Avicennia marina, showing antimicrobial and antioxidant activities, with low cytotoxicity against tumor cell lines. Gas chromatography-mass spectrometry analysis of the most potent fungus extract confirmed the presence of bioactive compounds, suggesting these fungi as a potential source for drug discovery.

LETTERS IN APPLIED MICROBIOLOGY (2021)

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Article Microbiology

Fungal volatiles emitted by members of the microbiome of desert plants are diverse and capable of promoting plant growth

D. A. Camarena-Pozos et al.

Summary: This study characterized the chemical diversity of fungal volatile organic compounds (fVOCs) emitted by the mycobiota of agaves and cacti in arid and semi-arid environments, identifying 94 fVOCs classified into nine chemical classes. Terpenes showed the greatest chemical diversity. Experimental results showed that compounds like camphene and benzyl benzoate can improve plant growth and development, highlighting the untapped chemical diversity with promising biotechnological applications in fungal VOCs from desert plants.

ENVIRONMENTAL MICROBIOLOGY (2021)

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Article Agronomy

Metabarcoding reveals southern hemisphere fungal endophytes within wood of cultivated Proteaceae in Portugal

Duccio Migliorini et al.

Summary: Endophytic fungal hitch-hikers have potentially spread these latent pathogens via the global plant trade, with known pathogens of protea being found in Portuguese orchards. The sampling technique used in the study could be applied to other plant material and pathogens to reduce the spread of pathogens.

EUROPEAN JOURNAL OF PLANT PATHOLOGY (2021)

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Review Horticulture

Biotechnological overview of agriculturally important endophytic fungi

Bartholomew Saanu Adeleke et al.

Summary: The diverse aspects of biotechnology in endophytic studies involve the interactions between endophytes and plants, the synthesis of biomolecules, and the potential impact on plant growth, immunity, and protection from environmental stresses. Fungal endophytes play roles in nutrient acquisition, nitrogen fixation, and plant pathogen control, as well as contribute to plant growth through complex mechanisms. Metagenomic approaches provide insights into the structural diversity and functions of endophytes, which can be genetically manipulated for various agricultural and industrial applications.

HORTICULTURE ENVIRONMENT AND BIOTECHNOLOGY (2021)

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Article Plant Sciences

Transcriptome analysis of Arabidopsis reveals freezing-tolerance related genes induced by root endophytic fungus Piriformospora indica

Wei Jiang et al.

Summary: P. indica enhances freezing stress tolerance in host plants by regulating the expression of genes involved in lipid and ion transport, metabolic pathways, and phytohormone signaling. This fungus plays a crucial role in improving plant resilience to freezing stress.

PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS (2021)

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Article Chemistry, Medicinal

Biofabricated Fatty Acids-Capped Silver Nanoparticles as Potential Antibacterial, Antifungal, Antibiofilm and Anticancer Agents

Mohammad Azam Ansari et al.

Summary: The study successfully synthesized fatty acid capped silver nanoparticles using aqueous poly-herbal drug Liv52 extract as a reducing, dispersing and stabilizing agent. The nanoparticles exhibited potent antibacterial, antibiofilm, antifungal and anticancer activities, making them potential candidates for future nanoantibiotics. The research also highlighted the significant antiproliferative activity of the nanoparticles against cultured HCT-116 cells.

PHARMACEUTICALS (2021)

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Article Multidisciplinary Sciences

Potential mammalian species for investigating the past connections between Amazonia and the Atlantic Forest

Arielli Fabricio Machado et al.

Summary: The study suggests that Amazonia and the Atlantic Forest were connected through multiple dispersion routes in the past, and assesses the potential of mammal species for investigating these connections. The present-day distribution of mammal species in both regions indicates potential for studying past connections between the two forests.

PLOS ONE (2021)

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Article Environmental Sciences

Above-ground parts of white grapevine Vitis vinifera cv. Furmint share core members of the fungal microbiome

Daniel G. Knapp et al.

Summary: The study characterized the fungal microbiome of Furmint grapevines in the Tokaj wine region of Hungary, collecting samples from different seasons, sites, and plant parts. It was found that the different shoot parts of the Furmint grapevines in these regions harbor a common core group of fungal community.

ENVIRONMENTAL MICROBIOLOGY REPORTS (2021)

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Review Microbiology

Endophytic Fungi: Biological Control and Induced Resistance to Phytopathogens and Abiotic Stresses

Daniele Cristina Fontana et al.

Summary: Endophytic fungi play an important role in controlling plant diseases and alleviating abiotic stresses by forming a biological shield with their arsenal of molecules, making them valuable tools in agriculture. Their potential as biologically active substances producers make them a promising class of microorganisms for bioprospecting.

