4.5 Review

Virus-derived small RNAs: molecular footprints of host-pathogen interactions

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Biochemistry & Molecular Biology

One Loop to Rule Them All: The Ping-Pong Cycle and piRNA-Guided Silencing

Benjamin Czech et al.

TRENDS IN BIOCHEMICAL SCIENCES (2016)

Article Biotechnology & Applied Microbiology

The germline of the malaria mosquito produces abundant miRNAs, endo-siRNAs, piRNAs and 29-nt small RNAs

Leandro Castellano et al.

BMC GENOMICS (2015)

Review Biochemistry & Molecular Biology

From guide to target: molecular insights into eukaryotic RNA-interference machinery

Jonathan J. Ipsaro et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)

Article Biochemistry & Molecular Biology

FDF-PAGE: a powerful technique revealing previously undetected small RNAs sequestered by complementary transcripts

C. Jake Harris et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Biochemistry & Molecular Biology

Distinct sets of PIWI proteins produce arbovirus and transposon-derived piRNAs in Aedes aegypti mosquito cells

Pascal Miesen et al.

NUCLEIC ACIDS RESEARCH (2015)

Article Biochemistry & Molecular Biology

Sequence-independent characterization of viruses based on the pattern of viral small RNAs produced by the host

Eric Roberto Guimaraes Rocha Aguiar et al.

NUCLEIC ACIDS RESEARCH (2015)

Review Immunology

RNA degradation in antiviral immunity and autoimmunity

Rachel E. Rigby et al.

TRENDS IN IMMUNOLOGY (2015)

Review Biochemistry & Molecular Biology

From guide to target: molecular insights into eukaryotic RNA-interference machinery

Jonathan J. Ipsaro et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)

Article Cell Biology

Piwi Proteins and piRNAs in Mammalian Oocytes and Early Embryos

Elke F. Roovers et al.

CELL REPORTS (2015)

Article Biochemistry & Molecular Biology

The Discovery, Distribution, and Evolution of Viruses Associated with Drosophila melanogaster

Claire L. Webster et al.

PLOS BIOLOGY (2015)

Article Biotechnology & Applied Microbiology

Diagnosis and discovery of fungal viruses using deep sequencing of small RNAs

Eeva J. Vainio et al.

JOURNAL OF GENERAL VIROLOGY (2015)

Article Virology

RNase L Targets Distinct Sites in Influenza A Virus RNAs

Daphne A. Cooper et al.

JOURNAL OF VIROLOGY (2015)

Article Microbiology

Nonsense-Mediated Decay Serves as a General Viral Restriction Mechanism in Plants

Damien Garcia et al.

CELL HOST & MICROBE (2014)

Article Microbiology

The Host Nonsense-Mediated mRNA Decay Pathway Restricts Mammalian RNA Virus Replication

Giuseppe Balistreri et al.

CELL HOST & MICROBE (2014)

Article Biochemistry & Molecular Biology

Biases in small RNA deep sequencing data

Carsten A. Raabe et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biochemistry & Molecular Biology

Ribonuclease L and metal-ion-independent endoribonuclease cleavage sites in host and viral RNAs

Daphne A. Cooper et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biochemistry & Molecular Biology

Induction and suppression of tick cell antiviral RNAi responses by tick-borne flaviviruses

Esther Schnettler et al.

NUCLEIC ACIDS RESEARCH (2014)

Review Biotechnology & Applied Microbiology

To be or not to be a piRNA: genomic origin and processing of piRNAs

Adrien Le Thomas et al.

GENOME BIOLOGY (2014)

Article Biotechnology & Applied Microbiology

Knockdown of piRNA pathway proteins results in enhanced Semliki Forest virus production in mosquito cells

Esther Schnettler et al.

JOURNAL OF GENERAL VIROLOGY (2013)

Article Virology

RNA Interference Targets Arbovirus Replication in Culicoides Cells

Esther Schnettler et al.

JOURNAL OF VIROLOGY (2013)

Article Multidisciplinary Sciences

Dicer-2 Processes Diverse Viral RNA Species

Leah R. Sabin et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

RNA Interference Functions as an Antiviral Immunity Mechanism in Mammals

Yang Li et al.

SCIENCE (2013)

Article Multidisciplinary Sciences

Antiviral RNA Interference in Mammalian Cells

P. V. Maillard et al.

SCIENCE (2013)

Article Microbiology

Cytoplasmic Viruses: Rage against the (Cellular RNA Decay) Machine

Stephanie L. Moon et al.

PLOS PATHOGENS (2013)

Review Biotechnology & Applied Microbiology

Application of next-generation sequencing technologies in virology

Alan D. Radford et al.

JOURNAL OF GENERAL VIROLOGY (2012)

Article Biochemistry & Molecular Biology

Fossil Rhabdoviral Sequences Integrated into Arthropod Genomes: Ontogeny, Evolution, and Potential Functionality

Philippe Fort et al.

MOLECULAR BIOLOGY AND EVOLUTION (2012)

Article Multidisciplinary Sciences

Arbovirus-Derived piRNAs Exhibit a Ping-Pong Signature in Mosquito Cells

Nicolas Vodovar et al.

PLOS ONE (2012)

Review Cell Biology

Regulation of nonsense-mediated mRNA decay

Lulu Huang et al.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2012)

Review Biochemistry & Molecular Biology

New Insights into the Role of RNase L in Innate Immunity

Arindam Chakrabarti et al.