PATHOGENS (2021)

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Article Environmental Sciences

Increasing aridity shapes beta diversity and the network dynamics of the belowground fungal microbiome associated with Opuntia ficus-indica

Mahmoud Gargouri et al.

Summary: The effects of aridity on fungal communities associated with prickly pear cactus trees along an aridity gradient were studied. It was found that there were differences in beta diversity between rhizosphere and endosphere, with higher abundance of major phyla in rhizosphere. Arbuscular endomycorrhizal colonization was highest in humid climate and decreased under lower arid conditions, while increased aridity correlated with increased connectivity of soil microbial-root fungal networks in arid soils. Different fungal hubs in each bioclimatic zone sculpted the fungal microbiome network structure.

SCIENCE OF THE TOTAL ENVIRONMENT (2021)

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Article Microbiology

Higher turnover of endophytic fungal assemblages in the tissues of globose cactus Melocactus ernestii from Brazilian semi-arid biome

Alice Ferreira-Silva et al.

Summary: Endophytic fungi are highly diverse and compartmentalized in different tissues of the cactus Melocactus ernestii in the Brazilian Caatinga biome, with most taxa found in root tissues. The study revealed significant differences in species richness among fungal assemblages across plants and tissues, with some fungi shared exclusively between spines and stems, indicating potential interactions and resource dependency. The findings provide insights into the diversity and turnover of endophytic fungal assemblages in semi-arid environments.

SYMBIOSIS (2021)

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Article Multidisciplinary Sciences

Novel moisturized and antimicrobial hand gel based on zinc-aminoclay and Opuntia humifusa extract

Hien Thi Hoang et al.

Summary: The study formulated a novel hand gel based on ZnAC and Opuntia humifusa extract, demonstrating high antimicrobial activity and moisturizing effects with no toxicity or skin irritation. The hand gel effectively killed bacteria and increased skin moisture, making it suitable for use as a hand sanitizer in various settings.

SCIENTIFIC REPORTS (2021)

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Article Microbiology

Evaluation of the Antibacterial Activity of Crude Extracts Obtained From Cultivation of Native Endophytic Fungi Belonging to a Tropical Montane Rainforest in Colombia

Esteban Charria-Giron et al.

Summary: Research on bioactive secondary metabolite production from endophytic fungi isolated from medicinal plants shows promising potential for broad-spectrum antibacterial activities. Evaluation of crude organic extracts from two fungal endophytes demonstrated their bioactivities against Escherichia coli and Staphylococcus aureus, indicating the potential for new antibiotics production and the importance of preserving native habitats for future biotechnological and pharmaceutical applications.

FRONTIERS IN MICROBIOLOGY (2021)

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Article Biotechnology & Applied Microbiology

Antifungal efficacy of lauric acid and caprylic acid - Derivatives of virgin coconut oil against Candida albicans

Satya Tejaswi Akula et al.

Summary: This study found that the active ingredients of virgin coconut oil, lauric acid and caprylic acid, have potential antifungal activity against Candida albicans, with caprylic acid showing the highest antifungal potential. Further research and clinical evaluation are needed to determine their potential therapeutic use.

BIOMEDICAL AND BIOTECHNOLOGY RESEARCH JOURNAL (2021)

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Review Microbiology

Chemical Diversity of Secondary Metabolites Produced by Brazilian Endophytic Fungi

Bruno A. Ribeiro et al.

Summary: Endophytes are microorganisms living inside plant tissues without harming the host, and their wide biosynthetic capacity in producing bioactive secondary metabolites is related to gene activation. Brazilian biodiversity has inspired research on endophytic bioprospecting, with studies focusing on natural products from endophytic fungi cultures and classifying them into three chemical classes. Principal Component Analysis (PCA) and Hierarchical Clustering Analysis (HCA) were used to evaluate chemical variation in the Brazilian endophyte dataset, identifying main endophytic clusters and guiding researchers in designing microbial culture strategies.

CURRENT MICROBIOLOGY (2021)

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Article Microbiology

The potential of endophytic fungi isolated from cucurbit plants for biocontrol of soilborne fungal diseases of cucumber

Lin-Qi Huang et al.

MICROBIOLOGICAL RESEARCH (2020)

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Global ecosystem thresholds driven by aridity

Miguel Berdugo et al.

SCIENCE (2020)

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Review Microbiology

Patents on Endophytic Fungi Related to Secondary Metabolites and Biotransformation Applications

Daniel Torres-Mendoza et al.

JOURNAL OF FUNGI (2020)

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Review Microbiology

Patents on Endophytic Fungi for Agriculture and Bio- and Phytoremediation Applications

Humberto E. Ortega et al.

MICROORGANISMS (2020)

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Decomposition of Organic Chemical Components in Wood by Tropical Xylaria Species

Takashi Osono

JOURNAL OF FUNGI (2020)

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Larvicidal and histopathology effect of endophytic fungal extracts of Aspergillus tamarii against Aedes aegypti and Culex quinquefasciatus

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HELIYON (2020)

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Igor Jerkovic et al.

MOLECULES (2019)

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Association between dipsacus saponin VI level and diversity of endophytic fungi in roots of Dipsacus asperoides

Anhui Gong et al.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2019)

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Article Plant Sciences

Ethnobotany of native cacti in the northeast region of Brazil: can traditional use influence availability?

Aliza Maria de Lima-Nascimento et al.

ACTA BOTANICA BRASILICA (2019)

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Review Microbiology

A Review of the Microbial Production of Bioactive Natural Products and Biologics

Janette Pham et al.

FRONTIERS IN MICROBIOLOGY (2019)

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A highly diverse fungal community associated with leaves of the mangrove plant Acanthus ilicifolius var. xiamenensis revealed by isolation and metabarcoding analyses

Wei-Chiung Chi et al.

PEERJ (2019)

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Root endophytic fungus Piriformospora indica improves drought stress adaptation in barley by metabolic and proteomic reprogramming

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A new phthalide from the endophytic fungus Xylaria sp GDG-102

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The potential of compounds isolated from Xylaria spp. as antifungal agents against anthracnose

Luciana M. Elias et al.

BRAZILIAN JOURNAL OF MICROBIOLOGY (2018)

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Article Biochemistry & Molecular Biology

Antifungal activities of cytochalasins produced by Diaporthe miriciae, an endophytic fungus associated with tropical medicinal plants

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CANADIAN JOURNAL OF MICROBIOLOGY (2018)

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Elhussein F. Mourad et al.

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Bezerromycetales and Wiesneriomycetales ord. nov (class Dothideomycetes), with two novel genera to accommodate endophytic fungi from Brazilian cactus

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MYCOLOGICAL PROGRESS (2017)

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Dibenzo-α-pyrones: a new class of larvicidal metabolites against Aedes aegypti from the endophytic fungus Hyalodendriella sp Ponipodef12

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PEST MANAGEMENT SCIENCE (2017)

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New endophytic Toxicocladosporium species from cacti in Brazil, and description of Neocladosporium gen. nov.

Jadson D. P. Bezerra et al.

IMA FUNGUS (2017)

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Article Integrative & Complementary Medicine

Antibacterial and cytotoxic cytochalasins from the endophytic fungus Phomopsis sp harbored in Garcinia kola (Heckel) nut

Jean-Bosco Jouda et al.

BMC COMPLEMENTARY AND ALTERNATIVE MEDICINE (2016)

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Camila R. Carvalho et al.

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The Cacti Microbiome: Interplay between Habitat-Filtering and Host-Specificity

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Mourad Ouzzani et al.

SYSTEMATIC REVIEWS (2016)

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Article Microbiology

Diversity and antifungal activity of the endophytic fungi associated with the native medicinal cactus Opuntia humifusa (Cactaceae) from the United States

Alice F. Silva-Hughes et al.

MICROBIOLOGICAL RESEARCH (2015)

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Article Parasitology

Neem oil increases the efficiency of the entomopathogenic fungus Metarhizium anisopliae for the control of Aedes aegypti (Diptera: Culicidae) larvae

Simone A. Gomes et al.

PARASITES & VECTORS (2015)

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Article Biochemistry & Molecular Biology

Bioactive Secondary Metabolites from Phomopsis sp., an Endophytic Fungus from Senna spectabilis

Vanessa Mara Chapla et al.

MOLECULES (2014)

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Article Microbiology

Fungal endophytes from cactus Cereus jamacaru in Brazilian tropical dry forest: a first study

Jadson D. P. Bezerra et al.

SYMBIOSIS (2013)

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Maria Swiontek Brzezinska et al.

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Article Multidisciplinary Sciences

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Fernando T. Maestre et al.

SCIENCE (2012)

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Article Biotechnology & Applied Microbiology

Richness of endophytic fungi isolated from Opuntia ficus-indica Mill. (Cactaceae) and preliminary screening for enzyme production

J. D. P. Bezerra et al.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2012)

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Clelia Altieri et al.

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Chitinolytic activity of endophytic Streptomyces and potential for biocontrol

M. C. Quecine et al.

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Biological control of phytopathogenic fungi by fatty acids

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James D. Mauseth

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