JOURNAL OF INTERFERON AND CYTOKINE RESEARCH (2011)

Review Biochemical Research Methods

RNAi pathways in parasitic protists and worms

Thiago Mafra Batista et al.

JOURNAL OF PROTEOMICS (2011)

Article Biochemistry & Molecular Biology

Phosphate and R2D2 Restrict the Substrate Specificity of Dicer-2, an ATP-Driven Ribonuclease

Elif Sarinay Cenik et al.

MOLECULAR CELL (2011)

Article Biochemistry & Molecular Biology

Coupled 5′ Nucleotide Recognition and Processivity in Xrn1-Mediated mRNA Decay

Martin Jinek et al.

MOLECULAR CELL (2011)

Review Cell Biology

Mechanisms of deadenylation-dependent decay

Chyi-Ying A. Chen et al.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2011)

Review Biochemistry & Molecular Biology

Modifications of Small RNAs and Their Associated Proteins

Young-Kook Kim et al.

Review Microbiology

Cytoplasmic Viral Replication Complexes

Johan A. den Boon et al.

CELL HOST & MICROBE (2010)

Article Biochemistry & Molecular Biology

Loqs and R2D2 act sequentially in the siRNA pathway in Drosophila

Joao Trindade Marques et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2010)

Article Multidisciplinary Sciences

RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana

Xian-Bing Wang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Multidisciplinary Sciences

Virus discovery by deep sequencing and assembly of virus-derived small silencing RNAs

Qingfa Wu et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Biochemistry & Molecular Biology

RNase L releases a small RNA from HCV RNA that refolds into a potent PAMP

Krishnamurthy Malathi et al.

Article Genetics & Heredity

Endogenous Viral Elements in Animal Genomes

Aris Katzourakis et al.

PLOS GENETICS (2010)

Review Cell Biology

Viruses and the cellular RNA decay machinery

Marta Maria Gaglia et al.

WILEY INTERDISCIPLINARY REVIEWS-RNA (2010)

Review Immunology

RNA-based antiviral immunity

Shou-Wei Ding

NATURE REVIEWS IMMUNOLOGY (2010)

Article Biochemistry & Molecular Biology

Specialized piRNA Pathways Act in Germline and Somatic Tissues of the Drosophila Ovary

Colin D. Malone et al.

Review Biochemistry & Molecular Biology

Origins and Mechanisms of miRNAs and siRNAs

Richard W. Carthew et al.

Review Cell Biology

The role of RNAi and microRNAs in animal virus replication and antiviral immunity

Jennifer L. Umbach et al.

GENES & DEVELOPMENT (2009)

Review Genetics & Heredity

Small silencing RNAs: an expanding universe

Megha Ghildiyal et al.

NATURE REVIEWS GENETICS (2009)

Article Biochemistry & Molecular Biology

Argonaute loading improves the 5' precision of both MicroRNAs and their miRNA* strands in flies

Herv Seitz et al.

CURRENT BIOLOGY (2008)

Article Multidisciplinary Sciences

MicroRNAs expressed by herpes simplex virus 1 during latent infection regulate viral mRNAs

Jennifer Lin Umbach et al.

NATURE (2008)

Article Biochemical Research Methods

Identification of microRNAs and other small regulatory RNAs using cDNA library sequencing

Markus Hafner et al.

METHODS (2008)

Review Immunology

Interferon-inducible antiviral effectors

Anthony J. Sadler et al.

NATURE REVIEWS IMMUNOLOGY (2008)

Article Multidisciplinary Sciences

Small self-RNA generated by RNase L amplifies antiviral innate immunity

Krishnamurthy Malathi et al.

NATURE (2007)

Review Genetics & Heredity

A call to arms: coevolution of animal viruses and host innate immune responses

Joao T. Marques et al.

TRENDS IN GENETICS (2007)

Article Biochemistry & Molecular Biology

A role for Piwi and piRNAs in germ cell maintenance and transposon silencing in zebrafish

Saskia Houwing et al.

Article Multidisciplinary Sciences

A slicer-mediated mechanism for repeat-associated siRNA 5′ end formation in Drosophila

Lalith S. Gunawardane et al.

SCIENCE (2007)

Article Biochemistry & Molecular Biology

Reconstitution, activities, and structure of the eukaryotic RNA exosome

Quansheng Liu et al.

Article Virology

RNase L plays a role in the antiviral response to West Nile virus

SV Scherbik et al.

JOURNAL OF VIROLOGY (2006)

Article Biochemistry & Molecular Biology

Concerted action of poly(A) nucleases and decapping enzyme in mammalian mRNA turnover

A Yamashita et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2005)

Article Biochemistry & Molecular Biology

Argonaute2 cleaves the anti-guide strand of siRNA during RISC activation

TA Rand et al.

Article Biochemistry & Molecular Biology

RNA degradation by the exosome is promoted by a nuclear polyade nylation complex

J LaCava et al.

Review Cell Biology

MicroRNA biogenesis: Coordinated cropping and dicing

VN Kim

NATURE REVIEWS MOLECULAR CELL BIOLOGY (2005)

Article Biochemistry & Molecular Biology

Decay of mRNAs targeted by RISC requires XRN1, the Ski complex, and the exosome

TI Orban et al.

Review Biochemistry & Molecular Biology

RNA interference and chemically modified small interfering RNAs

M Manoharan

CURRENT OPINION IN CHEMICAL BIOLOGY (2004)